Os01g0327000

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Revision as of 04:37, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0327000| Description = Conserved hypothetical protein| Version = NM_001049441.2 GI:297596667 GeneID:4326968| Length = 5933 bp| Definition ...")
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Gene Name

Os01g0327000

Description

Conserved hypothetical protein

Version

NM_001049441.2 GI:297596667 GeneID:4326968

Length

5933 bp

Definition

Oryza sativa Japonica Group Os01g0327000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:12693992..12699924

Sequence Coding Region

12693992..12694274,12698710..12699704

Expression

GEO Profiles:Os01g0327000

Genome Context

<gbrowseImage1> name=NC_008394:12693992..12699924 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:12693992..12699924 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gtggtctcacactctcaccacagtactagcttgccagttagagcttgcttggcaaaaagatatggccggtcagcgtgtggtggccgcggtggccgtcgctctgggcgtgtgcctgctgcagctgccggcggcgagccgcggccagctgcaggtggggttctacaacaccagctgccccaatgccgagacgctggtccggcaggccgtcaccaacgccttcgccaacgactccggcatcgccgccggcctcatccgcctccatttccacgactgcttcgtcagaggttgcgacgcgtcggtgctgctgacgtcgcccaacaacacggcggagcgcgacgcggcgccgaacaaccccagcctccgtggcttccaggtgatcgacgccgccaaggccgccgtcgagcagagctgcgcgcgcacggtgtcctgcgccgacatcgtcgcgttcgccgcccgcgacagcgtcaacctcaccggcggcgtctcctaccaggtcccctccggccgccgcgacggcaacgtctccgtcgcccaggacgccatcgacaacctcccccagcccaccttcaccgccgcccagctcgtcgccagcttcgccaacaagtcgctcaccgccgaggagatggtcgtcctctccggcgcccacaccgtcggccgctccttctgctcctccttcctcgcccgcatctggaacaacaccacccccatcgtacgtacatagatcgatcgccggcgacggcgacggcgacctcgcggccattgaccatttcgccattgacgtacggctcacatggcggcggccggtgtgttcgatcgtgtgcaggtggacacggggctgagcccggggtacgcggcgctgctgagggcgctgtgcccgtcgaacgcgtcggcgacggcgacgacggcgatcgacgtgagcacgccggcgacgctggacaacaactactacaagctgctgccgctcaacctggggctcttcttctccgacaaccagctgcgggtgaacgcgacgctgggcgcgtcggtgagcagcttcgcggcgaacgagacgctgtggaaggagaagttcgtcgccgccatggtcaagatggggagcatcgaggtgctcaccggcagccagggcgaggtcaggctcaactgcagcgtcgtcaacaaccggtcatcctcctccgccgccgggatggagacgtcgtaccactactactccggatccaccatgtccgtcgacgaggtcgcgtcgagctgatcgacgacgatgtacaacctgtttggtgttaa</cdnaseq>

Protein Sequence

<aaseq>VVSHSHHSTSLPVRACLAKRYGRSACGGRGGRRSGRVPAAAAGG EPRPAAGGVLQHQLPQCRDAGPAGRHQRLRQRLRHRRRPHPPPFPRLLRQRLRRVGAA DVAQQHGGARRGAEQPQPPWLPGDRRRQGRRRAELRAHGVLRRHRRVRRPRQRQPHRR RLLPGPLRPPRRQRLRRPGRHRQPPPAHLHRRPARRQLRQQVAHRRGDGRPLRRPHRR PLLLLLLPRPHLEQHHPHRTYIDRSPATATATSRPLTISPLTYGSHGGGRCVRSCAGG HGAEPGVRGAAEGAVPVERVGDGDDGDRREHAGDAGQQLLQAAAAQPGALLLRQPAAG ERDAGRVGEQLRGERDAVEGEVRRRHGQDGEHRGAHRQPGRGQAQLQRRQQPVILLRR RDGDVVPLLLRIHHVRRRGRVELIDDDVQPVWC</aaseq>

Gene Sequence

<dnaseqindica>1..283#4719..5713#gtggtctcacactctcaccacagtactagcttgccagttagagcttgcttggcaaaaagatatggccggtcagcgtgtggtggccgcggtggccgtcgctctgggcgtgtgcctgctgcagctgccggcggcgagccgcggccagctgcaggtggggttctacaacaccagctgccccaatgccgagacgctggtccggcaggccgtcaccaacgccttcgccaacgactccggcatcgccgccggcctcatccgcctccatttccacgactgcttcgtcagagtatgtttcctcttctttctcttttcctttccaagtttagttttagtttttattcaaattaactagatcgtcagagaaagcggaagaagaattccgtggtgctatatattttcatctctaatttagagattttttaaatgcagtctactgtaaattatagctagggaaaaactctacaggtgcaataatgcaactaaggttttttttgctgtcaaacatgatagcgaaatcttgaaaagtcataatccgtcatcagctagtgaaccccagcatacacaagagaggcgtaaagtcctctcgaatagcagaaaagatcaaagtaaaaaaagtgaaagctagctagctctcatcaagagtcgagtcaaagaaagcgtccagataaacaggatagctagaaatgacattagatgtcgacacagccaacacacatttgttccgttattcttctacctgctcgcccaccccaatattctccactgcatttttctccttcgacttttcctgtccttcacacgcagatctcgatggcacggaaacaacccttaatatttttaatcctttattcaaacacaacactcaaactgttataaaacaatttaacaacatttatatattactccacaaaatcgtacatctaaactacacatacatcgaagaaaaaaaaaagacaaatccaatgtattgataatacctagcactattcacgcctgaatttatcttgtttttatcccgatgtgtaaattaatattagagttatttttagcggattgataaatgtcactactttacattctcattttttttctaaaatttttcacaatcattcatattgaattcgatttaaaaaggtatgcccgcaggaccttcgagggattagaatcaattgttgacaatggcatctcacgcatgttctgtctggtcgatttcactgtgcaaatggtccagctagctaggatagttaactgaactgtatagtactcagactgtccaaagaataatctaattctagttatgaatctggatatgcaatcaggatttgtctttcttttagatggggatcgatgtacatcgtaggtagggaacaggttattcatagttgaatctgttcagatagtggatccatgcatggcaacctgaaattaatatggttgcttgtactcatgtccatgctcaattgtcggcatctcgtctagattctactactagacagatttctgggagaaatcattatatggaggagatcgatgccagttagagatagtgactggccaactaattcgctggacttttcttagaaaaaaaactaactcatcgtcgtcagacataaacgtgttcaacttgaacctttaattaagccagcaagtcggaaaccgctggataaactacgggatacggctagtttttgtgagcaaaacagattacccacttcgtagaattgcactatgtttttttggttttgctaattcacttgttagagtgcgcaatctgatccaccaaccgtgggccacccaggtcacattgggtctgctccatcacagacccaaccggaaccacaactttaaatcctgagcctacacaaccaaaaagactagtctgatgggtgagaactgtccataccttttaagtcatgctcccccatcatcaattacctatgtgggactaaacctaacaatatgatagatttttgagtttctatctttcactttttcatccacatgatattgcatcaatattcgtgttcttcaaattacactcagttacatagcacttacactcagttatatatacaacacttacacacttaattatgtagcacttgcactaaggcacaatgcaccaaaattagattttacaacatttttccctctagatttacgatttttgatatgcttatgtcttttttggggttatttcaaataaaacgggctatatcattagttaaaaattatataagatttagagccataaatttgcaagattaataggtattgcctttttttaaaacaaaagttccaatatgtttagagcatggccagcatatatccaaaactgagactcctaaatctctttttagtaacctctaaaatttaagacatgaaaacaccttttctccaaagaaatagcgtaccaacatgttagtgatatgccctagaggcaattatagagatgattgtatcacacactatgtttacatatttatccgactttgttccttaaaatagataaactcattattggttaatgaatatgtgattctttcatgagactctttatgttgtgtgttgttatttctaaaggatccctgatcaaatatcatatgtggaacaaatatgtttagataatcagcacatgtattaattgatgatcatgtctcatggatcatggtatagagataccaaattaataatatagacacatgttggtgaaaatgttgttggatagacccaacatgagacactgcaagagccatatgtgttgtatcatcagtgatctcatttagtattggtgttgaattcttagacctaagattatcatggttcctaacatgtgtagtagcttacttagggactgctaaacgctactccgtaattgggtagttataaaagtagttttcgggtatgctatgaaatatgtagtgggatatgaataatcaagatgggatttgcccctcctatggagagatatctctgggcccctcaatgttgtagattatggaagtgcatggccatgccaaaggtgattgaggagtcaatcacaagttatataatctatcgacaggttcgagtgaatgattgagctattagaggatggcacatatctagccttgagcttaatcgatattgtgaggcaaaggggttcatacaagtatacactagaggttcagccgatatgatttttatatatgcccggtgggtcaatacgttctgctaggggccgttgttgacgcgtggaccgaaaaggagttttcgggttacaaccgagtttatatgtacctacagggtcgcacgtttaatgggccggaataaggggattggatagagatccaatatgagcttaatttcggatagggatccaaataggagtcctacgggccttggagacccgagtgatggatcatatatattcgtgaggggtgtgaccggcggaggcattgcatcacgtgagaaaccctagccatcacttccctccccgagcaaaaccctagccgcgcgcgggtgctagcacatctgcgcatggcgttccgtccctgtacgtgtggataccggtagaggcaccgctggtttgcggtgctgatcggcgtgggagtacggcgaggagaacgcacgaggaggagaaggtcgagccggtgcgatcgactacttcctctacatcgacgcgcgctacttcgcgagagttccttcgacttctcagcgtcttcttctgctgcgcagcacgtcgagtggtaacgatctatgatctaatacttgcatggttcctgatttacgcgatagaaaattttaatttatgctatcatagtctacgcgtatcccaacacaacataatcattctctcctccgctgaccactcctaccgggtgtttccgtctactcttgggcagtgcacgtacgacacgatctcctcttgacgccgcgcgcgagtcctcctcgcgcacagatcgggagcaaatgatctctctcctagatgtggggaacaagaaaaccggggttagaaatttgaattattgagcgcataaggaacaattgtttgaatttaatttctcgataaaaatatctaaatttcaggaatgcgatttattttgagattttgttggtgattcgcttttagcgatctgcttgttggcttatcactcctaactaaagtttaaattttaaaattgattttgggttttatttttcttcctagtctattttgcagcctactaggtatttaaattgcaaataaaatagatataaaaatttttctatttttttattccttcatacttttacaacttaggacatgcgcaatgaatattacccaactagttagtaaggtgggtcctatgatctagaggtagtaagcggtaacaattctcacatgcttatatgagtacagtgataaataaagtgggtccacctaaaaaatatccatcccaacccttttttatctagatcctgtaaaaatatttatattttatttggttgttgtcggcaatagcacaaataccgggtagtaactactatctctttccacgatgtttactaggtagtaagcttgcattaaatgtttgttacctggtttttttttgtcacattatgattgctcttatgaaccgcgcgtatctcaaccgattcgattatattcttaccaaggtaaacgaagtctcatatctcaccattttacagtaatcaacagtattttttatttactttcttgccggttttgtgggtgtcagggttgcgacgcgtcggtgctgctgacgtcgcccaacaacacggcggagcgcgacgcggcgccgaacaaccccagcctccgtggcttccaggtgatcgacgccgccaaggccgccgtcgagcagagctgcgcgcgcacggtgtcctgcgccgacatcgtcgcgttcgccgcccgcgacagcgtcaacctcaccggcggcgtctcctaccaggtcccctccggccgccgcgacggcaacgtctccgtcgcccaggacgccatcgacaacctcccccagcccaccttcaccgccgcccagctcgtcgccagcttcgccaacaagtcgctcaccgccgaggagatggtcgtcctctccggcgcccacaccgtcggccgctccttctgctcctccttcctcgcccgcatctggaacaacaccacccccatcgtacgtacatagatcgatcgccggcgacggcgacggcgacctcgcggccattgaccatttcgccattgacgtacggctcacatggcggcggccggtgtgttcgatcgtgtgcaggtggacacggggctgagcccggggtacgcggcgctgctgagggcgctgtgcccgtcgaacgcgtcggcgacggcgacgacggcgatcgacgtgagcacgccggcgacgctggacaacaactactacaagctgctgccgctcaacctggggctcttcttctccgacaaccagctgcgggtgaacgcgacgctgggcgcgtcggtgagcagcttcgcggcgaacgagacgctgtggaaggagaagttcgtcgccgccatggtcaagatggggagcatcgaggtgctcaccggcagccagggcgaggtcaggctcaactgcagcgtcgtcaacaaccggtcatcctcctccgccgccgggatggagacgtcgtaccactactactccggatccaccatgtccgtcgacgaggtcgcgtcgagctgatcgacgacgatgtacaacctgtttggtgttaattaggatgtgtgtatcccacgaggtcacgacgatgtagaagccgggaaggtcaaaacattaattctatgatgtatgaaaaaaagcgtgtctatgtaaaattttatatatttgtctgcatacatgcatgcatgcagtatgcgagttatttgcagtacgtgtcatttagtttgtaacgcttgatgcaaccatgttcctttcagcttatcagtccattatctc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0327000, RefSeq:Os01g0327000