Os01g0330500

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Revision as of 04:38, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0330500| Description = Major facilitator superfamily protein| Version = NM_001185382.1 GI:297719898 GeneID:9271394| Length = 3209 bp| Defi...")
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Gene Name

Os01g0330500

Description

Major facilitator superfamily protein

Version

NM_001185382.1 GI:297719898 GeneID:9271394

Length

3209 bp

Definition

Oryza sativa Japonica Group Os01g0330500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:12899594..12902802

Sequence Coding Region

12899594..12900053,12901187..12902802

Expression

GEO Profiles:Os01g0330500

Genome Context

<gbrowseImage1> name=NC_008394:12899594..12902802 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:12899594..12902802 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcgaagtggccaccaccaccctgctgctgacgagccatgaagcaaaaccggccaaggcaccgtctatccacgacgccatcgaggtgtacatcggcgccaccggcgcccgccaacttctcaaggccatgctgctggccttcgcttgggctttcgacgcgcagcaggtgttcatgtccgtgttcacggacgcggagccgccatggcactgcaccggcgtcgtcgatgcggttgaggcggcggcgggcgactccggctcgtcctgctcttcgccggccacttcggcttcgccgtgcgcgctcccgctcggcacgtgggagtgggaccgcctggccaagacgtcggtggtgtcggactgggcgctcaactgcagcggcggcggcccagcgctcgtctccctcccggcgtcgtcgttcttcacaggaaacctcgtcgtcgttcttccatacagtctcatatcggccaccaccaccccgctgctgacgagccatgaagcagagccgtccatcgacgacgtcatcgaggcgtacatcggcgccaccggcgcccgccagcttctcaaggccatgctgctggccttcgcttgggctttcgacgcgcagcaggtgttcatgtccgtgttcacggacgcggagccgccatggcactgcaccggcgtcgtcgacgcggctgcggcggcggcggccgactccggctcgtcctgctcgccgccggccgcttccgcttcgccgtgcgcgctcccgcctggcacgtgggagtgggaccgcccggccgagacgtcggtggtgtcggactgggcactcaactgcggcccggcgctcgtctccctcccggcgtcgtcgttcttcgccggcaacctcgccggcggcttcctactcgcaacgctcgccgacactcacctgggccgcaggaagatgctcctcctgtcactggtgaccatgtccgtcgccgccgcgctcacggcgttctcgccgaacgtgtgggtgtactccgccctgcggttcgtgtccgggttcggcaggtccatggtgggcacgtcagcgatggtcctgtccacggagctcgacgggaagcggtggcgcaacacggtgagcgccgcgggattcgtcttcttctccgtcgggttcgtgtcgctcccggcgctcgcgtacacgttccgcgaggcgtcgtggcggaacatgtacgtgtggacgtcgctcccgtccctctgctacgccgtcctgctctacctgctcgtccaggagtcgccgcggtggctgctggtgcgcggccggaagcaggaggccatcgaggcggtgcgccagatcgcgtcgctcaacggcggcggcggaggcatcacgacgtcgagcttctccatgctggacgcgtgcgccgtggagctcggggacggcggcgagggcatgttcgccacgctgcactcgatatgggagcggcggcgggcgctccggaggctggcggcgatcactgcggcgagcttcggcgtgggcatggtctactacgggatgccgctcaacgtgggcagcctgagcccctccaacctctacctgagcgtggcgtacaacgcggtggccgagctcccgtcgtccatcctcgcgtggctcctcatgggcaggtggttcaaccggcgcggctcggtggtcgcgctcaccacggcgtccgggctgtgcagcctcgccgcgtgcgtccccgccgtcgtcctcccggacggcgcgcggatggccgccgaggtggcctcgttcttcgcgtcgtgcacggcgtacgacatgatgctcatgtacaccatcgagctgttcccgacgtcggtgcgcaactcggcggtggggctggtgcggcaggcggtggcgctgggcggcgtggtggctcccgtgctcgtcgcgctcggccgcgagacgacgagctactggtcgtcgtcgttcggcgtgttcgggctcgccgtcggctgcctcgggctgttagtcacctgcctgccggagacgagggggaggaggttgtcggacaccatggaggaggaggaggccgccgtcttgtccagctctggcgcgagcgacatggataacaacggcgagctcgtgtaa</cdnaseq>

Protein Sequence

<aaseq>MGEVATTTLLLTSHEAKPAKAPSIHDAIEVYIGATGARQLLKAM LLAFAWAFDAQQVFMSVFTDAEPPWHCTGVVDAVEAAAGDSGSSCSSPATSASPCALP LGTWEWDRLAKTSVVSDWALNCSGGGPALVSLPASSFFTGNLVVVLPYSLISATTTPL LTSHEAEPSIDDVIEAYIGATGARQLLKAMLLAFAWAFDAQQVFMSVFTDAEPPWHCT GVVDAAAAAAADSGSSCSPPAASASPCALPPGTWEWDRPAETSVVSDWALNCGPALVS LPASSFFAGNLAGGFLLATLADTHLGRRKMLLLSLVTMSVAAALTAFSPNVWVYSALR FVSGFGRSMVGTSAMVLSTELDGKRWRNTVSAAGFVFFSVGFVSLPALAYTFREASWR NMYVWTSLPSLCYAVLLYLLVQESPRWLLVRGRKQEAIEAVRQIASLNGGGGGITTSS FSMLDACAVELGDGGEGMFATLHSIWERRRALRRLAAITAASFGVGMVYYGMPLNVGS LSPSNLYLSVAYNAVAELPSSILAWLLMGRWFNRRGSVVALTTASGLCSLAACVPAVV LPDGARMAAEVASFFASCTAYDMMLMYTIELFPTSVRNSAVGLVRQAVALGGVVAPVL VALGRETTSYWSSSFGVFGLAVGCLGLLVTCLPETRGRRLSDTMEEEEAAVLSSSGAS DMDNNGELV</aaseq>

Gene Sequence

<dnaseqindica>1..460#1594..3209#atgggcgaagtggccaccaccaccctgctgctgacgagccatgaagcaaaaccggccaaggcaccgtctatccacgacgccatcgaggtgtacatcggcgccaccggcgcccgccaacttctcaaggccatgctgctggccttcgcttgggctttcgacgcgcagcaggtgttcatgtccgtgttcacggacgcggagccgccatggcactgcaccggcgtcgtcgatgcggttgaggcggcggcgggcgactccggctcgtcctgctcttcgccggccacttcggcttcgccgtgcgcgctcccgctcggcacgtgggagtgggaccgcctggccaagacgtcggtggtgtcggactgggcgctcaactgcagcggcggcggcccagcgctcgtctccctcccggcgtcgtcgttcttcacaggaaacctcgtcgtcgttcttccatacagtctcatatgtgcaccaatgtgtgaccgcgggtgtgagtcccgtatgtgctcgtgtgtggggccggtcagtgctgaggagcaccaatgtgctctagtgcttgtgcacactcagcactcaggatggtgtaagcccaaatcccagtggaccgcgggtgtgaggtccgtatgtgcccatatgtgtgtgcacaagccgcgggtgtgagtcccgtatgtgtccgtgtgtggggcctgttagtgctgaggggcaccaatgtgtgaccgggggagattgctgggaatagtcccacattgctaatttagggggagttgaaccaatttaaaagtagagggagtccctcacctcttgagctagcttttaaggtgtagcaagactttctcccggttagaccaacgtcgggggaatctaatgggcgggtgatcgatcaacccgcccctccccctatactcctctctattctttcctttcatcataaaattcaaaaaaaaaacaaagttagtaaaaaaataaaaaaatctaatactctcattcatgtgcatagactttatactgtaaactttacacgcataaactttatgtatagaaatattttatatacaaaatatttgaatccgaatttgaatttgaatcgggcatataaacttttgacttataaacattcgctctataaactttaggtggataaactttagatgtataaaatttaggtgtataaacttactaaaaagaggaaattataaaatatttggattcgaatttgaattcgaatttgaatcgggtatataaacttttgacttataaacattctctttacaaactttaggtggataaattttagatgtgtaaactttaggtgtataaacttattaaaagagaaaaagaaaaaaaaaagaaaaaatacgatcgatcgcccgttggccttctcgaccaacgtctcctggtttcggctcaacagcatctgctcggcctggctccgagacgtctgcaggcatccaaacaagcttgcaagttgcatccggagatgcgagccaggctgatacagccaaccaaacacgcccttaattttccccgatactaccactggcatcgtgagagatcagtagaggtgagcactcaacttcgccaaatcgcccatggccgaagcggccaccaccaccccgctgctgacgagccatgaagcagagccgtccatcgacgacgtcatcgaggcgtacatcggcgccaccggcgcccgccagcttctcaaggccatgctgctggccttcgcttgggctttcgacgcgcagcaggtgttcatgtccgtgttcacggacgcggagccgccatggcactgcaccggcgtcgtcgacgcggctgcggcggcggcggccgactccggctcgtcctgctcgccgccggccgcttccgcttcgccgtgcgcgctcccgcctggcacgtgggagtgggaccgcccggccgagacgtcggtggtgtcggactgggcactcaactgcggcccggcgctcgtctccctcccggcgtcgtcgttcttcgccggcaacctcgccggcggcttcctactcgcaacgctcgccgacactcacctgggccgcaggaagatgctcctcctgtcactggtgaccatgtccgtcgccgccgcgctcacggcgttctcgccgaacgtgtgggtgtactccgccctgcggttcgtgtccgggttcggcaggtccatggtgggcacgtcagcgatggtcctgtccacggagctcgacgggaagcggtggcgcaacacggtgagcgccgcgggattcgtcttcttctccgtcgggttcgtgtcgctcccggcgctcgcgtacacgttccgcgaggcgtcgtggcggaacatgtacgtgtggacgtcgctcccgtccctctgctacgccgtcctgctctacctgctcgtccaggagtcgccgcggtggctgctggtgcgcggccggaagcaggaggccatcgaggcggtgcgccagatcgcgtcgctcaacggcggcggcggaggcatcacgacgtcgagcttctccatgctggacgcgtgcgccgtggagctcggggacggcggcgagggcatgttcgccacgctgcactcgatatgggagcggcggcgggcgctccggaggctggcggcgatcactgcggcgagcttcggcgtgggcatggtctactacgggatgccgctcaacgtgggcagcctgagcccctccaacctctacctgagcgtggcgtacaacgcggtggccgagctcccgtcgtccatcctcgcgtggctcctcatgggcaggtggttcaaccggcgcggctcggtggtcgcgctcaccacggcgtccgggctgtgcagcctcgccgcgtgcgtccccgccgtcgtcctcccggacggcgcgcggatggccgccgaggtggcctcgttcttcgcgtcgtgcacggcgtacgacatgatgctcatgtacaccatcgagctgttcccgacgtcggtgcgcaactcggcggtggggctggtgcggcaggcggtggcgctgggcggcgtggtggctcccgtgctcgtcgcgctcggccgcgagacgacgagctactggtcgtcgtcgttcggcgtgttcgggctcgccgtcggctgcctcgggctgttagtcacctgcctgccggagacgagggggaggaggttgtcggacaccatggaggaggaggaggccgccgtcttgtccagctctggcgcgagcgacatggataacaacggcgagctcgtgtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0330500, RefSeq:Os01g0330500