Os01g0330300

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Revision as of 04:38, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0330300| Description = Peptidase C1A, papain family protein| Version = NM_001049462.1 GI:115436337 GeneID:4326834| Length = 1196 bp| Defin...")
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Gene Name

Os01g0330300

Description

Peptidase C1A, papain family protein

Version

NM_001049462.1 GI:115436337 GeneID:4326834

Length

1196 bp

Definition

Oryza sativa Japonica Group Os01g0330300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:12894626..12895821

Sequence Coding Region

12894626..12895136,12895229..12895821

Expression

GEO Profiles:Os01g0330300

Genome Context

<gbrowseImage1> name=NC_008394:12894626..12895821 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:12894626..12895821 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcttcttccaagcctcacctcgggcttgtcttgtccatcacttgcctcctcttgcaactcctactggtggcggcgaacccgccgccgccgccgccgccgctgcagcggccgtcgtgcgacaagtccgacagggagatgaggttcatgttctcgcagtggatgtccaagtactcgaagcgctactcgtgcccggaggagcaggagaagcggtaccaggtgtggaaggccaacaccgacttcatcggcgccttccgcagccagacggagatctcctccggcgtcggcgccttcgcgccgcagaccgtcaccgactccttcgtcggcatgaacctcttcggcgacctcgcctccggtgagttcgtgcgccagttcaccgggttcaacgccaccgggttcgtggctcccccgcccagcccgagcccgatcccgccgcgctcgtggctgccgtgctgcgtcgactggcgctccagcggcgccgtcaccggcgtcaagctccagggctcctgcgcgtcgtgctgggcgttcgcggcggtggcggccatcgagggcctgcacaggatcaagaccggcgagctggtgtcgctgtcggagcaggtgatggtggactgcgacaccgggagcaacgggtgcggcggcgggcgctccgacacggcgctcggcctggtggcctcccgcggcggcgtcacgtcggaggagaggtacccgtacgcgggcgccaggggcggctgcgacgtgggcaagctgctgtccgaccactcggcgtccgtgtccggcttcgccgccgtgccgcccaacgacgagcggcagctggccctcgccgtggcaaggcagccggtgacggtgtacatcgacgcgagcgccccggagttccagttctacaagggcggcgtgtaccggggcccctgcgaccccgggaggatgaaccacgccgtcaccatcgtcggctactgcgagaacatcggcggcgacaagtactggatcgccaagaactcgtggagcagcgactggggcgagcagggctacgtgtacctggccaaggacgtgtggtggccgcagggcacctgcggcctcgccacctcgcccttctacccgacggcctga</cdnaseq>

Protein Sequence

<aaseq>MASSKPHLGLVLSITCLLLQLLLVAANPPPPPPPLQRPSCDKSD REMRFMFSQWMSKYSKRYSCPEEQEKRYQVWKANTDFIGAFRSQTEISSGVGAFAPQT VTDSFVGMNLFGDLASGEFVRQFTGFNATGFVAPPPSPSPIPPRSWLPCCVDWRSSGA VTGVKLQGSCASCWAFAAVAAIEGLHRIKTGELVSLSEQVMVDCDTGSNGCGGGRSDT ALGLVASRGGVTSEERYPYAGARGGCDVGKLLSDHSASVSGFAAVPPNDERQLALAVA RQPVTVYIDASAPEFQFYKGGVYRGPCDPGRMNHAVTIVGYCENIGGDKYWIAKNSWS SDWGEQGYVYLAKDVWWPQGTCGLATSPFYPTA</aaseq>

Gene Sequence

<dnaseqindica>1..511#604..1196#atggcttcttccaagcctcacctcgggcttgtcttgtccatcacttgcctcctcttgcaactcctactggtggcggcgaacccgccgccgccgccgccgccgctgcagcggccgtcgtgcgacaagtccgacagggagatgaggttcatgttctcgcagtggatgtccaagtactcgaagcgctactcgtgcccggaggagcaggagaagcggtaccaggtgtggaaggccaacaccgacttcatcggcgccttccgcagccagacggagatctcctccggcgtcggcgccttcgcgccgcagaccgtcaccgactccttcgtcggcatgaacctcttcggcgacctcgcctccggtgagttcgtgcgccagttcaccgggttcaacgccaccgggttcgtggctcccccgcccagcccgagcccgatcccgccgcgctcgtggctgccgtgctgcgtcgactggcgctccagcggcgccgtcaccggcgtcaagctccagggctcctgcggtaagctaagctacatcgacatgctaggcgtttctcgttcaattacttgctgatttgattgagttggaaacttggaattaaatcaatggcagcgtcgtgctgggcgttcgcggcggtggcggccatcgagggcctgcacaggatcaagaccggcgagctggtgtcgctgtcggagcaggtgatggtggactgcgacaccgggagcaacgggtgcggcggcgggcgctccgacacggcgctcggcctggtggcctcccgcggcggcgtcacgtcggaggagaggtacccgtacgcgggcgccaggggcggctgcgacgtgggcaagctgctgtccgaccactcggcgtccgtgtccggcttcgccgccgtgccgcccaacgacgagcggcagctggccctcgccgtggcaaggcagccggtgacggtgtacatcgacgcgagcgccccggagttccagttctacaagggcggcgtgtaccggggcccctgcgaccccgggaggatgaaccacgccgtcaccatcgtcggctactgcgagaacatcggcggcgacaagtactggatcgccaagaactcgtggagcagcgactggggcgagcagggctacgtgtacctggccaaggacgtgtggtggccgcagggcacctgcggcctcgccacctcgcccttctacccgacggcctga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0330300, RefSeq:Os01g0330300