Os01g0332800

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Revision as of 04:38, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0332800| Description = Similar to Serine carboxypeptidase II-like protein| Version = NM_001049468.1 GI:115436349 GeneID:4326840| Length = 3...")
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Gene Name

Os01g0332800

Description

Similar to Serine carboxypeptidase II-like protein

Version

NM_001049468.1 GI:115436349 GeneID:4326840

Length

3786 bp

Definition

Oryza sativa Japonica Group Os01g0332800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:13058083..13061868

Sequence Coding Region

13058289..13058441,13058561..13058666,13058989..13059084,13059174..13059322,13059409..13059684
,13060009..13060097,13060701..13060793,13060890..13060985,13061117..13061224
,13061483..13061759

Expression

GEO Profiles:Os01g0332800

Genome Context

<gbrowseImage1> name=NC_008394:13058083..13061868 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:13058083..13061868 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctcttgtgcatcaccaaggctcaaatccctgtgccaccatccactcttcatcatcttgcttgctctctcattgctgcagacaatcacagcagaggatgagcaggaggctgatagggttgccttcctccctgggcagccaaggagcccacagatgtctcagttctcaggctacatcactgtgaacagccagaatggcagggcactcttctactggttctttgaggctcaggcactgccttccaagaagcctctcctgctctggcttaatggaggtcctggttgctcatctgtgggctatggagcagcttctgaattgggtcctctcatggtcaatggaaatggaacaggtttggaattcaacaagtttgcatggaataacgaggccaatttgttgttcttggaatctcctgttggagtcggcttctcctacacaaatacctcgtctgacctagagagcatcgatgaccgttttgtcgctgaggacacctacaatttcttggtgaattggttcaagaggtttcctcagtacaaaaaccatgacttctacatctctggagagagctatgcagggcactatgttcctcagcttgctgatgtagtgtatgagcgcaacaagcatgttgaaacaaaccagcatatcaatttgaaaggatttattgttggcaatgcagagactgatgattactatgactacaagggactagttgagttcgcttggagtcactcagtgatctcagatcaactctataagcatgtcaacaatgtttgcgacttcaggttatcaccccgtagcaatgagtgtaaccatgtaatgggatacatatatgatcagtacgatatgatcgatattttcaatgtgtatgcacctaagtgcaacactgatgactcatccctcttttccacctcctacagtacagctgatatgaatgctaagaagaggcttaaaggcacgaggatgtactcagggtatgatccgtgctattcgtcacatatcgaagattacatgaacaagatggatgtgcagaaatcacttcatgcgaatacgagtggattgatcaaggacagaaaatggagtatctgcagttattcaatattcgacaattacgacatcacggtcttctctgttcttcctatttactctaagcttatcaaggctggcctacgaatatgggtctacagtggagacgtggatggcagggttccagttattggatcccggtactgcgtagaagcccttggccttcctgttaagtcacagtggcaaccatggtacctaaacaatcaggttgctgggagatttgttgagtatcaaggattgacaatggccacagtaagaggagctggacatgcagtgccacaagacaagccagaacaggcactggtggtaatcaattcctttctttcaggcaggcgactaccaacaaaaaacaaccgatga</cdnaseq>

Protein Sequence

<aaseq>MASCASPRLKSLCHHPLFIILLALSLLQTITAEDEQEADRVAFL PGQPRSPQMSQFSGYITVNSQNGRALFYWFFEAQALPSKKPLLLWLNGGPGCSSVGYG AASELGPLMVNGNGTGLEFNKFAWNNEANLLFLESPVGVGFSYTNTSSDLESIDDRFV AEDTYNFLVNWFKRFPQYKNHDFYISGESYAGHYVPQLADVVYERNKHVETNQHINLK GFIVGNAETDDYYDYKGLVEFAWSHSVISDQLYKHVNNVCDFRLSPRSNECNHVMGYI YDQYDMIDIFNVYAPKCNTDDSSLFSTSYSTADMNAKKRLKGTRMYSGYDPCYSSHIE DYMNKMDVQKSLHANTSGLIKDRKWSICSYSIFDNYDITVFSVLPIYSKLIKAGLRIW VYSGDVDGRVPVIGSRYCVEALGLPVKSQWQPWYLNNQVAGRFVEYQGLTMATVRGAG HAVPQDKPEQALVVINSFLSGRRLPTKNNR</aaseq>

Gene Sequence

<dnaseqindica>3428..3580#3203..3308#2785..2880#2547..2695#2185..2460#1772..1860#1076..1168#884..979#645..752#110..386#tccaaacactgagctggtagtggacacagagagttctgcactctctttcactgaggagagcagaacagaacaagaggaggagaacaaaaaaaaaaaagagaaaaatcctatggcctcttgtgcatcaccaaggctcaaatccctgtgccaccatccactcttcatcatcttgcttgctctctcattgctgcagacaatcacagcagaggatgagcaggaggctgatagggttgccttcctccctgggcagccaaggagcccacagatgtctcagttctcaggctacatcactgtgaacagccagaatggcagggcactcttctactggttctttgaggctcaggcactgccttccaagaagcctctcctgctctggcttaatggaggttgttgtcatttgtgcattgagcatatgcatttctttgcttgatggattgttcattcatattgatcagtagcaagcaaacaagtattagttgtactttgatttgtctgcagctatatatgtttattcacctgatgtgtgatggtttagttcgtcctttctaagtagtcatagaatatttaccctgtcatttttgtatgtgtgtttctttcactgtttcttgttttgtatcgccattcaactgaatttccatattcaggtcctggttgctcatctgtgggctatggagcagcttctgaattgggtcctctcatggtcaatggaaatggaacaggtttggaattcaacaagtttgcatggaataacggtacgatattattgttcatcttttaccgctcgtatcatgttgcactccgaagtcacgtcatgtgtaaagttgctaccggtcaatgtgggactaacagaattaatctgcaattgttcctctccatgtttcagaggccaatttgttgttcttggaatctcctgttggagtcggcttctcctacacaaatacctcgtctgacctagagagcatcgatgaccgttttgtcggtatttatctagtctcaggatcttcaacttacctcccttaaagtctgaaaaatttgtgttattgtgctcattaactgtatttttcgagcggcgcagctgaggacacctacaatttcttggtgaattggttcaagaggtttcctcagtacaaaaaccatgacttctacatctctggagagagctatgcaggtattgtgcagacagctccctttcttccaacaaaaatatagaaaagttgaataagcccacaagaaaaagaaaaagataccggattttcaccttttgttaattaatgagtagtgtaagcatgcaaaacaggaataaatccaccatctttccactcctcaatattctctagtcaaaaggtttagcctagaatacatgtagtcatccagatcctattccctgaagtcttcagtccacaccaatacatggatcccactataccacctttattaggtcctgaacaagttgatgtttgttattctgttgaaaaatacagctatcttttgttagggttggaatactcattttttgtttgcttctgtcactaaacccaaaacagtcctatcaagggtcaaaggagagagtggcttattcaacaaactatatggtcaaaagtactcagatttaaacattggtggccatctagtggacacacgtatcagggcatatgctgcaaaccacatcatccaatgtgtttcacaacatgcaaacataaccttgaataataagacagttaccaactttttattttgtggggaaagacacttaccaactttgatgcaacagggcactatgttcctcagcttgctgatgtagtgtatgagcgcaacaagcatgttgaaacaaaccagcatatcaatttgaaaggatttattgtaagtaccttatgaaactgatcaaattttcttttggcatcagatttctgctgaaagaatgttatattggaaattagcttgagaccttatatgtgagtgctatttcctcgaacatgtttatgaatgattgtgtatttgtgggctttgctggatctctgtttattgagttgttctagtttgaaacgctgacaagcaattcttttatcttataatactttcatttcctcattcataccattcaatttaagcatattatgcattcagtatgctctcccaaaacaaactgtcaatgatccaatcacaaatgccaacaatattttgcaggttggcaatgcagagactgatgattactatgactacaagggactagttgagttcgcttggagtcactcagtgatctcagatcaactctataagcatgtcaacaatgtttgcgacttcaggttatcaccccgtagcaatgagtgtaaccatgtaatgggatacatatatgatcagtacgatatgatcgatattttcaatgtgtatgcacctaagtgcaacactgatgactcatccctcttttccacctcctacagtacagctgatatgaatgctaaggtaactgtaatgcttaacaactagtatttgtactgtagcaaatatgaaaacagaatgaactgaagataattgaatgcaaatttcagaagaggcttaaaggcacgaggatgtactcagggtatgatccgtgctattcgtcacatatcgaagattacatgaacaagatggatgtgcagaaatcacttcatgcgaatacgagtggattgatcaaggacagaaaatggagtatctgcaggtcatatatgcatgagcttccttgtgaatttctgattgatcagatatactaaatggatagaagaaatgacatcctccatacatttgcagttattcaatattcgacaattacgacatcacggtcttctctgttcttcctatttactctaagcttatcaaggctggcctacgaatatgggtctacaggtttggttcttgcatactagtttgccttaagaatttgatcaagatattatgttatgctacaaactacattatctataagggacaattgcccttatatctcattttttcttcatcatgctttcaaaaaagtttgtttcatttccctgcctttgactgtcatgagttggtttagtgattttttaagtgccactcaagtagactcatacttacattcaggacctgcttttacttatgctcactaaattctgtataatttcgaattcatcaaagtcatcacaaaatttgggaccaacacgagggaattatcaatttgattttacagtggagacgtggatggcagggttccagttattggatcccggtactgcgtagaagcccttggccttcctgttaagtcacagtggcaaccatggtacctaaacaatcaggttgttaccctattacatattccgtgtcatctacgtgtattaatcaaaataaagtgtaaaattatgaattacaatttgtaatattgcacaatttcttcacctatgcaaatccaatgtaggttgctgggagatttgttgagtatcaaggattgacaatggccacagtaagaggagctggacatgcagtgccacaagacaagccagaacaggcactggtggtaatcaattcctttctttcaggcaggcgactaccaacaaaaaacaaccgatgatacaacccagataaaacttacacataaaaataaagaaggaataagtcatcgatattatcatacatagatgaaacaatacatgtattgtaggctcttcatgtatgcaattgtctgtgtcaactagatgccaccctatacattaatctgtatattttccttatgtttgagttttatgttgagaatgataatttcaaccctatattttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0332800, RefSeq:Os01g0332800