Os01g0282800

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Revision as of 04:35, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0282800| Description = Similar to Tubulin beta-5 chain (Beta-5 tubulin)| Version = NM_001049296.1 GI:115436005 GeneID:4326917| Length = 359...")
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Gene Name

Os01g0282800

Description

Similar to Tubulin beta-5 chain (Beta-5 tubulin)

Version

NM_001049296.1 GI:115436005 GeneID:4326917

Length

3597 bp

Definition

Oryza sativa Japonica Group Os01g0282800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:10147308..10150904

Sequence Coding Region

10147639..10148318,10148853..10149122,10149836..10150229

Expression

GEO Profiles:Os01g0282800

Genome Context

<gbrowseImage1> name=NC_008394:10147308..10150904 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:10147308..10150904 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagggagatcctgcacatccagggcgggcagtgtggcaaccagatcggctccaagttctgggaggtggtctgcgacgagcacggcatcgaccccaccggccgctacgtcggcacctccgacctccagctcgagcgcgtcaacgtctactacaatgaggcctcctgcggccgcttcgtgccccgcgccgtgctcatggacctcgagccgggtaccatggacagcgtccgcaccggcccctatggccagatcttccgccccgacaacttcgtcttcggccagtccggcgccggcaacaactgggccaaggggcactacaccgagggcgcggagctcatcgactctgtgctcgatgtcgtcaggaaggaggctgagaactgcgactgcctccaaggtttccaagtttgccattcccttggaggaggcactggatctggaatgggcacactcctgatctccaagatcagagaggagtaccctgaccggatgatgctcacattttctgtcttcccttcaccaaaggtctcagacacagttgttgagccttacaatgcaactctctctgtccatcagttggtggagaatgctgatgagtgcatggttcttgacaatgaggcactttatgacatctgcttccgcaccctcaagctgaccactcctagctttggcgacctgaaccacttgatcagtgctacaatgagtggagttacttgctgccttcgcttccctggtcaattgaactctgacctccgcaagctggccgtgaacttgatccctttccctcgcctgcacttcttcatggtgggctttgcgccactcacctcgcgtggctcgcagcagtatcgcgccctcactgtccctgagctcacccagcaaatgtgggacgccaagaacatgatgtgtgccgctgacccgcgccatggccgctacctcacggcctccgccatgttccgtggcaagatgagcaccaaggaggtggacgagcagatgatcaacgtccagaacaagaactcgtcctacttcgtcgagtggatccccaacaacgtgaagtccagcgtgtgcgacatcccgccgcgcggcctctccatggcgtccaccttcatcggcaactccacctccatccaggagatgttccgccgcgtgagcgagcagttcaccgccatgttcaggaggaaggccttcttgcattggtacaccggcgagggcatggacgagatggagttcaccgaggccgagagcaacatgaacgaccttgtctccgagtaccagcagtaccaggatgccaccgccgacgaggagggcgactacgaggacgaagaggagcaggtccccgaagacgagtaa</cdnaseq>

Protein Sequence

<aaseq>MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQL ERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWA KGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYP DRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT TPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSR GSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQ NKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRK AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEGDYEDEEEQVPEDE</aaseq>

Gene Sequence

<dnaseqindica>2587..3266#1783..2052#676..1069#gtgttcccccatttgcacacccaccccccccttcactcctctcctcttcggccgctgccccgctactcgcttctccgaggtaattacgacgggattttgctatcgttttggttgccggacctgggattgtgtggggttttggatctggttcgtggttttgcggtggatttggttggggtcgtggtggatttgagggattttttgttttgaggtttcgtttgctcgttctgtgagtattctttttgggcgaggttgcggatttgtgaggtgtttttaggttctcacagcaggagttcgggctttctttatgttagatctgtttttttggtagatttttagttgttttgcagtccactcggcttatttcggaaggttttatctgtgacattttgggatttgcttctcggatttgctctcatcgaacgtgctttcactgagaacatatactagattcgtttcggttcccgttttgctgcctttttgttcaaattttgagcttggatctgtgtcctgttttgaactttttgctctcaaaataccgggggatttgagcttttcaaaagcagatctggtcctccttccatttcaaaccaatcccccatcgttttctcgcacctaaccgcggaatctccttcgatttgcctccctcccacccgcaggcaccaaccggcagccatgagggagatcctgcacatccagggcgggcagtgtggcaaccagatcggctccaagttctgggaggtggtctgcgacgagcacggcatcgaccccaccggccgctacgtcggcacctccgacctccagctcgagcgcgtcaacgtctactacaatgaggcctcctgcggccgcttcgtgccccgcgccgtgctcatggacctcgagccgggtaccatggacagcgtccgcaccggcccctatggccagatcttccgccccgacaacttcgtcttcggccagtccggcgccggcaacaactgggccaaggggcactacaccgagggcgcggagctcatcgactctgtgctcgatgtcgtcaggaaggaggctgagaactgcgactgcctccaaggtcgattccttgctccactgttaaaatgttgcttgttaattatgttcgcgtgattcccgtgatgcgtgttagttcagatctgggtgaaaatagttccagatttggtagtgtcggctgcttttttttcttttcttttataagcatataatttatcatgtgatgctttagctttttagtagagtattttatttcctgtagtagctttttgttagctagtacgtgtcaccctgatataatggaactttaataatctataatgtagattccaaagtgctaattatttagtctttgctaaacttgttgtgcggtattattgaccattgtgatttacccaccttgtgctgtttacagcgagtgaggtctttactcttggtttagtgtttggtttctaataagactacttgttgctccagtgtaattttgttgtcatgtaacataagtgcggatagttttaagctggcaaacttgattgttgtggttacagttttttatgtttaaagctctgttcaaatgatttagcctgggattgttttattgttgtcagtctcttattaagctgtaaatcttattgctagcttgttattctgaaatatggagtagtttttaatccttgccataaaaccctaccatgaaatctatttcagcaatcctatggctattatgttagctagcactgcatcaccttatatatgttttgtcttttctgtaatcaggtttccaagtttgccattcccttggaggaggcactggatctggaatgggcacactcctgatctccaagatcagagaggagtaccctgaccggatgatgctcacattttctgtcttcccttcaccaaaggtctcagacacagttgttgagccttacaatgcaactctctctgtccatcagttggtggagaatgctgatgagtgcatggttcttgacaatgaggcactttatgacatctgcttccgcaccctcaagctgaccactcctagctgtaagttaattcttactctggttctaactagtggcatatgctgttcagattttcagagatgtatttggtagcttagtttcattccaatgtcaatgcttgctttggtagatccatgtatcttgtgtggatcttgctatccattatttgcagtccaatttgcatggtcccaagcccagcatgatctaccttgccttgtttaattatgaggccagttacatctgaatccccttgctggttcggtggtttaatttatttgcacccatcgtacagatcaagcatgtttcctgtacacattattgcatcataattcagtagctggcatgatagtgccacctactcctacataagggcatcaacttttcttaggaatgttgttgagtgcatcatgtactactatctttatttaaccataattatttttgattcatgttaaaaacttgcatctagtttctgtctgtactacagtctctgcctgtaaagttgctatagtgtttttatcctagtttggctaacctaaatttttcatatgaacagttggcgacctgaaccacttgatcagtgctacaatgagtggagttacttgctgccttcgcttccctggtcaattgaactctgacctccgcaagctggccgtgaacttgatccctttccctcgcctgcacttcttcatggtgggctttgcgccactcacctcgcgtggctcgcagcagtatcgcgccctcactgtccctgagctcacccagcaaatgtgggacgccaagaacatgatgtgtgccgctgacccgcgccatggccgctacctcacggcctccgccatgttccgtggcaagatgagcaccaaggaggtggacgagcagatgatcaacgtccagaacaagaactcgtcctacttcgtcgagtggatccccaacaacgtgaagtccagcgtgtgcgacatcccgccgcgcggcctctccatggcgtccaccttcatcggcaactccacctccatccaggagatgttccgccgcgtgagcgagcagttcaccgccatgttcaggaggaaggccttcttgcattggtacaccggcgagggcatggacgagatggagttcaccgaggccgagagcaacatgaacgaccttgtctccgagtaccagcagtaccaggatgccaccgccgacgaggagggcgactacgaggacgaagaggagcaggtccccgaagacgagtaatctcgccggagtttctcctgggatcccatcttgagtgtcgcctgttgtgtcctaccgtttgggcaatctttattattgtttcggtatgatgatgcttaattggttatgtgcttttgggtaatgtagtagtagtacaatgctgtgtggtccgtagcgccgctgatgctactgccactttaatccgtttcacctaccagaccatgtttggattcgtatgctatcgcatatgtttggggagtgtattggattcttgtactggttttgattgctcccgttgctgtctcttgtcttgctgcatcgatgagaatcttgctgctgctttgttgctgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0282800, RefSeq:Os01g0282800