Os01g0308300

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Revision as of 04:36, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0308300| Description = Disease resistance protein family protein| Version = NM_001185366.1 GI:297719866 GeneID:9267165| Length = 3532 bp| ...")
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Gene Name

Os01g0308300

Description

Disease resistance protein family protein

Version

NM_001185366.1 GI:297719866 GeneID:9267165

Length

3532 bp

Definition

Oryza sativa Japonica Group Os01g0308300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:11669222..11672753

Sequence Coding Region

11669310..11672552

Expression

GEO Profiles:Os01g0308300

Genome Context

<gbrowseImage1> name=NC_008394:11669222..11672753 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:11669222..11672753 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcctcgatcctgtccactcttgctggctttttggccaaagtatatacttcagtccaagtaccatcttgctcttcttgtgatcctaaaaaattaccagctactgcatctgaattcgatgagatgaaggtcatactttgtagaattcgagctgtgctagctgatgcggatcggagggagatagaagatctgcatgtgaatatgtggctatatgagctcaggcaagtcgcatacgatttggaggatatcatcgatgagttgtcctacaagacagtccagcctgaagcagagacgaacacccatgaacatgctgatctcaaaaggaagtttgaggtacttgatactgtaaattctccagtgcatgatcatgaagaatccctagatacagatatgcttgacaaaatcagcaaggtcagaaatagacttaaatccattaacagttttcgtgaaagcctctcgctgcgagagggtgatgggagaatcagagtaagcaccaccagcaatatgcgtgcttcgagttctctagctagtgagacagggacctttggaagagatggagagaaaaataagttacttgacagccttctgaataatgacaatggtactgacaacaacttacaggtgttctccatagtggcaatgggaggcatggggaaaactacactagcaaagctcatctacaacgatgaacaggtgaaagaccactttcagataagagcttgggcttgggtatcagaagtttatgatgtgacaaggacaacgaaagccattattgaatctattaccagagaagcttgtggtctgactgagctggaagcgcttcagaataagctacagcatattgtttcaggaaagagatttttgatcgtccttgatgatatatggattataaatttgctccagtgggatgaattgcggcagcctctagaccatggaggtagaggaagctgtattgtgacaaccacaaggaatcaaaacgttgcacagatcatgagcaggttgccacaagttaatttggatggcctgaatcttgcagcaagttgggcattgttctgccactgcattaggcaaggatgccattctctcaagctctctggaactcttgagaccattggtagaggtatagttgagaaatgcagcggtgttcctctgacgataagggtgattggaggcctactttcttctgaaaccaacgaggaaacatggaatgaaatccttacctccgatatttggaacttgaccgaggggaagaactgggttcttgatgtattgaaggtgagctatgttcacttaccagctgagataaaaccatgttttctctattgtgcactgtttcccagaggacacatgtttgataaggaaaatattgtgaggatgtgggttgcccatggatatctacaggcaacacactcagatcggatggaatcattaggccataaatacatctctgaactagttgcaagatcattctttcagcaacagcatgctggaggtcttggctactatttcacaatgcatgaccttatccatgacctggcaaagtcacttgtaataagggatcaaaatcaagaacaggagctccaggatctaccaagcatcatcagtccaagggttgacatcatcggaagcaaatatgaccggcacttttcagccttcctctgggccaaagcactggagactcctttaatagtacggtcaagcagaggacgaaatcaagaatcattgcgatcactgttgttatgcttagagggtagaaatgatgatttcttacaggtaaacttcactggtaattctatcatgttgcactttgaaagggatttcttcacaaaacctcatatgcgctttctacgagtgctggaacttggcagctgcaggctatctgaactgccccactctgttggtaacttgaagcaactaagataccttggtctttcttgcacagatgttgtaagattacctcaggcggtatgtagcctccacaatctgcaaacacttgacctgagatgctgcaggttcctagttgagcttcccaaagatataggacaattacaaaatttgcggcatcttgattataatgtcttaggaagaaatgattctacaataccagtctgcaagttcaaaagtttacctgagggcataggaaagttgactaaactgcaaacactccctgttttcattgtgcacttcactccaatgacagcaggagtggcagaactcaaagacctgaacaatctgcatgggccactgagcatttcgccccttgagcatattaattgggagcgcacttgtgaagcaagagttgcggacctgataaaaaaagtgcatgttacacgattgtgtttgcggtggaacagccacatacgctatggggataactctaaaccacaagagaaatccttggaagaatttgacagggaagtacttgacagccttgaacctcataataaaatccaatggattgaaattgagaagtacatgggctgcagttatcccaagtgggttggacatccctcctttaaccgactagagacagtaatcatcagtgatttttcgtctgattctcttccaccattaggacaacttccacaccttaggcatcttgaggtcagggagatgagacatgtaagaactgtaggaagtgaattctatggtgatggggcagcactacaacgattcccagctcttcagacattgctgtttgatgagatggtagcgtggaatgagtggcagcgtgctaaaggccaacaggatttcccttgcctccaggagcttgccatctccaattgtcttagcttgaactctctatcactgtacaatatggtagctttgaagaggcttaccgtcaagggttgtcaagatcttgaggcaataaaaggcctagaagaatgttgggtgtcaataaatcatagtcaaatcaactgtacagatacttcaggatatagtgaaattgtggatggaaatgggtcagaatgccccaactcaactctaccagcgagacttgaggtcatacagatttacgattgcatgtcactcccaaattcaagccttcaacaagcaatagggattacgagggttttccgacaaaggtataaactgaatgcttgtcagttctctcaagttctatatgccttatttgattgtaacatgacccgcattcatattcgttctattaggtcaaactcagacatggtttaccctgatcagaaggaagttgatgagagcattgttctgatcatatag</cdnaseq>

Protein Sequence

<aaseq>MASSILSTLAGFLAKVYTSVQVPSCSSCDPKKLPATASEFDEMK VILCRIRAVLADADRREIEDLHVNMWLYELRQVAYDLEDIIDELSYKTVQPEAETNTH EHADLKRKFEVLDTVNSPVHDHEESLDTDMLDKISKVRNRLKSINSFRESLSLREGDG RIRVSTTSNMRASSSLASETGTFGRDGEKNKLLDSLLNNDNGTDNNLQVFSIVAMGGM GKTTLAKLIYNDEQVKDHFQIRAWAWVSEVYDVTRTTKAIIESITREACGLTELEALQ NKLQHIVSGKRFLIVLDDIWIINLLQWDELRQPLDHGGRGSCIVTTTRNQNVAQIMSR LPQVNLDGLNLAASWALFCHCIRQGCHSLKLSGTLETIGRGIVEKCSGVPLTIRVIGG LLSSETNEETWNEILTSDIWNLTEGKNWVLDVLKVSYVHLPAEIKPCFLYCALFPRGH MFDKENIVRMWVAHGYLQATHSDRMESLGHKYISELVARSFFQQQHAGGLGYYFTMHD LIHDLAKSLVIRDQNQEQELQDLPSIISPRVDIIGSKYDRHFSAFLWAKALETPLIVR SSRGRNQESLRSLLLCLEGRNDDFLQVNFTGNSIMLHFERDFFTKPHMRFLRVLELGS CRLSELPHSVGNLKQLRYLGLSCTDVVRLPQAVCSLHNLQTLDLRCCRFLVELPKDIG QLQNLRHLDYNVLGRNDSTIPVCKFKSLPEGIGKLTKLQTLPVFIVHFTPMTAGVAEL KDLNNLHGPLSISPLEHINWERTCEARVADLIKKVHVTRLCLRWNSHIRYGDNSKPQE KSLEEFDREVLDSLEPHNKIQWIEIEKYMGCSYPKWVGHPSFNRLETVIISDFSSDSL PPLGQLPHLRHLEVREMRHVRTVGSEFYGDGAALQRFPALQTLLFDEMVAWNEWQRAK GQQDFPCLQELAISNCLSLNSLSLYNMVALKRLTVKGCQDLEAIKGLEECWVSINHSQ INCTDTSGYSEIVDGNGSECPNSTLPARLEVIQIYDCMSLPNSSLQQAIGITRVFRQR YKLNACQFSQVLYALFDCNMTRIHIRSIRSNSDMVYPDQKEVDESIVLII</aaseq>

Gene Sequence

<dnaseqindica>89..3331#tcatcactcatcagccaaccaaaccaccgattccagaacacaaaatatttgtacatattttggctcaccggagcatccttcatcggccatggcgtcctcgatcctgtccactcttgctggctttttggccaaagtatatacttcagtccaagtaccatcttgctcttcttgtgatcctaaaaaattaccagctactgcatctgaattcgatgagatgaaggtcatactttgtagaattcgagctgtgctagctgatgcggatcggagggagatagaagatctgcatgtgaatatgtggctatatgagctcaggcaagtcgcatacgatttggaggatatcatcgatgagttgtcctacaagacagtccagcctgaagcagagacgaacacccatgaacatgctgatctcaaaaggaagtttgaggtacttgatactgtaaattctccagtgcatgatcatgaagaatccctagatacagatatgcttgacaaaatcagcaaggtcagaaatagacttaaatccattaacagttttcgtgaaagcctctcgctgcgagagggtgatgggagaatcagagtaagcaccaccagcaatatgcgtgcttcgagttctctagctagtgagacagggacctttggaagagatggagagaaaaataagttacttgacagccttctgaataatgacaatggtactgacaacaacttacaggtgttctccatagtggcaatgggaggcatggggaaaactacactagcaaagctcatctacaacgatgaacaggtgaaagaccactttcagataagagcttgggcttgggtatcagaagtttatgatgtgacaaggacaacgaaagccattattgaatctattaccagagaagcttgtggtctgactgagctggaagcgcttcagaataagctacagcatattgtttcaggaaagagatttttgatcgtccttgatgatatatggattataaatttgctccagtgggatgaattgcggcagcctctagaccatggaggtagaggaagctgtattgtgacaaccacaaggaatcaaaacgttgcacagatcatgagcaggttgccacaagttaatttggatggcctgaatcttgcagcaagttgggcattgttctgccactgcattaggcaaggatgccattctctcaagctctctggaactcttgagaccattggtagaggtatagttgagaaatgcagcggtgttcctctgacgataagggtgattggaggcctactttcttctgaaaccaacgaggaaacatggaatgaaatccttacctccgatatttggaacttgaccgaggggaagaactgggttcttgatgtattgaaggtgagctatgttcacttaccagctgagataaaaccatgttttctctattgtgcactgtttcccagaggacacatgtttgataaggaaaatattgtgaggatgtgggttgcccatggatatctacaggcaacacactcagatcggatggaatcattaggccataaatacatctctgaactagttgcaagatcattctttcagcaacagcatgctggaggtcttggctactatttcacaatgcatgaccttatccatgacctggcaaagtcacttgtaataagggatcaaaatcaagaacaggagctccaggatctaccaagcatcatcagtccaagggttgacatcatcggaagcaaatatgaccggcacttttcagccttcctctgggccaaagcactggagactcctttaatagtacggtcaagcagaggacgaaatcaagaatcattgcgatcactgttgttatgcttagagggtagaaatgatgatttcttacaggtaaacttcactggtaattctatcatgttgcactttgaaagggatttcttcacaaaacctcatatgcgctttctacgagtgctggaacttggcagctgcaggctatctgaactgccccactctgttggtaacttgaagcaactaagataccttggtctttcttgcacagatgttgtaagattacctcaggcggtatgtagcctccacaatctgcaaacacttgacctgagatgctgcaggttcctagttgagcttcccaaagatataggacaattacaaaatttgcggcatcttgattataatgtcttaggaagaaatgattctacaataccagtctgcaagttcaaaagtttacctgagggcataggaaagttgactaaactgcaaacactccctgttttcattgtgcacttcactccaatgacagcaggagtggcagaactcaaagacctgaacaatctgcatgggccactgagcatttcgccccttgagcatattaattgggagcgcacttgtgaagcaagagttgcggacctgataaaaaaagtgcatgttacacgattgtgtttgcggtggaacagccacatacgctatggggataactctaaaccacaagagaaatccttggaagaatttgacagggaagtacttgacagccttgaacctcataataaaatccaatggattgaaattgagaagtacatgggctgcagttatcccaagtgggttggacatccctcctttaaccgactagagacagtaatcatcagtgatttttcgtctgattctcttccaccattaggacaacttccacaccttaggcatcttgaggtcagggagatgagacatgtaagaactgtaggaagtgaattctatggtgatggggcagcactacaacgattcccagctcttcagacattgctgtttgatgagatggtagcgtggaatgagtggcagcgtgctaaaggccaacaggatttcccttgcctccaggagcttgccatctccaattgtcttagcttgaactctctatcactgtacaatatggtagctttgaagaggcttaccgtcaagggttgtcaagatcttgaggcaataaaaggcctagaagaatgttgggtgtcaataaatcatagtcaaatcaactgtacagatacttcaggatatagtgaaattgtggatggaaatgggtcagaatgccccaactcaactctaccagcgagacttgaggtcatacagatttacgattgcatgtcactcccaaattcaagccttcaacaagcaatagggattacgagggttttccgacaaaggtataaactgaatgcttgtcagttctctcaagttctatatgccttatttgattgtaacatgacccgcattcatattcgttctattaggtcaaactcagacatggtttaccctgatcagaaggaagttgatgagagcattgttctgatcatatagtggtccaggccaaaggatattttacctacttaccacataaagaggaagatgaagaaattttcttgattttaatcaacaaatcactcacgtgaaaattaccatgcatgtacatgcttctactatcctcttgacaattaagaatgcccaatatgacattttgaaatttactgtaaagagcaaataataggaagtattgatacc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0308300, RefSeq:Os01g0308300