Os01g0279800

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Revision as of 04:35, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0279800| Description = Similar to LRR protein| Version = NM_001049285.1 GI:115435983 GeneID:4326906| Length = 3973 bp| Definition = Oryza ...")
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Gene Name

Os01g0279800

Description

Similar to LRR protein

Version

NM_001049285.1 GI:115435983 GeneID:4326906

Length

3973 bp

Definition

Oryza sativa Japonica Group Os01g0279800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:9916549..9920521

Sequence Coding Region

9916830..9916899,9917442..9917513,9917609..9917680,9917871..9918014,9918877..9918948
,9920240..9920454

Expression

GEO Profiles:Os01g0279800

Genome Context

<gbrowseImage1> name=NC_008394:9916549..9920521 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:9916549..9920521 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgatggcggcggcctggtccccggcgctcgcggcggttttgctggcggcggccgtggcgtcggcgtccaactcggagggggacgcgctgtacgcgctgcggcgcgcgctggcggacccccggggcgtgctccagagctgggacccgaccctcgtcaacccctgcacctggttccacgtcacctgcgaccgcgccggccgcgtcacccgcctagacttgggtaactcaaatttgtcaggccatcttgctcctgaactgggacaccttgagcatctccaatatctagagctgtacaaaaacaatattcagggcactatcccagctgagctcgggagtctgaagaaccttattagcttggatctgtataacaacaacattactggaaccataccgaaagaacttggcaagctgagttccttagtattcttgcggcttaatgacaacagtttaaacggtccaatcccgagggatctggcaaaaatatctagtctcaaagtgatagatgtctcgaacaatgatctttgcggcacgattcctactagcgggccttttgagcatatacccctgaacaactttgacaaaaatccaaggttggaggggcccgagttgcaagggcttgcaacatatgacacaaactgctga</cdnaseq>

Protein Sequence

<aaseq>MAMAAAWSPALAAVLLAAAVASASNSEGDALYALRRALADPRGV LQSWDPTLVNPCTWFHVTCDRAGRVTRLDLGNSNLSGHLAPELGHLEHLQYLELYKNN IQGTIPAELGSLKNLISLDLYNNNITGTIPKELGKLSSLVFLRLNDNSLNGPIPRDLA KISSLKVIDVSNNDLCGTIPTSGPFEHIPLNNFDKNPRLEGPELQGLATYDTNC</aaseq>

Gene Sequence

<dnaseqindica>3623..3692#3009..3080#2842..2913#2508..2651#1574..1645#68..282#accttcactcactccgcccatttccccactcctcctcgcccgcatccggaaccctagctaagcttcgatggcgatggcggcggcctggtccccggcgctcgcggcggttttgctggcggcggccgtggcgtcggcgtccaactcggagggggacgcgctgtacgcgctgcggcgcgcgctggcggacccccggggcgtgctccagagctgggacccgaccctcgtcaacccctgcacctggttccacgtcacctgcgaccgcgccggccgcgtcacccgcctgtgagtccacctcccccccccccaccgccgccgccgcctcgccgactgagctggctactaccggccggttttgctccctccgttgtgtactgcttttgtttgcttcggtgtactgacctctgccgtagtattggaaatgcgagggctttgtgctaggccgctaatgcttaaatacagtttcaaatggatctgtgagttaattgacaccagttggtgaaagggatatggtgatttagttgttcattcggttctggtgagaccgtgatctactggcaaagaacgtgatttgtagattgtcatttaattttttttaaaagattttgttctgcccatgtggaatcatcgttgcaatacagtttgtctgtaatagtaaatgttactagttagtttgtagcaacagtaaagctactcactatataatatctactaattacttgcatgtagtagtttgatatcaatactttgcacgttagctatgtcatcatgtatttgcataattatgctgatgatagctataaatggaaccggggagtactccttgatcctgcatggaaatatcgctgatgcaagctatattctctatgtgcgcaattgatccacgtaaaaccaaaaagcaattatccaatgatgattgtcgcgttacccattggctgcacagttcgcacgtgagttactccgctagcacgccatgcatctcgggaacaatgcatcgcctgctaatggtcagcttaaaaaaagaaaaaaaaagttgtgtatccaatccgcatgtagcgaggatgtgtatgtagccaattaatacagatattatcatggggattaaatggaagtgtcaagatggaatgcgctggtcaaatgtgaacgagggagtacttagcaatcaaccaccctagatagagtcttactgctttcactgtacgactagatttttgtagtcttttatgtactccattgtagggatgcaagcaggctgactcacgagcctgcgtatgggacattttcgtgggctgacccataggttggcctgcaaaaatggcctatatgggggcttgcggaccggtccacttgcatccttccattggtttggacttagggtacctattatatatgtttgcttgctgaaggaaagaaattgattcatcgaagtggtttctttcgatgcagcgttcaccatgatgccattaccatacaagagatatattttgttatggttacctatgttcttggttcaattcattgtctttgtccatcttaacatttttctgatactttctaacaattttgtatcttgtagagacttgggtaactcaaatttgtcaggccatcttgctcctgaactgggacaccttgagcatctccaatatctgtaagtctttctacatattgatgcactttattttctgaagtgttaaaatgtagagttcattcagcaaaggttctctgatggcaatgatcaccgacactgataagctaaaaactcacatgtcctgttaagtttgcattacatatggtcagcattcagcaacactgccaactgcttgtcatgtagaagttacagctggaatactatgttagacctagcttcctttctttcatcacttcttttttgaactcataaagcttcagcgctggatttgtaaagtcatttaaacagctaggcttcatgaattaaactgcaaatatcatggcaaatggtgaaaaaactgggggaaaaatggaaactctcacattaccagaaatctagaacacaatttgtggttttcaacagttccttgtggcacgtaattattgacttactgttttgatcttctcacttcctgttatgtgattgcagcttccgtttcctagtggagtgaaactagagcattttcggagtgttattttaatgagcaagagagatgattctttttaagtaaaatgatgaactaaatctaaatgctgggaatctcagctatatcagaacatatgaatctgatatgagctgttcatatgcaaaataaacaccagcattgaacatggtccactataagacaatatattgtacagtttttccaacgaactgtttgttttcagtctcgtgatttgtgccaagactgcatcattaagtcttgtatccatttgatttataaaatatgctttggtcatccttaatttccgatgctattttactgcaattgagcttgacattcatgttagtgctctaactagtttttgaaaaattgttacagagagctgtacaaaaacaatattcagggcactatcccagctgagctcgggagtctgaagaaccttattagcttggatctgtataacaacaacattactggaaccataccgaaagaacttggcaagctgagttccttagtattcttgtgagtaactatacttattcttgtgattagctgtacttattcttttaagcaactatactttagttaacatatatccacttttgcaccattttgccacatatgcaagcatcactttctttttaattctttttatgctatggtacactggtacttttacgctatgttaatccttttatttttgtttctttaggcggcttaatgacaacagtttaaacggtccaatcccgagggatctggcaaaaatatctagtctcaaagtgatgtaagtgctcagttaacaatgctgtttcacataatttttatgttctgtacatattaatgatgatcttttatttgtctatctattcttgcttccagagatgtctcgaacaatgatctttgcggcacgattcctactagcgggccttttgagcatatacccctgaacaagtaagatctaaaagccttgttaccaatttattttacaattatgttgacttgttttttgcttttgcacatccaatgttgtgcttctgtataaatgagaggacttgagacattagccacactattccatcagccaaaaaccaaaacacccgaagtcataaaattgattactagtgaacctcggctaagtttttctgatttgacagtgcagctcatcttttgccataatactaatttggttgttatgtagcacatatctatgtaccagataaaaagagtgctctactcattttcttgaattctttatcttctaagagctactcatttttctgtggtatgccatagatccagagtttatttttttatttcttttccatatacgctaattgctgaatcagaattaatcgacacaacaaatgactcactaagtgccatattttgttttctatgtattgtggacttccattaattgtcgtcacttggcatatgcagaactcatcgccccagtttgcattgtttctaagccattgtttttctctctgcagctttgacaaaaatccaaggttggaggggcccgagttgcaagggcttgcaacatatgacacaaactgctgaacgtgccaatcagtccctgtcgctcgtgtgatatagatcaatagcaaattagctttatcggagtacctggtaaatgtgcaagcttggttgctttgcttgtacgagatactgcaagtaaagactaggctgcagctcaacccttgtagtgtagataatatttatcgcaagcctgaggccctcttgactgataatacctggtaatgtatggttgctttgatgaactaagtcttgatatttattgccagttttgatttagttgccctattataagggactggttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0279800, RefSeq:Os01g0279800