Os01g0296200
| Gene Name |
Os01g0296200 |
|---|---|
| Description |
Virulence factor, pectin lyase fold family protein |
| Version |
NM_001049340.1 GI:115436093 GeneID:4326721 |
| Length |
1713 bp |
| Definition |
Oryza sativa Japonica Group Os01g0296200, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:10878001..10879713 |
| Sequence Coding Region |
10878001..10878684,10878792..10878827,10878922..10879713 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:10878001..10879713 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:10878001..10879713 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggagctcgccgcagccggtaggaccgccgccattgcgctgcttctcgcgcttgccttcgcgtcgagcttcattagcgccgccgatggcgcgaggagtgcccgccaccaccacgccaagcacgccaagcgcaacgccgcgcacccgccgtcgcaggcgccgggccccgcggcgaggcacgccccgggaccggcgaggcaccacggcgcgccggctcctcacccggggcggcgctctcccccggccccggcgccggccaacccgccgtcgtccgacccaatgcctggcggggcgccgagcgccgcccccgcggccggcgcggccaccgtgtacgacatcgtcaaggacttcggcgcggccggggacggcgtgacggacgacaccgacgcgctcaagacggcgtgggacaccgcgtgcgcggacgacggcgcgggcgtcgtgctggccgccgccggtcgctcgttcctgatccacaccaccgtcttcaccgggccctgccagggcagcgtcacgctgcaggtcgacgggacgatcgtcgcgccgagcgagccggcgacgtggccggcgaacaacaagcgcaactggctcgtcttctaccgcgccgacggcgtgtcgctcgtcggcgccggcctcatcgacggcaagggccagaaatggtgggatcttccctgcaagcctcacaaggggggaaacactcatggaccatgtgacagcccagtggcgatgcggttcgccatcagcaacaacgtgacggtgcgagggctcaaggtgcagaacagcccggagttccacttccggttcgacaactgcaacggcgtgcgcgtcgacggcctgtccatcagctcgccggcgctgagccccaacaccgacggcatccacgtcgagaacacctcggacgtcctcatcaccaacaccgtcgtctccaacggcgacgactgcgtctccatcggcgccggcacgctcaacgtccacatcgagaacgtcacctgcgggcccgggcacggcatcagcatcggcagcctggggaaggccgggaccaaggcgtgcgtggcgaacgtgacggtgcggaacgcggtgatccggcactcggacaacggcgtgcgcatcaagacgtggcagggcgggtccggctccgtgtcggcggtggcgttcgagaacgtgaggatggacgcggtgcgcaaccccatcatcatcgaccagtactactgcctctccaagagctgcgagaacgagaccaccgccgtgttcgtcaacggcgtctcctactccggcatccggggcacctacgacgtgcgcggcccgcccatccacttcggctgcagcgacgccgtgccgtgcaccaacatcacgctctccgacgtcgagctgctgccggcgtccggcgacaccgtcgacgagcccttctgctggaacgtctacggcaacgccgccacgcccaccgtgccgccggtgtcgtgcctcagctccggcttccccaactacaccgagaaaaaggacctccagtgttactga</cdnaseq> |
| Protein Sequence |
<aaseq>MELAAAGRTAAIALLLALAFASSFISAADGARSARHHHAKHAKR NAAHPPSQAPGPAARHAPGPARHHGAPAPHPGRRSPPAPAPANPPSSDPMPGGAPSAA PAAGAATVYDIVKDFGAAGDGVTDDTDALKTAWDTACADDGAGVVLAAAGRSFLIHTT VFTGPCQGSVTLQVDGTIVAPSEPATWPANNKRNWLVFYRADGVSLVGAGLIDGKGQK WWDLPCKPHKGGNTHGPCDSPVAMRFAISNNVTVRGLKVQNSPEFHFRFDNCNGVRVD GLSISSPALSPNTDGIHVENTSDVLITNTVVSNGDDCVSIGAGTLNVHIENVTCGPGH GISIGSLGKAGTKACVANVTVRNAVIRHSDNGVRIKTWQGGSGSVSAVAFENVRMDAV RNPIIIDQYYCLSKSCENETTAVFVNGVSYSGIRGTYDVRGPPIHFGCSDAVPCTNIT LSDVELLPASGDTVDEPFCWNVYGNAATPTVPPVSCLSSGFPNYTEKKDLQCY</aaseq> |
| Gene Sequence |
<dnaseqindica>1..684#792..827#922..1713#atggagctcgccgcagccggtaggaccgccgccattgcgctgcttctcgcgcttgccttcgcgtcgagcttcattagcgccgccgatggcgcgaggagtgcccgccaccaccacgccaagcacgccaagcgcaacgccgcgcacccgccgtcgcaggcgccgggccccgcggcgaggcacgccccgggaccggcgaggcaccacggcgcgccggctcctcacccggggcggcgctctcccccggccccggcgccggccaacccgccgtcgtccgacccaatgcctggcggggcgccgagcgccgcccccgcggccggcgcggccaccgtgtacgacatcgtcaaggacttcggcgcggccggggacggcgtgacggacgacaccgacgcgctcaagacggcgtgggacaccgcgtgcgcggacgacggcgcgggcgtcgtgctggccgccgccggtcgctcgttcctgatccacaccaccgtcttcaccgggccctgccagggcagcgtcacgctgcaggtcgacgggacgatcgtcgcgccgagcgagccggcgacgtggccggcgaacaacaagcgcaactggctcgtcttctaccgcgccgacggcgtgtcgctcgtcggcgccggcctcatcgacggcaagggccagaaatggtgggatcttccctgcaagcctcacaaggtatataagctcaactaattaattgcatctctactcttgcaatattggagtacatatctatctgaatctaatagctttccattttttttccttctttttttcttcaggggggaaacactcatggaccatgtgacagcccagtggtgagtggcctaacgcaacgaccttttaaccgtattaactgcctctgattagtgacagtgtaatcagtgctaagtacgatgctaatctttgcaggcgatgcggttcgccatcagcaacaacgtgacggtgcgagggctcaaggtgcagaacagcccggagttccacttccggttcgacaactgcaacggcgtgcgcgtcgacggcctgtccatcagctcgccggcgctgagccccaacaccgacggcatccacgtcgagaacacctcggacgtcctcatcaccaacaccgtcgtctccaacggcgacgactgcgtctccatcggcgccggcacgctcaacgtccacatcgagaacgtcacctgcgggcccgggcacggcatcagcatcggcagcctggggaaggccgggaccaaggcgtgcgtggcgaacgtgacggtgcggaacgcggtgatccggcactcggacaacggcgtgcgcatcaagacgtggcagggcgggtccggctccgtgtcggcggtggcgttcgagaacgtgaggatggacgcggtgcgcaaccccatcatcatcgaccagtactactgcctctccaagagctgcgagaacgagaccaccgccgtgttcgtcaacggcgtctcctactccggcatccggggcacctacgacgtgcgcggcccgcccatccacttcggctgcagcgacgccgtgccgtgcaccaacatcacgctctccgacgtcgagctgctgccggcgtccggcgacaccgtcgacgagcccttctgctggaacgtctacggcaacgccgccacgcccaccgtgccgccggtgtcgtgcctcagctccggcttccccaactacaccgagaaaaaggacctccagtgttactga</dnaseqindica> |
| External Link(s) |
