Os01g0318700

From RiceWiki
Revision as of 04:37, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0318700| Description = Similar to ABC1 protein (Fragment)| Version = NM_001049420.1 GI:115436253 GeneID:4327271| Length = 1843 bp| Definit...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0318700

Description

Similar to ABC1 protein (Fragment)

Version

NM_001049420.1 GI:115436253 GeneID:4327271

Length

1843 bp

Definition

Oryza sativa Japonica Group Os01g0318700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:12251530..12253372

Sequence Coding Region

12251826..12252069,12252457..12252578,12252694..12253083

Expression

GEO Profiles:Os01g0318700

Genome Context

<gbrowseImage1> name=NC_008394:12251530..12253372 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:12251530..12253372 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtttaccttcatgatctcacaatcatatcaaatatgtttagatacttttcttttttgcgaggagctaattaatttttatggacataagaataatggcttatttctcttgatagcctcatttgtttggttctatacaggatttccaattgacaaggtggctatgttagaccaggaaacccgtaactatgttggctgtaaattgcttgagcttacaataaaggagttgtttgtcttccgatttatgcagactgatccaaattggagcaacttccttttcgatgaacctacaaggaagttcaatctgattgactttggcgcagctcgtgattttccaaaacgttttgtggacgactaccttcgtatggtagttgcctgtgcgaacaaggatagagctggtgtcttagaaatgtcccgcagactaggatttctcacaggtgaggaaccggaagtcatgctggatgctcatgtccaagctgccttcattgttggtgtgccattcgcaaaaccaggtggtcacgatttccgtgcaaacaacatcacacatagtgtttccaacctcggagctaccatgttgaagcacaggctgacgccaccacccgacgaagtttacagcctccacagaaagttgtcaggtgcattcctagcctgcatcaagataggggcagttgtaccctgtagggagatgctgttcaaggtttatgagcaatacaatttcagcgatgatcgtccggaagtattgtccagcaccggatag</cdnaseq>

Protein Sequence

<aaseq>MFTFMISQSYQICLDTFLFCEELINFYGHKNNGLFLLIASFVWF YTGFPIDKVAMLDQETRNYVGCKLLELTIKELFVFRFMQTDPNWSNFLFDEPTRKFNL IDFGAARDFPKRFVDDYLRMVVACANKDRAGVLEMSRRLGFLTGEEPEVMLDAHVQAA FIVGVPFAKPGGHDFRANNITHSVSNLGATMLKHRLTPPPDEVYSLHRKLSGAFLACI KIGAVVPCREMLFKVYEQYNFSDDRPEVLSSTG</aaseq>

Gene Sequence

<dnaseqindica>297..540#928..1049#1165..1554#catggagtggcttaatggattttctttataatttttcattatagtgttgtaagttcatcatgccccgtaaaagaagttcatcgtgcatagtgacagttttttgaggcatttcgttttgaaaaaaaatcaacatggatttataaaatgtggacacatggaatgtccaaattgggacaacgatagggcatttcacttttcatatgctccacacttagtccaatggagcgaaagttaaacagtatagcatagcgtagtaaggaactaagaggcgcaataaacatgaactgaattctgatatgtttaccttcatgatctcacaatcatatcaaatatgtttagatacttttcttttttgcgaggagctaattaatttttatggacataagaataatggcttatttctcttgatagcctcatttgtttggttctatacaggatttccaattgacaaggtggctatgttagaccaggaaacccgtaactatgttggctgtaaattgcttgagcttacaataaaggagttgtttgtcttccgatttatgcaggcatgtttcttctatactttctgcaaaattcctaaataatgggttgaactctgcatccatgttaatttatcataatctaatcattttgggtatacatgactactgctacgtaaactgctactttagtgttgggcaatacaaacagatatttattgagccattcaactgtcagttttatatcaatgatcaatattttgtatggctgtcatttaatttttcgaacagtatgtatcaatgtatgtttctgatttgctactcattgtgaacttgtgatgacaaatttccttcgatttaattcaaggcttcaataataaatctggaatttagtaatgcgttatagataccaggaaatttgttagtactctgcagtaacttctctttctgcagactgatccaaattggagcaacttccttttcgatgaacctacaaggaagttcaatctgattgactttggcgcagctcgtgattttccaaaacgttttgtggacgactaccttcgtatggtaagcaatcaaattgtttattattaataatcacctcctttagaaacatttagagttttctgtttaatgttttgaagatggttgtctgagtctgatttgtgatattatcgagcaggtagttgcctgtgcgaacaaggatagagctggtgtcttagaaatgtcccgcagactaggatttctcacaggtgaggaaccggaagtcatgctggatgctcatgtccaagctgccttcattgttggtgtgccattcgcaaaaccaggtggtcacgatttccgtgcaaacaacatcacacatagtgtttccaacctcggagctaccatgttgaagcacaggctgacgccaccacccgacgaagtttacagcctccacagaaagttgtcaggtgcattcctagcctgcatcaagataggggcagttgtaccctgtagggagatgctgttcaaggtttatgagcaatacaatttcagcgatgatcgtccggaagtattgtccagcaccggatagaaatatgaaaggccaaccttttgcccacttcccttttggggaactttaaatagttacaggtcggttgcagctcattttttcgagagccacacaatcggctgctccatttgttgttaggctgaaagaatgctctgacaaattgtattattgatagcttgaaaagtgaggatattctgtttagggatgagctctacaaaaactgtataatgctcttatacttaagatgatgaaagttactctgcatatttttgagcacaagaaaataaatgcatcagaatgatgtttctgt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0318700, RefSeq:Os01g0318700