Os01g0299300

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Revision as of 04:36, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0299300| Description = Lambda integrase-like, N-terminal domain containing protein| Version = NM_001049347.2 GI:297596602 GeneID:4326728| L...")
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Gene Name

Os01g0299300

Description

Lambda integrase-like, N-terminal domain containing protein

Version

NM_001049347.2 GI:297596602 GeneID:4326728

Length

6176 bp

Definition

Oryza sativa Japonica Group Os01g0299300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:11017287..11023462

Sequence Coding Region

11017287..11018171,11020361..11021198,11023458..11023462

Expression

GEO Profiles:Os01g0299300

Genome Context

<gbrowseImage1> name=NC_008394:11017287..11023462 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:11017287..11023462 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaattgcaccttgcaaccttcatcaaataaacaagaagctaggtcgaactacacctcaaaaacaattcttttgagtgcacatacacatatggcatcagatccctcctccggccacactaatttctaccgatttgttcgccggtggctggcaaatccgctaggtcaccaccagcaccatcatctccggcgaagcaccagtactgggatctcatcatcaacctaccctaggatcatcccaagatgcccatcatcatcatcatcggcgcaagaccgggatcgccttcgagacaagacgatgatcctagatgtagaaggagggatcctaatgtcatcttctaccttcccttacttcatgcttgtggccatggaggcaggtggtttcctcaggggcttcatcatgctatgcgtccaccttgtcctgtggtgcctggcgccgctgctgccggaagaggtgaaattgaaggtcatggtgatggtgtgcttctttgggttgaaggagaagaaggtggctagggttgcgagggcggcgctgccgaagcacttcctagagggtgtaggaatggaagggcttgaggctgtgagaggggtgaaaagtgtggtaggggtgagcagggtgatccctagggttatggtgaaaccattcctggaagattacctaggtgtggatgtggttgtggggagagaggtgaagatggtaagaggtttttatgttggtttattggagaacatgagtgatggaaggttagagctggcagatctggaaggagaagaaatgatagggtttggaagcagctcaggatattctggccatgatcaccaccatcttttctcttggtgcaaggaggtttacctggtgactccagaagaaaaacgaaaatggtcacccttgccaagagaccagtaccccaagcccttggtcttccatgatggaaggctggccttcaggccaacctttcaagccaccctagccatgttaacatggctcccattttccctccccctcaccatcttcagaacactcatctttgtcaccctcccctaccctgtttctgtggcgatcggatccgtattcggagtcagaacccgtgtcatcaactcccctgttggtcaggccaaagctgatcacccaagaaacccaaaggggcacctctacgtgtgcaaccaccggacgctgctcgacccggtctacattgcagcgatgctcaacaagaaggtctcggccgtcacctacagcgtcagccgcctcagcgagtggatatcgccgatcccgaccatccggctgacccgggatcgcgacgaggaccggaggaggatggaggaggcgctgcggcggggcgacctggtggtctgccccgaggggacgacctgccgcgagccctacctcctccggttcagcccgctgtcgctggagctcgtcgacgaggtctacctggtggctctggtgaactggtccgacatgttctacggcaactccaccggaagaagcaagtgcctggacagcttctactacttcatgaatccgcgcccggcttacgatgtcgagttcatggagaaggtgccaaccaggatggtcgtggatggcaagacctgtgagagcaaacatgtggccaacatggtgcagggtgagattggtagagtgcttgggtttgaatgcaccaagttcacccgtgagaataagtacctggcgctggcaggaaatagaggggttgttgatgcaaaccagtga</cdnaseq>

Protein Sequence

<aaseq>MNCTLQPSSNKQEARSNYTSKTILLSAHTHMASDPSSGHTNFYR FVRRWLANPLGHHQHHHLRRSTSTGISSSTYPRIIPRCPSSSSSAQDRDRLRDKTMIL DVEGGILMSSSTFPYFMLVAMEAGGFLRGFIMLCVHLVLWCLAPLLPEEVKLKVMVMV CFFGLKEKKVARVARAALPKHFLEGVGMEGLEAVRGVKSVVGVSRVIPRVMVKPFLED YLGVDVVVGREVKMVRGFYVGLLENMSDGRLELADLEGEEMIGFGSSSGYSGHDHHHL FSWCKEVYLVTPEEKRKWSPLPRDQYPKPLVFHDGRLAFRPTFQATLAMLTWLPFSLP LTIFRTLIFVTLPYPVSVAIGSVFGVRTRVINSPVGQAKADHPRNPKGHLYVCNHRTL LDPVYIAAMLNKKVSAVTYSVSRLSEWISPIPTIRLTRDRDEDRRRMEEALRRGDLVV CPEGTTCREPYLLRFSPLSLELVDEVYLVALVNWSDMFYGNSTGRSKCLDSFYYFMNP RPAYDVEFMEKVPTRMVVDGKTCESKHVANMVQGEIGRVLGFECTKFTRENKYLALAG NRGVVDANQ</aaseq>

Gene Sequence

<dnaseqindica>5292..6176#2265..3102#1..5#atgaagttaattattgcattcaatttgcattaaaatagtaggcttagaataactattttttagaatatttcaagcacttgaaatcgggacaattttacacatataagtagcgccaccgttgttacataagcctacatgcatcaaaagccttaattttgataaagatacctaatggatatttgaaactaggcgttgtcagttttgaaatattctaagtgttgtttttgtgattcagatgaaacaatacaagatctatttttcgtttgtcattttgcaaagttcatatggcacgcgattcaaatagcttttggcctaccaccacctattagtttttctaatattggaatatggttgcaagatgtttcaaaaaggctaaagaatcttattttggttagagcaagtgctatgtgttgggcaatatggataagtcataatgacgtagtttttgagaaaacaaatgatctttcacctatgcaggtaatcttcacatctatgcatgtaatcttcaggggcacccattgaattcgattctaggctttgttgcaaaaggaggaggaacaacaccatataaaagcggtgtgccgtcttttggagacttctattggagatattcaccaagcatggatggaagtttactaataggatatatgcttgataatccacatatttactttatagttgtttcctttatagcatttactgctttatggtgaagttaacgagtaccacatccacattattgtaataattaatggatctgtgcatcacatgatgcaaggatttttattccattatctaaaaaataaattttgtatatacaaatcgatgaagttaattattgcattcaattgcattaaaatagtaggcttagaataactttttagaatatttcaaacacttgaaattgggacaattttacacatataagtagcgccacgttgttacataagcctatatgcatcaaaagccttaattttgataagatacctaatggacaattgaaacttaggcgttatcagttttgaaatattctaaaacctagctaggggcacataaatgaaacattaatattgaactcattcacttgatccattactcaacgcacttctcacctgttgagtaatgatcttaattaaatgagcccctctaaagtttgaggcaaattaattaacacattttgttcatcatctccgagctatatgtatcctcatgaaactgatctgctggtcattgaatcaaattaactttaatagataactaatgatttctcttcttttacccatagtttttagccaaccccaaatactttatcattgatgcttcacatgacatgatcaatcccgcaggttagatcaattgcatcagagtttatatgtttgttaaaaccttgctcaattagtacgtataagatagagtaaaacagttggactctatatatcacattaactctactttaaaagaagaaaataaattacccgtgaaacgacaaagggctggttaattagtagcacatgttaacaacaggtatgtacctcgattattttaggaaaaaaaagaatgcaaggttaattttgaataatattagagtaaatatattaataggaaggaggtagtgtgtacctcaatcgctcatgcttttaggtgaggggtcatcatcaattatgtttcttctaggaatgaacaaacaaagagagatcaagccggcctgcaccaaatatattaccttttcaattctgacactctcacaaaaagtattaccagaatggcgacatgctctgaccactgcgctaatgtatgaccagcaaccctggttaaattactgtcaattttggatctttcaccagcaggcacacagtgtgactttctgagcacagtgacgattattaattatcatatggtccttgcagtgataaataatggtcaactgcttgtcactttctctgtgtccacaagtggtgaatatggtaaacttgtatcatatatatctgtctttactgtccttagcaatgttttgtccttgactacttctgattaagggcttacgcgtaacgtaccctaatttgcattttacagccaaccaagcttaataagcaacagaatcaaactgtagcttgtttggtcaaatcaaaaccagtgatctcgatcagctaatcaatttgacatctgaacttatcttttagaaatagctcacaatcaagtcactatagctgcctacaagctttttgttgctcttatatatgcgtacggcggctgccctcttgcagttgcaccttgcaaccttcatcaaataaacaagaagctaggtcgaactacacctcaaaaacaattcttttgagtgcacatacacatatggcatcagatccctcctccggccacactaatttctaccgatttgttcgccggtggctggcaaatccgctaggtcaccaccagcaccatcatctccggcgaagcaccagtactgggatctcatcatcaacctaccctaggatcatcccaagatgcccatcatcatcatcatcggcgcaagaccgggatcgccttcgagacaagacgatgatcctagatgtagaaggagggatcctaatgtcatcttctaccttcccttacttcatgcttgtggccatggaggcaggtggtttcctcaggggcttcatcatgctatgcgtccaccttgtcctgtggtgcctggcgccgctgctgccggaagaggtgaaattgaaggtcatggtgatggtgtgcttctttgggttgaaggagaagaaggtggctagggttgcgagggcggcgctgccgaagcacttcctagagggtgtaggaatggaagggcttgaggctgtgagaggggtgaaaagtgtggtaggggtgagcagggtgatccctagggttatggtgaaaccattcctggaagattacctaggtgtggatgtggttgtggggagagaggtgaagatggtaagaggtttttatgttggtttattggagaacatgagtgatggaaggttagagctggcagatctggaaggagaagaaatgatagggtttggaagcagctcaggatattctggccatgatcaccaccatcttttctcttggtgcaaggttagatggcacatatgcatgcatgaattatatgattaatccttgttttgcctactgcataaattgcaagactcttgttagaaatatatactgaataggtcttcttcatttttttttatttttggttttcttgcatcaatttgatgtgttttaattgcaatagatctgttaactttattttcaacatgatatgcatgttctttgatatcttcttgaaataccgtagaaactttataattatccatcacatcataagttgggacttcacatattcatatacttcatccgtttcatattgtaagactttttggacttatctagattcatcgattaatgtatatatgttttctatatgtgtctagattcattaacatctatattaacatctatattaacatctatatgaatttgggtaatcctagaaagttttacattgtggaatggaggaataagtacttgtttgcataccacttgggatgggaatttggaaatgggtcaacatgttggaaatcattgacccaccgttgtcaactaaatcaagtaaaatgtacctttactagttcatgtcatgaaatttagttaaatatatatgaaccagtacttttagttgatttgcaaaactagggtgagtcaatataattaattctctccatccctgtacttaccaccaagataccaattgcattatccatgcatgaatcattaatttgtgcacatgttgtcatgttccctacaacaaagatatcatacatcagggagagagataggtttgacatcatgatgtcagacatatgcatgataaacttagaatataggaacccatatatatcatatatggtatggaattggtattctgaaactggagagcttaacttaccaccatgacaatcacttgtgcactaggaaaattatataataataattgaaactagaggcttcctcattgggatatactataatacagggtcgaacactcgatcttgaaaaaaataagctggctcgaaccacgtagcatgcaattaagcagcatcacattcacatgcattaaatccaatgaccacgaaacacatctacgtgatttagttaattcctgaatctaactcactgtagcttacacttcctacatcgttaaggggcatcttatatatatttgcataagttaggtaggatttttgtagcagctagtggtagttgaaaatggtcaaaggctcccataaattccaaatataagaatcttattcactataaatgcacgaatataatgcatcagccgccatataggaattaatatatataatcatccaaaaagaagaaagtacggtaccttgatggtagaaaggtggcatgaacttgcttgaacatctgaacactgaacggcaatgagctagctatatatagtactatagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcgccaactttagcttcgtaatattgcattttaattgcagttttgcccgtaagcttgaaaccagggaaaagggcaaaaacacacaaggagtagtttgatgaaatggtttagtctaacttgattataagtttatatgatctcatggtgcaagtaaccgatcacagttagcttgagaatcttattaatattgttagttgttacttggagggagtgaacaaatcattagctgtcaacacgctataggttctcttcattttcagtatcattaattctaaccagcagatattgacaaaaaaaatatttgttctgtttgggtgagagaattttatccaaatgtagggatatgaattgcaaatttgagaattcaaggatcaaggattaatctgtgagcatgaatagtcccttttagaaaaaggattgatagataacatgagtttgagagctgttttcatttcactgaaccatcaggtacatatcctgaattatctgtgataagtttgaacagttctgaattctagagacaagccaatatttgatagcagtagtttctcctaattctggaaattcattaattctaccaattttccatcagcgtgtgcagtaggaatttccaacttttgagagctattcattttcacttttcactttaatctgcaagttatttcaatgctgaataaacccagcatataatttaagccagtgggggattgggtgtgaaacataatccagtttcctttcttcacctgcaggaggtttacctggtgactccagaagaaaaacgaaaatggtcacccttgccaagagaccagtaccccaagcccttggtcttccatgatggaaggctggccttcaggccaacctttcaagccaccctagccatgttaacatggctcccattttccctccccctcaccatcttcagaacactcatctttgtcaccctcccctaccctgtttctgtggcgatcggatccgtattcggagtcagaacccgtgtcatcaactcccctgttggtcaggccaaagctgatcacccaagaaacccaaaggggcacctctacgtgtgcaaccaccggacgctgctcgacccggtctacattgcagcgatgctcaacaagaaggtctcggccgtcacctacagcgtcagccgcctcagcgagtggatatcgccgatcccgaccatccggctgacccgggatcgcgacgaggaccggaggaggatggaggaggcgctgcggcggggcgacctggtggtctgccccgaggggacgacctgccgcgagccctacctcctccggttcagcccgctgtcgctggagctcgtcgacgaggtctacctggtggctctggtgaactggtccgacatgttctacggcaactccaccggaagaagcaagtgcctggacagcttctactacttcatgaatccgcgcccggcttacgatgtcgagttcatggagaaggtgccaaccaggatggtcgtggatggcaagacctgtgagagcaaacatgtggccaacatggtgcagggtgagattggtagagtgcttgggtttgaatgcaccaagttcacccgtgagaataagtacctggcgctggcaggaaatagaggggttgttgatgcaaaccagtga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0299300, RefSeq:Os01g0299300