Os01g0274500

From RiceWiki
Revision as of 04:34, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0274500| Description = Similar to Alpha-expansin 2| Version = NM_001049254.2 GI:297596532 GeneID:4325180| Length = 1402 bp| Definition = O...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0274500

Description

Similar to Alpha-expansin 2

Version

NM_001049254.2 GI:297596532 GeneID:4325180

Length

1402 bp

Definition

Oryza sativa Japonica Group Os01g0274500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:9524479..9525880

Sequence Coding Region

9524479..9524487,9525134..9525880

Expression

GEO Profiles:Os01g0274500

Genome Context

<gbrowseImage1> name=NC_008394:9524479..9525880 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:9524479..9525880 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaaaatggagttgctacgcttgctagctgttgccgccgtggccgcgatggccgcggaggtcgccgccggcggcgactccggctggagcagcggcagcgcgacgttctacggcggcagcgacgcgtcggggacgatgggtggcgcgtgcgggtacggcaacctgtacagcgccgggtacgggacgagcacggcggcgctgagcacggcgctgttcaacaacgggcagagctgcggcgcgtgcttcgaggtccggtgcggcggcggcggcagctgcctcgccggcaccgtggcggtgacggccaccaacctctgcccgcccaactacgcgctcgccggcgacgccggcgggtggtgcaacccgccgcggccgcacttcgacatggcggagccggcgttcaccaggatcgcgcaggcccgcgccggcgtggtgccggtgcagtaccggcgcgtggcgtgcgcgaagcagggcggcatccggttcaccatcaccggccactcctacttcaacctggtgctcgtcaccaacgtcggcggcgccggcgacgtgacggcggtgtcggtgaaggggtcgcggtcggggtggcaggccatgagccacaactggggcgccaactggcagaacggcgccaacctcgacggccagccgctctccttcagggtcaccgccagcgacggccgcaccgtcacctccgacaacgtcgccccctccggctggtccttcggccagaccttctccggcggccagttctag</cdnaseq>

Protein Sequence

<aaseq>MAKMELLRLLAVAAVAAMAAEVAAGGDSGWSSGSATFYGGSDAS GTMGGACGYGNLYSAGYGTSTAALSTALFNNGQSCGACFEVRCGGGGSCLAGTVAVTA TNLCPPNYALAGDAGGWCNPPRPHFDMAEPAFTRIAQARAGVVPVQYRRVACAKQGGI RFTITGHSYFNLVLVTNVGGAGDVTAVSVKGSRSGWQAMSHNWGANWQNGANLDGQPL SFRVTASDGRTVTSDNVAPSGWSFGQTFSGGQF</aaseq>

Gene Sequence

<dnaseqindica>1..9#656..1402#atggccaaagtaagagttcccaactttttctttctattaaccagaattaattaattagccattaatctctcctagattaatgttaaagtcaaggccttgtcgcagtttgttcagatgcaggcaggccctcaactggcccatttgccatgttaccaacttcactctcaactattatttcccgccaaatttcatcatttatacaaatatttccgaaatgctcctgtgatactgacaagtgggccaggatcaactcaatatccgaatttaacaaaacccaacatgcattattaacataaaacaaacaattaaccctgacgaaattttctgttagaaaaaacaagattcgttcgtacacgtagcacttgatcgtcactttcgtcagcacgttttccgatgcagtagcacatcccgacgacgtacggctatatatacagcttcagcttcctcgcacccttccactcccaatcaaattcagagtttagcaaagcctagtgctgcaattagcaggtaggtttgcactttgcagtaatctctagctaattagtactagtaatttatcttacattgactgtaaatataatgatgctttggcttcttcttcttgcatggtttatgtcactagtattgatgaaatgatcgttgcatcgtttttcagatggagttgctacgcttgctagctgttgccgccgtggccgcgatggccgcggaggtcgccgccggcggcgactccggctggagcagcggcagcgcgacgttctacggcggcagcgacgcgtcggggacgatgggtggcgcgtgcgggtacggcaacctgtacagcgccgggtacgggacgagcacggcggcgctgagcacggcgctgttcaacaacgggcagagctgcggcgcgtgcttcgaggtccggtgcggcggcggcggcagctgcctcgccggcaccgtggcggtgacggccaccaacctctgcccgcccaactacgcgctcgccggcgacgccggcgggtggtgcaacccgccgcggccgcacttcgacatggcggagccggcgttcaccaggatcgcgcaggcccgcgccggcgtggtgccggtgcagtaccggcgcgtggcgtgcgcgaagcagggcggcatccggttcaccatcaccggccactcctacttcaacctggtgctcgtcaccaacgtcggcggcgccggcgacgtgacggcggtgtcggtgaaggggtcgcggtcggggtggcaggccatgagccacaactggggcgccaactggcagaacggcgccaacctcgacggccagccgctctccttcagggtcaccgccagcgacggccgcaccgtcacctccgacaacgtcgccccctccggctggtccttcggccagaccttctccggcggccagttctag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0274500, RefSeq:Os01g0274500