Os01g0324200

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Revision as of 04:37, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0324200| Description = Conserved hypothetical protein| Version = NM_001185378.1 GI:297719890 GeneID:9271854| Length = 7607 bp| Definition ...")
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Gene Name

Os01g0324200

Description

Conserved hypothetical protein

Version

NM_001185378.1 GI:297719890 GeneID:9271854

Length

7607 bp

Definition

Oryza sativa Japonica Group Os01g0324200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:12536681..12544287

Sequence Coding Region

12536681..12536751,12536876..12537669,12540695..12541087,12541490..12541529,12542120..12542458
,12542711..12542771,12544129..12544287

Expression

GEO Profiles:Os01g0324200

Genome Context

<gbrowseImage1> name=NC_008394:12536681..12544287 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:12536681..12544287 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggctcccgtggagagtactgtgcaagcagcgaggtcatccgtcgttcccaatgaagtatctactgggatcgatcctgatgcagagtttagggtgtgtgttcaattcagtcagtacattgctaagcttgatgatggtagttttgttcatgtaccccgcaaatatgaggaatgggttgtggactatcgtgaatgcacattagagagattggtaaaggactttgcagccaagataaattggggtaggtgccagcaggtggttgtgtgtggatatgacacgggcactggtgaggaaacaaagtttactgacaatatggatctagtgcatgcattttttgttaggaagagtgagaggaggttggttttatttgtggatgtggtggataaacctgttcagcttgttactagctcttctgtttcagagattaatgggacagtcatggatgaggttgttacagctaggcatgctgatgctacagattgtaacagtcaacatgccattgattgggagagtttggagatagctccaattccaacagagcaggttcaacagcatgtcattgattgggatggagtggagataactccaattgcagagacacagatagggtcatcaatgcctgtgatggacgaagatgaaatgtatgcatttgttggtcttagagctgaggatgagagagcagaacaagctagacttgaagctgaaaaacaattggactcggcacctagtccggctgcaggtcatgcccaagggaacttagacaatgaggctgacataggtgttagtgatgtggttccgggtgaatctgaagttttctatgacaggaatgaccctccaatgattacaggaagttcatatctaagtcccagggaccagggatcggctatggcagcaactggggacgatacaaggtcccaggggcctgctagggcagctggggacggtggggtgtccgttctgggcccccaatggcggcgacggcgcacggcagcggaatggtggcgcagcttggcgcagggtgttgggggcggtggcgtcgactgccggcgtcggcgcttggtggcagcgcctggctgcgggggcgtcgagtgccggcggcggcgcttggtggcggcgcccggcggcggggttggcagcgcccggcggcgaacggtggcgacgaggttggcgctcacggccaagccgaacgaagacagagacgagactggagggatctcgatccagagaaaaggatttctcttcctttcatctgacaacaccatcttcatgcgtgagcagtccaggaagccgtcattacgcacctccttgcactcgttggcggcgccggtgagggccgcctccgcatcttatcggccgccgaaaggaaaggaaacggactcgccttgcagcaagaatctttttgctcgtttttgcttcaagaatggcggaatagtggctcttgcggagccaaatctcgacagagccgaggagaggagagcctcacggatggggactagaagtgcacgtgagtcgatctcgacggcaaaggtgagcagcagccggtggctagcggacgcccctctcccgggcgtggcgatgatgggtttcttgacaacggtcagcttggcctccgtgcaagcgagggctcggcgatggcttgggatgcccgagaagaatgcattcccagatttcccctatggtcttccaaacgctcaggttattttcagggcaactcattggctccggttttgggcacaactacaaaggtgtgatgaagatgaagattttctgaaggttgcatgccgaaagttggagaccacggttatgcaactatttgctaattatggttggagatttacaaatagacttcaataa</cdnaseq>

Protein Sequence

<aaseq>MAAPVESTVQAARSSVVPNEVSTGIDPDAEFRVCVQFSQYIAKL DDGSFVHVPRKYEEWVVDYRECTLERLVKDFAAKINWGRCQQVVVCGYDTGTGEETKF TDNMDLVHAFFVRKSERRLVLFVDVVDKPVQLVTSSSVSEINGTVMDEVVTARHADAT DCNSQHAIDWESLEIAPIPTEQVQQHVIDWDGVEITPIAETQIGSSMPVMDEDEMYAF VGLRAEDERAEQARLEAEKQLDSAPSPAAGHAQGNLDNEADIGVSDVVPGESEVFYDR NDPPMITGSSYLSPRDQGSAMAATGDDTRSQGPARAAGDGGVSVLGPQWRRRRTAAEW WRSLAQGVGGGGVDCRRRRLVAAPGCGGVECRRRRLVAAPGGGVGSARRRTVATRLAL TAKPNEDRDETGGISIQRKGFLFLSSDNTIFMREQSRKPSLRTSLHSLAAPVRAASAS YRPPKGKETDSPCSKNLFARFCFKNGGIVALAEPNLDRAEERRASRMGTRSARESIST AKVSSSRWLADAPLPGVAMMGFLTTVSLASVQARARRWLGMPEKNAFPDFPYGLPNAQ VIFRATHWLRFWAQLQRCDEDEDFLKVACRKLETTVMQLFANYGWRFTNRLQ</aaseq>

Gene Sequence

<dnaseqindica>1..71#196..989#4015..4407#4810..4849#5440..5778#6031..6091#7449..7607#atggcggctcccgtggagagtactgtgcaagcagcgaggtcatccgtcgttcccaatgaagtatctactgggtaaggccatagacccatcatcttctatttctgttcaacaggaggatcaataacctaggtgataaccgatttagtattaaaactaatggatctatctctcattttttgtgttcatatacgataggatcgatcctgatgcagagtttagggtgtgtgttcaattcagtcagtacattgctaagcttgatgatggtagttttgttcatgtaccccgcaaatatgaggaatgggttgtggactatcgtgaatgcacattagagagattggtaaaggactttgcagccaagataaattggggtaggtgccagcaggtggttgtgtgtggatatgacacgggcactggtgaggaaacaaagtttactgacaatatggatctagtgcatgcattttttgttaggaagagtgagaggaggttggttttatttgtggatgtggtggataaacctgttcagcttgttactagctcttctgtttcagagattaatgggacagtcatggatgaggttgttacagctaggcatgctgatgctacagattgtaacagtcaacatgccattgattgggagagtttggagatagctccaattccaacagagcaggttcaacagcatgtcattgattgggatggagtggagataactccaattgcagagacacagatagggtcatcaatgcctgtgatggacgaagatgaaatgtatgcatttgttggtcttagagctgaggatgagagagcagaacaagctagacttgaagctgaaaaacaattggactcggcacctagtccggctgcaggtcatgcccaagggaacttagacaatgaggctgacataggtgttagtgatgtggttccgggtgaatctgaagttttctatgacaggaatgaccctccaatgattacaggaagttcatatctaagtatggttgagtttagatcagctgtgcggcaacacgctataaagggtcagtttgagcttgggacagagtcgagtgataaagaaaggttcagaggcttttgcaaggctgagggatgtccatgggctattgtagcaaggttgatgccggatgaaaaatctgttagggtactaacaactaacttagatttgtatcggcctttaaattcttgtttgtttttaataattgtagcatggtactaagtaatccaacttttattgcaggttactttgaataaatttccccatcattgttcataaactggcagagtaaagaccaagatggcaacatataagtgggtggcagagaaggcaattccttttttgaagaaggattcaaatatgggtctgacgaagttgaaagaggagttagagaccacatacaacgtcacaataggataccatacagtgtgccaaggtaggcagaaggctttagaaaagatttttgggtcatgggatgagagcttcacatatttgttcaacttcaaggctgaggttgagctgaaaatgcctggaagtgttgtggagatagatgtactggagaatgaagatggggtttattttcatcagtttttctgtgcattcaaaccttgcattgatggtttcataaatggatgtcgaccatatttgagcatagactcaatagcacttaatggagcttggaatggtcatttagcttctgctacatccatagatgggcacaactggatgtttccggttgcatttggattctttcaaagtgagaccactgataattggacttggtttatgcagcagcttcataaggcaataggggatcaatcacccctagcaattagctcagatgcttgtaaggggctagagaatgccgtgaaatatgttttctctgcagctgagcatagggaatgattttggcacttgatgcagaatttcataaagaaatttcatggtccagtctttggaaacatgtaccatgcagctaggtctttcatgccagataggtatgactattacatgaataaaattcatgaggcaaattcagatgtgaagccatacttggaaatatatcataaactgctttggatgaggagcaaattctcagaaggcataaaatgtgacttcgtcaccaataacctagcagagtcgtggaacaaatggattaaggaaaagaaagatcttccaattgtagagcttgcagatggcatcagatcgaagacaatggatctattggccagtaggaggaggataggtaataaattggatggtgtgatgctccctgttgtaattcagcaactgaatacgatgactagaactttgggccacttgagggtagttcaaggtaatagagaccaggcaaaggtgactgagatcactcctgaacatgacattattaggcatgcagtcaatctcacagaacatacatgcacctttagagagtggcaagtttctgggaaaccatgcccacatgcattagctctcattatatcacatagaaatcctagaatggctgattatttggatcccttctattcagtggaaaagtttaagcttgcatatgcagacgttattcaaccatttctagataagtctcaatggcccaaggttaatattggtttcaagttgttgccacctttgactaaaaaaggagtagggaggcaaaggaagaatagaatagttgtgtgccttgagaaaggacaaagcaagcctaggaccaaaggcaagtggcaggttcagtgtaagaggtgtcttgccatgggacataggccatcatcctcaaaatgtcctttaaatggtaccaagaaaaaaaggtaaaaccatacatttacttatttttgcatattgtatatctatttacttgttttacattttcaggaagagtcgtgcgaaacaaggaaggccagtaggctcaactagtggtgcagcaggccctagcacaccaaaacgacaaaaagtcgtaagaagtgattccacttgcactagtcctggtcctatcactagaaggtacatatttttttctatttcaatggtatttttaatcatgtatttaattttactaacactcattttcttctaggcaaatggcattgatcaatgctggtgaacaaggatcaagtcaaatggcaacccctctaaggcctccaagagctgcaaagaagatcactccaaagaaagggaaaaaataagtgattctaagtagtattttcatttgtggacgattttctagtggcaaacataggctttattttgcaatatgaacctgtgtgacttggttatgtaacctcttatatttggttatgtaatctggatggaattctcaaatttggttatttagacttgtttggcttcttgtacgaacaacgtattatggctacatgctgccaaaatttaagtgacattttttagtatgtgctgtgaatttgacatttttgagtatgtgctgtgaaaatttgacatttttgagatgtgctgtaaaaatttgacatttttgggtacatgctgtcaaaatttgatatttttgggtatatgctgtcaaaatttgacatttttgggtatatgctgccaagtgacatctctcccattgtctgcttgaaaataacaagtttacattgcaacgttgcacaaatctgtaggcatttctcacatgagcatatggtctcacaaagctgtaggcatatgctgaggtagttaactgacaggtattttatatcatcacaaaatgaacatatgatcaactatccatcttcctttcttcagattacataacccaaacaggaacaagtgcaaactgaagctgtctgtattgtgctgctgaaagcctgaaactgaaccaatttccagctgccacctagtatatcttctatcacatcacatggaaaattgttgccaatttcagatatgtacactcccataaacaaccaaatatgtctatgtatatagtatacacaatacattaactaatacatccaaatatgaactagtactgccctagctctgtgtcctgtaaatacaaggtcccagggaccagggatcggctatggcagcaactggggacgatacaaggtcccaggggcctgctagggcagctggggacggtggggtgtccgttctgggcccccaatggcggcgacggcgcacggcagcggaatggtggcgcagcttggcgcagggtgttgggggcggtggcgtcgactgccggcgtcggcgcttggtggcagcgcctggctgcgggggcgtcgagtgccggcggcggcgcttggtggcggcgcccggcggcggggttggcagcgcccggcggcgaacggtggcgacgaggttggcgctcacggccaagccgaacgaagacagagacgagactggagggatctcgatccagagaaaaggatttctcttcctttcatctgacagtgggcccaggggcaaaacagtccacaaagtttgagaaaaaatacaaatgggattaagaaatgagaaataaatgaaaaactgagaaagtggtaccaagtagagcaattagcattcctaataacatattatagagggcacgcgaattgggtggtaaaaaagttaaggcacgcgaattgaatggtaaatagtctaaattctctgtgcatgcgtgtgttaatggtggagaggagctacttttcttactcctgagtccatattcggcaagatgatatttattttgggctacctaggtgctacataacggttagcacttgggtgtggctggtgctagtggtggtgctggctttatccgaatgaatttgcggtgagtgactactctatacattagcgccacgttgcagacaccatcttcatgcgtgagcagtccaggaagccgtcattgttggtgttacgggagggataactaaagttggaagagaaggtcgggaaggattaaagagtagtttgttctagcatgtagtagccatggattgatagtgtcattttacgaaaaaaattgttttggtatttaagtgtaacctacttttatcgatggcatagtttcatttttttttccaagtggaacatgtggcgtcgatatgagaaaattaagaatatgccactttctagtttagcttcaatgtaacgccatctacgatatagttgataaaaatgtcgcttattatattttcagcctgataatatgctattttggggtttagatcattttttttctctctattttctccttcacacaatttccacgcaaaaggacctaattggccttgccccttcaggtcgtccaaagcaggccagctagccgcgagaattttcagtatttaccatccaattcgcatgtattttaggatttatcatccaattcgcaacacttttagaatttgccactgggagtatgaaattctttattccttgccactcccgtcagcccgtccctttcatccctaatgccgtgttggttcgtcttcttccagacgcacctccttgcactcgttggcggcgccggtgagggccgcctccgcatcttatcggccgccgaaaggaaaggaaacggactcgccttgcagcaagaatctttttgctcgtttttgcttcaagaatggcggaatagtggctcttgcggagccaaatctcgacagagccgaggagaggagagcctcacggatggggactagaagtgcacgtgagtcgatctcgacggcaaaggtgagcagcagccggtggctagcggacgcccctctcccgggcgtggcgatgatgggtttcttgacaacggtcagcttggcctccgtgcaagcgagggctcggcgatggtaacagtgatggaaggagactacgcacatcggatgggagtggcacggaatgaagaattttgcactcccggtggtaaaatctgaaagtgttgcgaattggatggcaaatcctaaaataagtgtgaactggatggcaaatactgaaaattttcgctagccgccgttgctagtgagaagcatacaaaggctatcaccatttcaacgctgctgaattatactcactttggtgggaccgtccgatttcttcctcaggcttgggatgcccgagaagaatgcattcccagatttcccctatggtcttccaaacgctcaggtaatcttggcccacggaattttcccctaaggaccaggatcccatgaaaaactagatgaataccccgccgtgttgctgtggaaaattaagttgcataatatgtacaaataagatgtaatatgattatcaaaactaaaacaaattgatagtacaatttgagcctaaaaataattgagattgcatgggtttatgagagaataaagaagagacaatttgaaccatagatctatcatccaaaggctagaaataattagggtggtgtggcttaataagagaagagagaaatagtattaactacacttagtcgggatgaactatataagtatattattatagatcgcggttttttttggcaaggggatgaccataagaaaaaatacaggctcactaggtgggatgttgtttgtcaacccaaggaccagggggtcttgggattcataatttggagatacaaaataaatgtcttttaagtaaatggttgtttaagttaattaatgaggatggggtttggcatgatttattgaagaggaaatatctttataataaatctataacccaagttgacaggaaacaaggtgattcccatttttggtctggtcttatgaatgtcaaaagtaatttcttaaatatgggttcttggattgttaataatggggaacaaatcagattttgggaagatagatggattggtaacttggcttttaaggataaatatccatctttgtacgcaattgttcggaggaaaacatcttctattgccactgttatgggatatgttccgcttaatgtttctttcaggagagctttagttggtcagaatcttgtttgttggcatcagttgtgtgcctctatagtatatattcagttgaatgatttgtctgatagttttagatggaatttccatcagaatggcttgttctcggtgaggtctatgtacctagctttaattaataatggctatatcgagaaaaacaagtgtatttggaagcttaagttgccacttaagattaaaattttcatgtggtacctgcttaaaggggttgtgttaactaaggataatttggcaaggcgtaactagaatggcagcttgaggtgttctttttgtttgaataatgagtctattcaacatctctttatggattgtcattttacgaaatttctatggagagcagttcagttctcttttggttttaatcttccagttagcatatctcatatttttaatgggtggcttttaggagttgataagaaaatgagtaaactgatacttgttggagcttctgccatttgttgggcaatatggctgagtagaaacgatatggtttttgacaaatcaccatcattttcctatatgcaggttattttcagggcaactcattggctccggttttgggcacaactacaaaggtgtgatgaagatgaagattttctgaaggttgcatgccgaaagttggagaccacggttatgcaactatttgctaattatggttggagatttacaaatagacttcaataa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0324200, RefSeq:Os01g0324200