Os01g0327100

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Revision as of 04:37, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0327100| Description = Haem peroxidase family protein| Version = NM_001049442.1 GI:115436297 GeneID:4326969| Length = 5748 bp| Definition ...")
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Gene Name

Os01g0327100

Description

Haem peroxidase family protein

Version

NM_001049442.1 GI:115436297 GeneID:4326969

Length

5748 bp

Definition

Oryza sativa Japonica Group Os01g0327100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:12706942..12712689

Sequence Coding Region

12707015..12707239,12711079..12711492,12711914..12712336

Expression

GEO Profiles:Os01g0327100

Genome Context

<gbrowseImage1> name=NC_008394:12706942..12712689 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:12706942..12712689 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagctgcagcaagtggctggccgggctgatgctgctggcggcggcgctggcgtgctcgctgccggcggcgagccgggcgcagctgcaggtggggttctacaacacgagctgccccaccgccgaggcgctggtccggcaggccgtcgtggccgccgtcgccaacaactccggcctcgccgccggcctcatccgcctccatttccacgactgcttcgtcagggggtgtgatgcatcagtgctgatcttctcgccgaacggcacggcggagcgcgacgcggcgccgaacaaccccagcctccggggtttcgaggtgatcgacgccgccaaggccgccgtcgaggcggcgtgcccgcgcaccgtctcctgcgccgacatcctcgccttcgccgcccgcgacagcgtcaacctcaccggcaactccttctaccaggtccccgccggccgccgcgacggcaacgtctccatcgacaccgacgccttcacgctccccgggccaaacctcacggcgacgcagctcgtcgacggcttcaagctcaggaacctgaccgccgaggagatggtcatcctctccggctcccacaccatcggccgctcgcactgcgcctccttcctcttcaagaaccgtgaacgtttggcgaatgggacgattagcccggcgtaccaggcgctgctggaggcgctgtgcccgccgacgacggggcggttcacgccgatcacgacggagatcgacgtgagcacgccggcgacgctggacaacaactactacaagctgctgccgctcaacctgggcctccacttctccgacgaccagctcatccgcaacgccacgctcctccccttcgtcgacgccttcgccgccaacgagacgctgtggaaggagaagttcgtcgccgccatgatcaagatgggcaacatcgacgtgctcaccggcgcccggggggagatccggctcaactgcagcgccgtcaacccgtcctcgtcgtcgtcgtcgtcctccgccgggaggatgatcgagaccgtcttccccggcgccggcggtgaggtcgccgcgagctaa</cdnaseq>

Protein Sequence

<aaseq>MASCSKWLAGLMLLAAALACSLPAASRAQLQVGFYNTSCPTAEA LVRQAVVAAVANNSGLAAGLIRLHFHDCFVRGCDASVLIFSPNGTAERDAAPNNPSLR GFEVIDAAKAAVEAACPRTVSCADILAFAARDSVNLTGNSFYQVPAGRRDGNVSIDTD AFTLPGPNLTATQLVDGFKLRNLTAEEMVILSGSHTIGRSHCASFLFKNRERLANGTI SPAYQALLEALCPPTTGRFTPITTEIDVSTPATLDNNYYKLLPLNLGLHFSDDQLIRN ATLLPFVDAFAANETLWKEKFVAAMIKMGNIDVLTGARGEIRLNCSAVNPSSSSSSSS AGRMIETVFPGAGGEVAAS</aaseq>

Gene Sequence

<dnaseqindica>74..298#4138..4551#4973..5395#gagcaatataatctctctctcacagctgcacaagtggtagctagcttactctaattaaccttggttgtaatccatggcgagctgcagcaagtggctggccgggctgatgctgctggcggcggcgctggcgtgctcgctgccggcggcgagccgggcgcagctgcaggtggggttctacaacacgagctgccccaccgccgaggcgctggtccggcaggccgtcgtggccgccgtcgccaacaactccggcctcgccgccggcctcatccgcctccatttccacgactgcttcgtcagggttcgtctctctccaactcgtacatgtaaaataaagctgcagcttgcttagttaattaacagcaactaaaccttaatttgctttgaactgataattaggacgaaaaggtttacagtaaagaaaactgcagggaattaacttttattagctttgatataaaaaggaacggaaacatacatatatgcatgcttgtttacatccccttttttccaacccatctccctcgttttccacacgcacgctttttaaactgctaaacagtacatattttttaaaaagtttctatacgaaagttgctttaaaaaattaaattaatctatttttgaaaaaaaattagcagatacttaattaatcacgtgctaatggaccgctccgtgtttccgtgtttattacatagcttctattctggtcgatcatctgtacctaaattgatgcatccttggtcgatggagttaggtagcagtccatatgtagtattccctctgttttctttgtgtttgttctgagttagatttatttaagttcaactaagttcataagaaaaaaaatacagtaacactgaaaatgctaaattagttttattaaatttattatttaatatatattttaatagtttgcttgtcatgtgttaaaaataatactattacattttttcatgaacttaatttggtcaagcttaaaagaagactgacttagcacggacttataagacggtttataatataaaatgaaaggatgctcattggtcataataaaacagatttgttatatagatgttggaagagaggatttttcctaaaaattaacaagaaagagaaggacaaatctagctactcgcctcgaaggggcggcagccgccagttagggtgtgtttggttgggtggatgagttctggatgggagatggcagcccgattttttgtggtgtttgattggagagaagggtggatggggcagcctgaaatagggaatattccctcaatgtgctggatgagtgcgatttggctggatgaagccattcaattttggtatgggtgacgtgtcctattctgattggttgtggtttgtttgattttctgttaagcaagctccaaatgatttttttctcccaaatcgtttacctaatttatgatttgattacatcattacatttgttacaattatatctttaaaataagatgtcggatgattatattttgataaaaatatatataacaaatgggtcccactaacttttgtcttttctcatacatgctatatccctccaaccaaataagaaattggatcgccatatacatacgaaccaaacaaaaaattggatcaccatatccaacaaaatatagatggtcatatcctatccatgtatgatcctgaaccaaacacacccttatacactgcaccgtagaaaaaaaatccataaatcagttttattaattgcatcaaaaaataattgttacctaatcaatgtgaaccgccggagaatgtacggtgacaattcgtttgaacggtagcaaggatactcgtatgaagatcgatgctttgggaagcccaagtgtgtgttgtacacgatttctggatttcaagatacatagacctttcatggaagcagtatgaatgctgccagttggacagtgatagatcgattatatttctccattttgaaaaagagattgtagattccgaatatccatttttgtatcaaagagtactagctaattgtaccagaattacttgaaaataatgtttgtcctaggtcgatggtgattgctcggccattctagctaatcaaacaggtgaaaatatgtggttgaaatcacatgctagcttaacttgctggaaccttgaaatatttttcatttaaaagttctaagaaataaaaaacaatttcccatatgtagggaggttgatacgtattgtgagacaatcatagaaagtttcgagaccaaagtctactttgcttgtgacatagttagcaaaaacgagatgtttcaagaaaaaacaaatggtaaagaaagaaaaattacggttcttaacataatactttaaggtacttcaattttgtacgaattaaaaatgataccacgaggtactaatactttgaggtaccattttgcaccagaaaacatatgatacctccctatactttttgaagaatgataatattattcacaatggaaaatataaatttctagtttttatctctttttttttgtcgtctgccagtttcatattaaaaaatgaagttaagttccagcttaaaaaaaaaggaatatggagttaagtttcctcttgaaaggttggtaatatatgtgaaatatggtttcgagaacattttagagactggtttaatttcttggctgttccaaactagatagtgattaccgccgtacacagttacaaatttacacatcacagacacataacataggcctaatcaacagctatctaattaatttagcagtgatgttgtacctttagatgctgtgcatatgatatgccgagttcgcaaacatgatatgtcaaggtcttcttcaacttgtatggcatacttcctccatcccatgaaaaccaatatagtactagatgtgatactcttagtattatgaatttggacatatctctgtccagattcattgtattataatatgtcacatccaatcatagatttatttttttagacggagggacgattttgctatatatttgtcgataaatttttccctaaaaatttgacagatgtaattacagtacaatcgtagtgtaattttgggaaaaatttgtcgacaaatgtataggtagtccctatattaatgttttttacctactcatttataagtggtttcacgggtctactcacttgcatctgtgtatagtacaaacaaatggataaccaacccatttatttgtattataagtgatttcacagttgatttaattccacttgcatacttagccgggaccccgggaccctgctacgtgcaaagagcacacgaattgatgtttccccggtttaatggggtagctatagatacatcaatatgtgaacggattaattaattggatggacggctgctgtcgtactttgtttgcttatctatatctagattgaccaacatttgaggatcacgagtacttactacgaacaatcagacatggtatatattcgtttataactttgcatatagagatggggtaataccatgcatacatatatgccattgatcacgttgagaaaggaagaaatatttatcggccttaactcaaagcatgcgtttgccatctttcatctagatctaataattctatcttccaagtccctaattatggatgggagataggggatcttccatttgcaaaagaaaatcttaactactatgctgagatgaaggtgtaacaatatattataatttattactaacttagcactactagggatgatttgagttttccgtacttactattatatctgcgtcgaatatatagactcatgcatatacatgtaacatgttaatcaggagtatttacctatctttttagacaatatgaagggcctgttcactttgatgccaaaaaaaaccttaccaaattttgacaatgccaaaattttggcatagttaccaaaatttgacagcaaactaaatgtagctacttttttagcaactttaccaaaatttggtaagattgaaaatggcatcaaagtgaacatatctgaaagttatatatatatagttattcccatatttatagttactaccttcaaaatcttattttattcatttccaaaaaactcttatttaattattaatttaaaaaaagtttatttatgtcgtcattggttaggggtgtgatgcatcagtgctgatcttctcgccgaacggcacggcggagcgcgacgcggcgccgaacaaccccagcctccggggtttcgaggtgatcgacgccgccaaggccgccgtcgaggcggcgtgcccgcgcaccgtctcctgcgccgacatcctcgccttcgccgcccgcgacagcgtcaacctcaccggcaactccttctaccaggtccccgccggccgccgcgacggcaacgtctccatcgacaccgacgccttcacgctccccgggccaaacctcacggcgacgcagctcgtcgacggcttcaagctcaggaacctgaccgccgaggagatggtcatcctctccggctcccacaccatcggccgctcgcactgcgcctccttcctcttcaagaaccgtgaacgtttggtacgtgagaaaagaaaacttctgcattaaatgattgcccttgtttttcatgacgccaaaacgattattattttttagaagactaataatatagtatataacactttatgagcatacagtttaaatttaatcaatagactaaaagcaagttataactatttaagatgatatgatataccctccgaaaaaaaatcaaaccctctgtgtccagatttatctatagggtttatttcttttaggacggagggagtacgcaagaaaatatatatatatatatatatatatatatatatatatatatagacacacatacatacatacatatacatatatatatatatatatatatatatacacacacatacatacatacatatctctactgatagtatacgtgtggtgatgatttttcccggtgtaggcgaatgggacgattagcccggcgtaccaggcgctgctggaggcgctgtgcccgccgacgacggggcggttcacgccgatcacgacggagatcgacgtgagcacgccggcgacgctggacaacaactactacaagctgctgccgctcaacctgggcctccacttctccgacgaccagctcatccgcaacgccacgctcctccccttcgtcgacgccttcgccgccaacgagacgctgtggaaggagaagttcgtcgccgccatgatcaagatgggcaacatcgacgtgctcaccggcgcccggggggagatccggctcaactgcagcgccgtcaacccgtcctcgtcgtcgtcgtcgtcctccgccgggaggatgatcgagaccgtcttccccggcgccggcggtgaggtcgccgcgagctaagctatacccttgctgaccatgtaatatacgtcatatatatgatgataatgtaaaattaataatgcatgacacgcacttgcactgtgtgttgtacggccagggcaagtgtggttggttgatgaaggctttgtttgcacctacttgatgtgtgtagtgactctgccatgaacgatgcacgtatacaagtatataattaagatggccggcagctggtaataagtagaacacctaccaagttaccaacttaccatgcatgaataaatgttcatgcataaattacggcgctactcataattcaccaaaaacatacgtgtacatagaaaaaatagatcaatggctattcaaaataagta</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0327100, RefSeq:Os01g0327100