Os01g0329400

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Revision as of 04:37, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0329400| Description = Mitochondrial substrate carrier family protein| Version = NM_001049457.1 GI:115436327 GeneID:4326984| Length = 5026 ...")
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Gene Name

Os01g0329400

Description

Mitochondrial substrate carrier family protein

Version

NM_001049457.1 GI:115436327 GeneID:4326984

Length

5026 bp

Definition

Oryza sativa Japonica Group Os01g0329400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:12847415..12852440

Sequence Coding Region

12847917..12847942,12848016..12848175,12849222..12849363,12849460..12849656,12850154..12850535
,12852097..12852179

Expression

GEO Profiles:Os01g0329400

Genome Context

<gbrowseImage1> name=NC_008394:12847415..12852440 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:12847415..12852440 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgctgctgcggcggcggagacgtcggaggcgtccacggccgggctcgcgctcgcggaggccaacatcaactggcagaggttggacaagaccaggttccatgtcattggagctatcctatttactgctcagcaaggtgttctgcaccctacggccgttgtgaagaccagaatgcaggttgcagaaggagggctttcacacatgtctggcttttctgttttcagaaggatattgagaagtgatggcatccctggtgctttcagaggctttggcacctcagcagttggagcactgcctggccgggtctttgctctgacttcattagaggtgtccaaagaaatggcattcaaatactctgaacattttgatatgtcagaggcatcaaggattgctgtagctaatggtatagcaggtctagtgtcaagtatattctcaagcgcatattttgtgccattagatgtgatttgccaaaggctcatggctcaaggactaccagggatggccacatacagaggcccatttgatgtgataagcaaggttgtcaggactgaggggctccggggcctttaccgcggttttggaatcaccatgttgactcaatctccagcctctgccctttggtggagttcatatggtggtgctcaacatgccatatggaggagcttgggttatggaattgattcacaaaagaaaccatctcaatcagaactagttgtcgttcaagcaactgctggaacaatagctggtgcttgctcatcaataatcacgacaccaatcgataccattaagacacgacttcaggtgatggataactatggtaggggcaggccatctgtcatgaaaaccaccagggtgctgctagaggaagatggctggagaggtttctacagggggtttggaccgcggtttctcaacatgtccctgtggggtacatccatgattgtaacttacgagctaataaagaggctctccgtcaagccggagtga</cdnaseq>

Protein Sequence

<aaseq>MAAAAAAETSEASTAGLALAEANINWQRLDKTRFHVIGAILFTA QQGVLHPTAVVKTRMQVAEGGLSHMSGFSVFRRILRSDGIPGAFRGFGTSAVGALPGR VFALTSLEVSKEMAFKYSEHFDMSEASRIAVANGIAGLVSSIFSSAYFVPLDVICQRL MAQGLPGMATYRGPFDVISKVVRTEGLRGLYRGFGITMLTQSPASALWWSSYGGAQHA IWRSLGYGIDSQKKPSQSELVVVQATAGTIAGACSSIITTPIDTIKTRLQVMDNYGRG RPSVMKTTRVLLEEDGWRGFYRGFGPRFLNMSLWGTSMIVTYELIKRLSVKPE</aaseq>

Gene Sequence

<dnaseqindica>4499..4524#4266..4425#3078..3219#2785..2981#1906..2287#262..344#gccatcaaatttccgccgctctcctcctcctctcctcttctccctcctgcgccgccgccacctcctcctccctcttccgcgcgcatattcgcatcgcataaatcgcaccaaccgcgcggcaagaggagagggaggaggaagccgacctagcgggctagcaggcagggcgtcgagcgggttggagggtttcttgagcgggttcgccagctcgagctgtttgcttgtggggttcttgtttttcttttccgggatctttgggtgatggctgctgctgcggcggcggagacgtcggaggcgtccacggccgggctcgcgctcgcggaggccaacatcaactggcagaggtaaagcgcccccttttgatttctttcacttcggaataaaaatgttctttctttctttgttttttttttttgagtcatgcgaggagggatggctgcggcttagcgcgatgataattactccgcctttgcagaacagtagtattagcttcttcatatagtgatcttggccgttcaccatcaaatctgcctgggtttagttcgcgatttgggattggggatgagaaaggggaattttgtggtggtaggaagtcgagtcacttgcacattagccacggttaggtgttttttttttctttaacctttttttgtggacttgtgggagcactcacgaggatcacgccattgtcgctgtcggtttggatggtgaacagaagttaggcgctttgctgtttggttatggcaaggccaacttaggtatggcttccgcaagctttcagttgcacctttctgaatgggaatagtctgtttcacaagttgagatggaattcttactcaataatgcttggtagaatccctcaagctgaaagtgtgcagaggtagaaaagaagacgttttgcttttctgttgataatatatgagcgaggtgttgtttgtatggaggaggagtagaactactacttctccggtcacgataacatgccgtttaggcattatgtggactccgacacacaaatttacgggataatttggacaataccaacgcaaagatatgagagctgcaaaataccattgtatgtgagatgtggggcttggaaaccacatgtcaatgacacacacaaatagtattttgcaactttgcgatttctgtgatggtaccaaacaaattggccctaaatttaattgacgcttaggacaaccaaactacaaagaaaacaagccaaaagatttgtctgaaacgacaaataaaatggaccatagatagtaatttatttgcaactccaatatattacaatattgtgaaagtacttttgagacaaatttacttgtatgatttttatatatttgatctaaatatttaaggagacattggtgctcaaagtattcaaagtttgactcaatgtatgtatttgacacaacatgttttatcatcgactcatgtctgcaactcatatatcaagcatgttttcctaagcacttcagtacctattgctgtagcttttgggatgtgtagctattcattttgttataatgttacaccatgttttgggcgttgcaggggtgggggttggctcaccgattgacatttggcataacatgctgctaactaagcttctaatacataaaccataaccaagattcatgttatgtttcagttctagtgtctcaagtctcaattgaatttcacattgttccgaccattaatataatggacaggagttctggctagtgtgtcaattcctctttatgatgcttataacagtggatgttatatagaaaagattaccacttgcggtgacaatccatgcaagtatctatatcaaatcatatgaagcgccaatttgtatcagcatatttctgtgactgaaagaatttcattttgcttattttgcatcacaattaggttggacaagaccaggttccatgtcattggagctatcctatttactgctcagcaaggtgttctgcaccctacggccgttgtgaagaccagaatgcaggttgcagaaggagggctttcacacatgtctggcttttctgttttcagaaggatattgagaagtgatggcatccctggtgctttcagaggctttggcacctcagcagttggagcactgcctggccgggtctttgctctgacttcattagaggtgtccaaagaaatggcattcaaatactctgaacattttgatatgtcagaggcatcaaggattgctgtagctaatggtatagcaggtctagtgtcaagtatattctcaagcgcatattttgtgccattagatgtggtgagcattcatttccactcttgtgccatgttcataacttctccgtttgcccgtaatactttgatgttcaataatctactgtcactgttaaaggatctgctttacaatgatgattttggttcaccaaacttgtaaacatatcaaccaaaactttgatgaaaacttgccttttggctggtgaattttgtagtgcatgcatatacatgttgcctattgatttaaagcctagtgactcttgagattccttctttgactacttaagttttattcactccactttccttctgaccatttcctgttatcacataattcctttttgtaagctcttaaatctctatttcttcacctgacaagggctaattgctttcataataatctgaatctactatttcatagttgctctcacatctcaacaagttcaaacagtaggattttactaactagttgaggacatctatattattagatagtttacacggcatctttgtgttctgtagatttgccaaaggctcatggctcaaggactaccagggatggccacatacagaggcccatttgatgtgataagcaaggttgtcaggactgaggggctccggggcctttaccgcggttttggaatcaccatgttgactcaatctccagcctctgccctttggtggagttcatatggtggtgctcaacatgccatatggaggtgtgttagtttttatccaaaatttgttgttcattttggttcaaaggtttaaatttgtagttcctttcttattcaatattctcatcatcaacataggagcttgggttatggaattgattcacaaaagaaaccatctcaatcagaactagttgtcgttcaagcaactgctggaacaatagctggtgcttgctcatcaataatcacgacaccaatcgataccattaagacacgacttcaggtaactatatatatttttctgaacacatggctgttttatctttgattatttgtagatatattttttagtgaacatttattttgttacctgtataactgcattgatctttctggtggaactgtgaaacaataatggtagactttatgccacggtcaacatcttcatgatagtactctgggttggaaatcaaactcacctttgcagtgttagagaagtcacaggaattcctctggctgcactttcctcagagcttctagttgacaaacccaaagagacatacttatgctagcagccttactgttagatatgtttaggcggtgaaggacaaattatgctttgcggtccaggataatatgagaagtcattggcctttttgcaacatactgtgtaacaaggttcatgtacttcatcactgatagcaaccattaccacaatgttatagggagaagtacaaaagttctcttcaaataagttataggtcgtttgtttagctctgacatgagtaatacacatatgatctttttatggttctccatgtcacaagtcatttggctgttctgttttccaaccactttcatgtgtattcatattctgaatttcatttcaaggctatcactgcaacatgttctgtttttgtccatcatagtggctgatgtcagtactaatgacatgattctgaggtatgtaggttgtctttcggttgggttgtttatattattgttgtgatatagtctgcctgaaatgttgctagaagtctcacctagcagattttacggcaactttcatcaacatccaaatgccctttcaaagctgggactgaaatttgcttgtagctgactatgtacctgtgacactggctgatattaacattctcaacatgattgtgtgatttgtattaacgtgctgttgttatgacaagatccttctctgaattgtctttgcaatgatgctatctattaccatatcaaagggcatagtagccatacaaattactacaatatacttgccagagttccatctgcttgttctaacatgcgttatttcaggtgatggataactatggtaggggcaggccatctgtcatgaaaaccaccagggtgctgctagaggaagatggctggagaggtttctacagggggtttggaccgcggtttctcaacatgtccctgtggggtacatccatgattgtaacttacgagctaataagtaagcacagttcaaatccattcccccctttggtctgccaggttaattaactcctcccaatttgcacctgcagagaggctctccgtcaagccggagtgatgagccttttggcttctgttccaaatagatggtgtaatcttgaagacccacaatccttatctgtgatgggctgacggctatctagtgagttcttctcaagaaagggatttggaaagtaacaaaatccaatcaagaagttttagtgatggaaactgttttataactacaggggaagtattagcaagttagtagcttaacaagttcctcctatacactgtaaatatttactagggttctgtatgaagttcttctgaaggtgcttcatccaggatgtaatagcctgaggcttgccctggctactgggggcaacatgtacgcggctcataaaaccctaaaaattttggcaatgagcttttgtatctctttccatgaggcaacaaattcccacggtatctcgcttggtttaatttgttatcatttttagcagattctagctagccacggtcttgagatggatgatgtagccaaaccaatttaatggaaaatgtactcgcttaatatg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0329400, RefSeq:Os01g0329400