Os01g0281000

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Revision as of 04:35, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0281000| Description = Cyclin-like F-box domain containing protein| Version = NM_001049291.1 GI:115435995 GeneID:4326912| Length = 3791 bp|...")
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Gene Name

Os01g0281000

Description

Cyclin-like F-box domain containing protein

Version

NM_001049291.1 GI:115435995 GeneID:4326912

Length

3791 bp

Definition

Oryza sativa Japonica Group Os01g0281000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:10002908..10006698

Sequence Coding Region

10003624..10004349,10004752..10004831,10004992..10005170,10005327..10005401,10006128..10006315

Expression

GEO Profiles:Os01g0281000

Genome Context

<gbrowseImage1> name=NC_008394:10002908..10006698 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:10002908..10006698 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcttgccttggtggccaccttcgtcttggcctgcctcgtgttcttgtcgaagccatgcgcgcgtgagatgagattgttcctgtcgacgctgtgccaagaactcgccctcgcgctgctcgggttcctggccgggctccggctgctcggcggcgtcggcgccggcgcggcggccgagaccaccatgccgctgatgccgtccttcaagaggaagcgcgcggcggccgtggaggagggcggcggcggcggaggaggaggaggcggcgaggaggccggcggcgagccgtcggtgctcgacctgccggagctcgccatcgagtgcattctcgcgaggcttcccccctccgagctgcggaacatggccggcgtctgccgctccatgcgggagcgctgccgcggcgaccacctctgggagcgccacatgtcggagaagtggggcggcgtcctcggccacgccgcgagggaggagtggaggacgtacctcgcgtcggcggccgacacgggcggcgccgcggcgtcgtgctcgctcgccggcggcggcaggcaccggaggtggctcgccgcgctgtcctgcgtctgcccggtggtgtcctggatgcgtcccagggccgacggcggcagcggcggcaagtcggccggccccgtgctcgatgattcgatcatgtcgtggtatctgtccatggagagtggcaagttctggttcccggctcaggtctacaaccgtgagcatgggcatgttggattcatgatgtcatgctacgatgcagagctcagctatgatttccacagtgataccttccgtgcaaggtatccaccacacggacgacggaccgtagtcttggaggacggggtacactgggatagggtcagggcacctccagtagacactcacgcacatgatctccatgcctctgactgcttacacgaactccggccaggcgataacattgagatccaatggagaaggaacaaggaattcccctatggctggtggtatggagttgttggccacttggagtcatgtgatggaagtgagcacttttgtcggtgtcatcttagtgacactgttgttctggagttcaaccaatacacacctggttcaagatggaggcaggcgctggtgaaccggaaggaccacagggaagagggcaatgagggcgacggtttctacggtggaatcaggaagctccgcagcaaggatgagatctcaaagtggagacagttgtggccaacagacattcttgagtag</cdnaseq>

Protein Sequence

<aaseq>MLALVATFVLACLVFLSKPCAREMRLFLSTLCQELALALLGFLA GLRLLGGVGAGAAAETTMPLMPSFKRKRAAAVEEGGGGGGGGGGEEAGGEPSVLDLPE LAIECILARLPPSELRNMAGVCRSMRERCRGDHLWERHMSEKWGGVLGHAAREEWRTY LASAADTGGAAASCSLAGGGRHRRWLAALSCVCPVVSWMRPRADGGSGGKSAGPVLDD SIMSWYLSMESGKFWFPAQVYNREHGHVGFMMSCYDAELSYDFHSDTFRARYPPHGRR TVVLEDGVHWDRVRAPPVDTHAHDLHASDCLHELRPGDNIEIQWRRNKEFPYGWWYGV VGHLESCDGSEHFCRCHLSDTVVLEFNQYTPGSRWRQALVNRKDHREEGNEGDGFYGG IRKLRSKDEISKWRQLWPTDILE</aaseq>

Gene Sequence

<dnaseqindica>717..1442#1845..1924#2085..2263#2420..2494#3221..3408#ttgcagcttgggcttcctctcccccccggttgctgctgctgcagctgagcctccgttcttggaagcgagagagagggagggaggagggaggcaattggtgaggcttttggaggaggaaagggaagcttcgggccccagcatcctcctcctcctcttgctcactcaccacgctctcctctcaccaaactctctcttatctccttccaagatcccaaccccttttcttctttttttttgtttgttcttgttaggatcattttcttgatctttcaagctcagctccagcactccccccgttcgtttccagctgcagcagagatcttggttagttggatttttagcttccgtgttttttgagcgagttcttggttaattgctccaatccgagaaaaatcaccaagtgtcctttgcttccctccctccccccttgttttctgggcttcgattcgatcgaattcgaatccccgtcccaaatttatttattttcccacccctcctttgtgtaaaaagcgggttccatcgcgtcacccgcacggctcgtccgatcgaaaagcagcttgaagaagaaaaagtgagagttcttgattcgattctggtcgtagcagcagcagcagcagcgtcttcactggttcgttctttgtttatttataaggagcagcgcccaatccgagctgctgctcctccaccgcggcggcggcggcggcggtgtttgatcgatgcttgccttggtggccaccttcgtcttggcctgcctcgtgttcttgtcgaagccatgcgcgcgtgagatgagattgttcctgtcgacgctgtgccaagaactcgccctcgcgctgctcgggttcctggccgggctccggctgctcggcggcgtcggcgccggcgcggcggccgagaccaccatgccgctgatgccgtccttcaagaggaagcgcgcggcggccgtggaggagggcggcggcggcggaggaggaggaggcggcgaggaggccggcggcgagccgtcggtgctcgacctgccggagctcgccatcgagtgcattctcgcgaggcttcccccctccgagctgcggaacatggccggcgtctgccgctccatgcgggagcgctgccgcggcgaccacctctgggagcgccacatgtcggagaagtggggcggcgtcctcggccacgccgcgagggaggagtggaggacgtacctcgcgtcggcggccgacacgggcggcgccgcggcgtcgtgctcgctcgccggcggcggcaggcaccggaggtggctcgccgcgctgtcctgcgtctgcccggtggtgtcctggatgcgtcccagggccgacggcggcagcggcggcaagtcggccggccccgtgctcgatgattcgatcatgtcgtggtatctgtccatggagagtggcaagttctggttcccggctcaggtctacaaccgtgaggtataactttggaatcaagcaattttaattatcatccctttgcaattaatagctagcagtttcattattgtcaccaagcatgcaaattgggatgatttgtagtgtctgttaatgttcattgttgctagtgattaatctgttgatgatgaatttttggaaaggatactgaagttttataccttaatttggttccttgtttctgtaaatgcttatgttgatgatgaagtttggaaaggaatactgaagtttatatcttcatttggtttagcggatttgcgtctgagtgtccaattgggcataatctagatgagctcatttgtgtttctttaggatcttatcttcaaacttttagttatgtttgagcaaccggaaccaatcttgaggctttttgtttgtttgcagcatgggcatgttggattcatgatgtcatgctacgatgcagagctcagctatgatttccacagtgataccttccgtgcaaggtactaacttcttactggtttagtgattttagctgtggttgaatgtaaattgtggttatgtcctgatgattttgaggcgaacacatagcagcacaaagattttatatcctctgaagattgtatcttcaagttatctaactggccttaaaaacattgacaggtatccaccacacggacgacggaccgtagtcttggaggacggggtacactgggatagggtcagggcacctccagtagacactcacgcacatgatctccatgcctctgactgcttacacgaactccggccaggcgataacattgagatccaatggagaaggaacaaggaattcccctatggtatgttcccgagcacccaacaacgcaaatgctttggacagtgctagaagaaccaataaacatttccatatgggatatgctaatcttatctgatagtgatgaggagtattttaccagtggacagtgtgttcattcatgtgttgctatgtttggcaggctggtggtatggagttgttggccacttggagtcatgtgatggaagtgagcacttttgtcggtgtcatcttagtggtgagaatatctttaatcccagggactaaattatttgacttgactaataattacaaagttagttgcatatacatatgcctttttgatgccacgaccccatcaacatgccagcaaagtctaaagaatgttataaaacaacatcatggcctcagactcattttgctcattcattgattaaaagcaaagtgttacccttgaaatgatgactttagcttatgtttgaccttaatttcactttaagaaacattctatatcatgcattaatttaattggatttttgtctatccaatgttaagttccgctgttaggttgataacatagttggcatgtttgtgaacacagctgataatagtatatgtatgcaagtatgcaactacttcgttctataacaaaccatctatttgttagataaggcttagctttcattgacttacattaatatgttttttgtcattcatgatctgcatgttgttctttgaataaatataatctggttcttgaccaatgtcatgaggcaagagtcttactcctttccactgatacaagatgcttacaactaattgctttccttttgagtgaacaaattgaaacccgtatgagtttcaacttgaatcccagttaataataacaaagtataaatagctaagatttctattctgtcctacttcattttaccttaactctttctgaaacttacacaaaaccctgcataaacatttgtttcagacactgttgttctggagttcaaccaatacacacctggttcaagatggaggcaggcgctggtgaaccggaaggaccacagggaagagggcaatgagggcgacggtttctacggtggaatcaggaagctccgcagcaaggatgagatctcaaagtggagacagttgtggccaacagacattcttgagtagcaaggacagagattattattccactgttgttattcatcaagttgccaaattgatgctctccaattgctcattctgtattctgaaacctgacgaaaacgccacccatctcctccactcaagttgtatacacaaaggattggaacatggggtgacaaaatttggtagcttgggacacaattgtgaaacttactgtaaggcacggatgcacagattgcttctgtaaacgggcgttaactgaacatgtatcaagtctacagcattgtatgtgactgctgcagcctgtgcctctgcatgttgttgtagctgtagagcagaaagatcaaatgtaaattacattgttagctccaatttaatttacggcatttcaggatgccgtctcacgg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0281000, RefSeq:Os01g0281000