Os01g0279000

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Revision as of 04:35, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0279000| Description = The start codon is not identified.| Version = NM_001049279.1 GI:115435971 GeneID:4326900| Length = 4135 bp| Definit...")
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Gene Name

Os01g0279000

Description

The start codon is not identified.

Version

NM_001049279.1 GI:115435971 GeneID:4326900

Length

4135 bp

Definition

Oryza sativa Japonica Group Os01g0279000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:9865686..9869820

Sequence Coding Region

9867301..9867531,9867735..9868064,9868619..9868852,9869283..9869723

Expression

GEO Profiles:Os01g0279000

Genome Context

<gbrowseImage1> name=NC_008394:9865686..9869820 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:9865686..9869820 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gatgacagacagctttgctttctccatttttttctttttcagaaatttctctgcggcggacgcctgattttcggtccggatgcgggttctctgttcctgtccaccgtgctcatagtggctcctctggtaggcctatgctgccaatgcatcacaaagatgaactcgatcagttcagagaaacaagttcttggcctccctgtcctcattgccaccatcgttcttggcctagcagatttggcattcctgctgatgacatcgagcagggacccggggatcgtgccgaggaacgcgcggccaccggagtcgtgcggcggcggcgacgaggagggggtcgccggagacgtgacgacgccgtcggcggagtgggtgacggcggcgagccctcacctccggctgccgcgcagcaaggacgtggtcgtgaacgggtgcgtcgtgaaggtgaagtactgcgacacgtgcctgctgtacaggccgccacgtgcctcccactgctccatctgcaacaactgcgtccgcaagttcgaccaccactgcccctgggtcggccagtgcatcggtctgcggaattaccggttcttcttcctgttcatctcgacgtcgaccctcctctgcgtctacgtcttcgtggtgtcctggctgaacatcgtggcgcataaggacggcaacgacggctcgctgctgaaatccatggccggtgagccgttgtccgtcgtgctgatcgtgtacaccttcgtctcggtgtggtttgtcggcggcctcaccgtgttccacctctacctcatgagcacaaaccagacaacgtacgagaacttcagatataggtacgacaagaaggagaacccgtataacaggggtgctatatcgaacatagcagaggtgttctgcgctgggatcccgccgtcgatgaacaacttccggtcatgggtggcgccgccgccgctggaggagccggacgacgtcagcgggcagcttccgccgaggaacggggccgatctcaccggcggcgtgaaggagaaggtggacctggagatgggccgcaacggcggcatcatcccggcgatcttgcgggggctggactacgacgagatggagaagaacgatgtcagcgtgcatatcaaggatcggggagcggcaccggcagcgccggacccattcatggccggccggtggcacaacgaggactgtgagagtactccgacggcggtgagccaccatgtaaattcagaacgattatga</cdnaseq>

Protein Sequence

<aaseq>DDRQLCFLHFFLFQKFLCGGRLIFGPDAGSLFLSTVLIVAPLVG LCCQCITKMNSISSEKQVLGLPVLIATIVLGLADLAFLLMTSSRDPGIVPRNARPPES CGGGDEEGVAGDVTTPSAEWVTAASPHLRLPRSKDVVVNGCVVKVKYCDTCLLYRPPR ASHCSICNNCVRKFDHHCPWVGQCIGLRNYRFFFLFISTSTLLCVYVFVVSWLNIVAH KDGNDGSLLKSMAGEPLSVVLIVYTFVSVWFVGGLTVFHLYLMSTNQTTYENFRYRYD KKENPYNRGAISNIAEVFCAGIPPSMNNFRSWVAPPPLEEPDDVSGQLPPRNGADLTG GVKEKVDLEMGRNGGIIPAILRGLDYDEMEKNDVSVHIKDRGAAPAAPDPFMAGRWHN EDCESTPTAVSHHVNSERL</aaseq>

Gene Sequence

<dnaseqindica>1616..1846#2050..2379#2934..3167#3598..4038#tttagggtcagtcttggatctcgaagtatggtgttgagtgtccttcctttttttggaaaagcaaggaataattcagattttgagtgtatttacagatttttaattaaccattcacaattgctagtagctgctatcataagtttggacaacctaaggctaatataataacctccaccaatcttagagcacaagtgcacaaccctctaaacctaccagataaaaatcaacaaacttgaaacccattatatcgaatcatgtcgacagaatcatccagttgttgccacttgccaggtgattgggtaatcaacaggagctatacaagattacaagtggaggctactgattgaatttatcccaaaaagttttgcccacagaggattaattagttgcagttgatctcttcgatcaaaactagggccgtttgtcttcagcctaattgcccaccacccgtgtccaaattaagctcaaatcacatgggctaaaagcatggaaaccaaacatttacatatgagcgactactaattttgtgaagggtttaaatatttaaattagatctggtcctgcaagtcccgcaaattgtaggattaattgggcaaagatagtactgcccaaagcatcaatccaatatcaaaatcaagatcatgatctccaaaaaatggaaaagattaaacgttagttgttggcacgtactaccgtgggctctgcttcaattttgtttcgattatttttgtagactaagtcacgtacgtgcagaccatgacctgctctcccaacatttgcaatatttgacgaatttaatttttccgagccctctctaaaattgtctgatttggatcagagcaaagaaaaaaagatagtattatcatagtaaacgatatcacatttcctgaaaacagaaaggagattgcagtttttctctgtgaaacaaaattaataaactcgttaattttctctaatcagatttttttttggcgaaataataagctctgatgagtgattggctaggtgggagagaatatttgaacgtgaaggcgggctagtgcaccgaccgacaggtgggccacaatctacccgcgccggccaaatggatccaccctgtcgcagcgccagtgcaggcgggcacgttgggtgtgtagccggcaggtagccagcccggtcgttaagcctagcttcgtctcgtttccaacactttcccgcggaaagaaaaaaaaaagaaaaaacagagcacgagagagctggagaagccatggccatggcaggaaggcgatgagaaagagataggaagctgacctgcctcttcgtcggtcatggccgcgttgtgacggcgccggcggccggaggacgggacgaagctacgcgcgctgcggcggcggcggcgatcgactgctggtgttgatcaggattcaagggagagaaagatagattgttcatgggggagccaaaccagaggaggttgtaccaagtctggcagggaagcaacgtacgacacgatacgatcatctcgcctctctcttccttccattacttctctttgaaaatcttcttgcaacctgcaatttttgttgtgataatccttgtgaaattcagatcaatattttttttgtttacactttgagatgacagacagctttgctttctccatttttttctttttcagaaatttctctgcggcggacgcctgattttcggtccggatgcgggttctctgttcctgtccaccgtgctcatagtggctcctctggtaggcctatgctgccaatgcatcacaaagatgaactcgatcagttcagagaaacaagttcttggcctccctgtcctcattgccaccatcgttcttggcctagcagtaagtcacaaattctgaaattcagcaatcatcaccactaactacagctgtttatttgtctgaataatctgtcacaactgctcgtgttttttcttgtctgaataatctgtcacaactgctcatgctttttttttgtctgaataattgtaacacaacagctcatgtttttttcttcccctttcatggatcaatttcgagttcaggatttggcattcctgctgatgacatcgagcagggacccggggatcgtgccgaggaacgcgcggccaccggagtcgtgcggcggcggcgacgaggagggggtcgccggagacgtgacgacgccgtcggcggagtgggtgacggcggcgagccctcacctccggctgccgcgcagcaaggacgtggtcgtgaacgggtgcgtcgtgaaggtgaagtactgcgacacgtgcctgctgtacaggccgccacgtgcctcccactgctccatctgcaacaactgcgtccgcaagttcgaccaccactgcccctgggtcggccagtgcatcggtctggtgagcaccatactgttactgatgtagtactgtacattattaagctgatatattgaattactgaaacaaattatttacttcatgcttcgaaaaacaagtttccagctatttcaccggattacttaaacgaattatttacttcaagcattaaaaaataagtttgggggtttgctgaaagtacagtgggctcctctgcctctgcccttccttgctattttttttcctttttaagtagcctttttccttagtatcagtcttctcctttttcggttttttctttctttattctccaataatggcaatatagccgttttgtgttgtgtaactaaactcttttttcttttgatatattgatgtgtaatcttttttcatgttcgtgaaaaaaataagttttcttaaaaaaacttcttctactgcgttgttttaaactatttgttaaatttatttttctaaatatttgattaatccctacaaccaagtagataatccactcgataaaataccaatgatgatatatttgatgagacggaggattgttttcgcattttgtgcagcggaattaccggttcttcttcctgttcatctcgacgtcgaccctcctctgcgtctacgtcttcgtggtgtcctggctgaacatcgtggcgcataaggacggcaacgacggctcgctgctgaaatccatggccggtgagccgttgtccgtcgtgctgatcgtgtacaccttcgtctcggtgtggtttgtcggcggcctcaccgtgttccacctctacctcatgagcacaaaccaggtaggccgcatcaagccatgttgttaaattgtttgttgagttctttcctgaagaaaatgcacgcaagaattgtcacaaagatgtccaatttcgcgacaaaattatcatgctcatcactacttagtgaccaggttgtcaaattctcgattctatcgtaccatttatgactttacgatcgaaggcctgaatctatgattatttacgattttatgattgtaaccttacctagaactatgattatttaccatttttaatatattttttaaaagaaacttccgattccgatctaggatcgagattttaatgaacataaattgcacattttgatttcaagtaaatcctgatctaggattgatttacttgaaatcgatacaaaatttgttctgaaaaaaatatttgtgatcactgatgtgatgcttctctactgcagacaacgtacgagaacttcagatataggtacgacaagaaggagaacccgtataacaggggtgctatatcgaacatagcagaggtgttctgcgctgggatcccgccgtcgatgaacaacttccggtcatgggtggcgccgccgccgctggaggagccggacgacgtcagcgggcagcttccgccgaggaacggggccgatctcaccggcggcgtgaaggagaaggtggacctggagatgggccgcaacggcggcatcatcccggcgatcttgcgggggctggactacgacgagatggagaagaacgatgtcagcgtgcatatcaaggatcggggagcggcaccggcagcgccggacccattcatggccggccggtggcacaacgaggactgtgagagtactccgacggcggtgagccaccatgtaaattcagaacgattatgacgtccccagatgcctctagttgttgcaaatttaaattattctttttgggcgttttggctctaaagcaagttggagaaatcagaaaaattgtaggtgt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0279000, RefSeq:Os01g0279000