Os01g0283600

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Revision as of 04:35, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0283600| Description = Similar to Cinnamoyl-CoA reductase (EC 1.2.1.44)| Version = NM_001049302.1 GI:115436017 GeneID:4327908| Length = 219...")
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Gene Name

Os01g0283600

Description

Similar to Cinnamoyl-CoA reductase (EC 1.2.1.44)

Version

NM_001049302.1 GI:115436017 GeneID:4327908

Length

2190 bp

Definition

Oryza sativa Japonica Group Os01g0283600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:10192330..10194519

Sequence Coding Region

10192330..10192450,10192691..10192845,10193175..10193357,10193571..10193923,10194100..10194264
,10194483..10194519

Expression

GEO Profiles:Os01g0283600

Genome Context

<gbrowseImage1> name=NC_008394:10192330..10194519 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:10192330..10194519 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtcaccggcgtcgagcagatggtgtgcgtgaccggcgccggtggcttcatcgggtcatggctggtgaaggagctcctccaccgcggatacgccgtgagggcagccgtgagagaccctgagggcagaaagaatgctcatttgcatgctctggagagagctaaaagaaggttgtccctccacagagctgatgtgttggactgcaacagccttcgtgctgcgttcaacttatgcgatggtgttttccacgtggcatcaccagtctcagatgaccctgaacttctgccaactgctatcgagggaacaaagaatgtcatcaatgctgctgcggacatgggcatcaagcgtgtggtgtttacttcgtcttatggtgctgcccatatgaaccctaacaggagatcagatcagactcttgatgagacttgttggagtgaccttgagttctgcaaacaaacacagaattggtactgctacgcgaagacggtggccgagaagacggcgacggaggaggcgtcgaagagaggtgtgcagctgttggtggtggtgcctgccgtcaccgtgggggagatgctgcagccgacgctgaacgccagcgtctacagggtggccacctacatgaggggcaccaagagtgcgtacccgaacgccgtcgccgcgtacgtcgacgtgcgcgacgtcgcccgcgcgcacgcgctggtgtacgagcaccccgacgcgcgtggccgctacctctgcatcggcagcgtgctgcaccggtccgagtttgttcgcttgcttagggagctcttcccccagtaccctatcaccaccaggtgtgaggacaacagtaagccaatggtgaaaccttaccaattctctgtacaaaggctggaggctttaggcatgcagttcactcctttgaaagagagcttgtacaagacagtgataagcttacaggacaagggtcacctaccagcaatctcacctcgttcagcccttcaaaagatgcagcaagccagcaacggcagtgagtga</cdnaseq>

Protein Sequence

<aaseq>MVTGVEQMVCVTGAGGFIGSWLVKELLHRGYAVRAAVRDPEGRK NAHLHALERAKRRLSLHRADVLDCNSLRAAFNLCDGVFHVASPVSDDPELLPTAIEGT KNVINAAADMGIKRVVFTSSYGAAHMNPNRRSDQTLDETCWSDLEFCKQTQNWYCYAK TVAEKTATEEASKRGVQLLVVVPAVTVGEMLQPTLNASVYRVATYMRGTKSAYPNAVA AYVDVRDVARAHALVYEHPDARGRYLCIGSVLHRSEFVRLLRELFPQYPITTRCEDNS KPMVKPYQFSVQRLEALGMQFTPLKESLYKTVISLQDKGHLPAISPRSALQKMQQASN GSE</aaseq>

Gene Sequence

<dnaseqindica>1..121#362..516#846..1028#1242..1594#1771..1935#2154..2190#atggtcaccggcgtcgagcagatggtgtgcgtgaccggcgccggtggcttcatcgggtcatggctggtgaaggagctcctccaccgcggatacgccgtgagggcagccgtgagagaccctggtgagtccgtccacgacaaccaccctcgtgaaagtagttttgaacatctacaaagtctctgaactctaaattaaatacaaagctaaatatacatgtagaaatccaatgaaatgtattttttaggaggaatatacccattgtattttttatgcgtctaatattgatatttcaaaaagacattgatgtgcagagttttaaaatttttattttaaatcctctattttgtttgtcttgctacagagggcagaaagaatgctcatttgcatgctctggagagagctaaaagaaggttgtccctccacagagctgatgtgttggactgcaacagccttcgtgctgcgttcaacttatgcgatggtgttttccacgtggcatcaccagtctcagatgaccctgttagttcaaaatttcaatatgcattatctaaaaatttgaatctctactccccctcccctaattttaccatactttaataagtaatgaggtgtattatattttgtagtgtaaaacttgatacctattgatacctttaggtaggtactaaaatttttaagtatcaaattcctgtaatcaggtttttttctcaaggacagtaaaatttctcctatttttcagcgtgatacaaaacaccgattgcaatacatcagcttaattttctagtactattaaacatatgatatatgatatcgatgttcattaatgaatcgaattatttcgaacgtaggaacttctgccaactgctatcgagggaacaaagaatgtcatcaatgctgctgcggacatgggcatcaagcgtgtggtgtttacttcgtcttatggtgctgcccatatgaaccctaacaggagatcagatcagactcttgatgagacttgttggagtgaccttgagttctgcaaacaaacacaggtccacacaaacagccagtgcaaatgtttgaaaccacaatgaccaatctacacaatatacacaacagttcgagcaattatataagaaattaatggagtacacagctaaaacatcagaactaattcacagaacaaagttaattaactgacagtgattcatcaatgaacgtaatacacttaaactaatgtacgtgtatataattaaataacatagaattggtactgctacgcgaagacggtggccgagaagacggcgacggaggaggcgtcgaagagaggtgtgcagctgttggtggtggtgcctgccgtcaccgtgggggagatgctgcagccgacgctgaacgccagcgtctacagggtggccacctacatgaggggcaccaagagtgcgtacccgaacgccgtcgccgcgtacgtcgacgtgcgcgacgtcgcccgcgcgcacgcgctggtgtacgagcaccccgacgcgcgtggccgctacctctgcatcggcagcgtgctgcaccggtccgagtttgttcgcttgcttagggagctcttcccccagtaccctatcaccaccaggtacgtaactcttgatgatcaatgtttgaaaaataccagacatgcttataagttaggatggatatggagtagatgatccaagtgtgcgggaaaatgtgaaaaataaaatgatgagaaaataaaatggtaaaacatctgcaaaaaaaaaaaaatcttattattgttaactgatccaggtgtgaggacaacagtaagccaatggtgaaaccttaccaattctctgtacaaaggctggaggctttaggcatgcagttcactcctttgaaagagagcttgtacaagacagtgataagcttacaggacaagggtcacctaccagcaatctcacctcgttcagccctgtgaatcatgattagatataaacgtaaaatttgaataaattgattgtgtatgcattgtgagaaggaacggagatgaatcctaatcatgaggcaatgattatcgttgtggtttttgtaaggactttaatgctgtgttcgttttgctatgaattagatgcatttctcttctcaattttctgaaaacgcaatgaataaacacctggcaattttcacttcagtcaaaagatgcagcaagccagcaacggcagtgagtga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0283600, RefSeq:Os01g0283600