Os01g0336300

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Revision as of 04:38, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0336300| Description = Protein of unknown function DUF594 family protein| Version = NM_001185385.1 GI:297719904 GeneID:9268353| Length = 32...")
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Gene Name

Os01g0336300

Description

Protein of unknown function DUF594 family protein

Version

NM_001185385.1 GI:297719904 GeneID:9268353

Length

3227 bp

Definition

Oryza sativa Japonica Group Os01g0336300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:13313562..13316788

Sequence Coding Region

13313562..13314575,13315603..13316452,13316478..13316788

Expression

GEO Profiles:Os01g0336300

Genome Context

<gbrowseImage1> name=NC_008394:13313562..13316788 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:13313562..13316788 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtccactgaaactatcaaagaattcttcaacgtcaatggccagataatcggcgccgccgtgcttgccatgctcgctacggtagtggtggcgctcggcacgtacggccatcattgcagccacccggcgctccgcctcttcgtgtggggcgcctccaccgtcttcctcctgctctccacctccatcatctccaatttgctcaagggggtccagggggacaagtgcagcaatgcctctccccaagcttccggtggcgtccagcagaaggacaagccggatattaggaagatgtggataatcctcctgtgggcaagtccgacacgtcggcgaccgcccgttaacatggcctcgtcgtcgccgtcgtccggcgacgttagcgtcgacgggcagaaggtctggccgccgctggagtatctgctgaagtacatatggctgatttatctgattgtggtgtgctatccactggaggactgggtgggcactaccaggaggaacatcttcgtcgcgttctgcatgctcggcctcgccaagttgctgctcaacctgttcgcgtcatggcgggcgagcagctcgttcgccgttggcaagaacgcccggcttgtctccggctacatggagcagctcgaggaagagggcgacgaggtcggcggccatgaccaggtgccccgttacatagtgacgggggagaaggaggagcacgtcgccacgggcgcccgcggataccgcatcaggcgggacgccctggacgatgagtccagcagcctcgtgacgctggaccgcatgtggcggatggcggagcacggcgatgtcaacggcctcctcgccaagcggcccgagctcagggacctctgcctctccttctccctgttcaagagccttcgccggcggctgtcaggctatcccctggacgacgcgggctctaccaaggcccttgagttcgtgctgcgaggcatgaacgccgccggctctgcctgtgccgtcaacgccgaccgagtgttccatgttctcgtcgacgagctctcgtttgccagcgacttctacttcgctgggcttccgctgtgcacttacagcgggtggtgcgccgccctgaactacatcttctccgtcctaatcgttgtcggagccaccgccgtgggaacaatatataaagtggaaaaggtatgggacatcgtcgccggcgtgtgctccaattggagtaagatggccttgctcggccactacatcaggcacgagccacagtggcgtcggtgtcgccgcgcccacgcggcgctcgacgccatgctgcggttcaggcccgcgaggcggtggcgcaacaagatcgggcagaactcggtgctggagccccgccgcttctgccggcggtccggccttctctccgagaagctctacggccgcgccgggctcatgaggtcggtggaagtctcgccggcggtgaaggacacggtgctcaggtccttgatgagcagctacggcaggtcgagcagaggaagcgttagcgcggcggagcggcgagtcggcggcaaggtcgactggctgtggtatggctcccgaaagagctgggcgtgcgacgacggcgacggctgcgtcagcaccaccgacatcatcctcgcgtggcacgtcgccacgaggctctacgagatgagatgctcgctgcacgcttctccgacgccgtcgccatcatcaccggacatggccgccgcgtgccacctctcctactactgcgcgtacctggcgtcggccgcgccggagctgctgctggacagcgccgcgtggaccgagaagcggtacaaggagttgacggccgacgtcaccgcggctctcgcaaaggacggcgccgccggtgagacgacgacggcgcagcagaggtacgagcggctcgtggcgacactgagcgccggcgcgcgcgacaaggtgctgcgtggcggcgctgagatcgcgcgctgccttgcggaagagtacacgaccgccgaggaggacgacgaggcgtcggcgtggctgttcctggcgaatttctcgtcggagatgatgctgtacatcgcgccgtcggagaacgtcaaggggcacgtggaggccatggcgcgcggcggcgagttcgtcacgctgctctgggcgctgctcctgcacgccggcatcaccgctaggcctgaggcgccaagccgtattatctcgtag</cdnaseq>

Protein Sequence

<aaseq>MASTETIKEFFNVNGQIIGAAVLAMLATVVVALGTYGHHCSHPA LRLFVWGASTVFLLLSTSIISNLLKGVQGDKCSNASPQASGGVQQKDKPDIRKMWIIL LWASPTRRRPPVNMASSSPSSGDVSVDGQKVWPPLEYLLKYIWLIYLIVVCYPLEDWV GTTRRNIFVAFCMLGLAKLLLNLFASWRASSSFAVGKNARLVSGYMEQLEEEGDEVGG HDQVPRYIVTGEKEEHVATGARGYRIRRDALDDESSSLVTLDRMWRMAEHGDVNGLLA KRPELRDLCLSFSLFKSLRRRLSGYPLDDAGSTKALEFVLRGMNAAGSACAVNADRVF HVLVDELSFASDFYFAGLPLCTYSGWCAALNYIFSVLIVVGATAVGTIYKVEKVWDIV AGVCSNWSKMALLGHYIRHEPQWRRCRRAHAALDAMLRFRPARRWRNKIGQNSVLEPR RFCRRSGLLSEKLYGRAGLMRSVEVSPAVKDTVLRSLMSSYGRSSRGSVSAAERRVGG KVDWLWYGSRKSWACDDGDGCVSTTDIILAWHVATRLYEMRCSLHASPTPSPSSPDMA AACHLSYYCAYLASAAPELLLDSAAWTEKRYKELTADVTAALAKDGAAGETTTAQQRY ERLVATLSAGARDKVLRGGAEIARCLAEEYTTAEEDDEASAWLFLANFSSEMMLYIAP SENVKGHVEAMARGGEFVTLLWALLLHAGITARPEAPSRIIS</aaseq>

Gene Sequence

<dnaseqindica>2214..3227#337..1186#1..311#atggcgtccactgaaactatcaaagaattcttcaacgtcaatggccagataatcggcgccgccgtgcttgccatgctcgctacggtagtggtggcgctcggcacgtacggccatcattgcagccacccggcgctccgcctcttcgtgtggggcgcctccaccgtcttcctcctgctctccacctccatcatctccaatttgctcaagggggtccagggggacaagtgcagcaatgcctctccccaagcttccggtggcgtccagcagaaggacaagccggatattaggaagatgtggataatcctcctgtggtcggcaatcatcctcatcatcaagggcaagtccgacacgtcggcgaccgcccgttaacatggcctcgtcgtcgccgtcgtccggcgacgttagcgtcgacgggcagaaggtctggccgccgctggagtatctgctgaagtacatatggctgatttatctgattgtggtgtgctatccactggaggactgggtgggcactaccaggaggaacatcttcgtcgcgttctgcatgctcggcctcgccaagttgctgctcaacctgttcgcgtcatggcgggcgagcagctcgttcgccgttggcaagaacgcccggcttgtctccggctacatggagcagctcgaggaagagggcgacgaggtcggcggccatgaccaggtgccccgttacatagtgacgggggagaaggaggagcacgtcgccacgggcgcccgcggataccgcatcaggcgggacgccctggacgatgagtccagcagcctcgtgacgctggaccgcatgtggcggatggcggagcacggcgatgtcaacggcctcctcgccaagcggcccgagctcagggacctctgcctctccttctccctgttcaagagccttcgccggcggctgtcaggctatcccctggacgacgcgggctctaccaaggcccttgagttcgtgctgcgaggcatgaacgccgccggctctgcctgtgccgtcaacgccgaccgagtgttccatgttctcgtcgacgagctctcgtttgccagcgacttctacttcgctgggcttccgctgtgcacttacagcgggtggtgcgccgccctgaactacatcttctccgtcctaatcgttgtcggagccaccgccgtgggaacaatatataaagtggaaaaggtgatcatattctaacaagtgctaaagagagacacctttctttcaaaaaaaaaaaagctactagtacacttaatatctatatattttttttcttcttagagaagtttctcttaaattactcatccgattacaccgttgtgttcgtaacaattaaatctttacaataagatctcacatgattatattttgatgaaaaatcacaaattacttttatgatatgtctaaattacttctagatttcactaagttacttcttacacatataaaagtaaattcagtaaaccttaaaagtaatttacatatattatagaagtaacttataacaaaaagaaagtaactttaatttagaactatatctagattcatttacatctatataaataagggcaatgctaaagtgacttatattatgaaacggagggagtaactatctgtagtagaaataattatattgtgagtgagctgaaataagaaactacgtagagtacaatttgcaagtaaagtgtagagaagatttataaagtccacaaaatatagaattaactaaaaataataataaaaataatcaacttagagcattatgaatgtataaaagtaatttagtcaaatctaaaagtaatatatatatatatatatatatatatatatatatatatatatatatatatatgataaaagtaacttacgtatataattaaagtaatttataaatataaatattttttcatcgtaatataatcatataagatcttgttgtaaatatttaattgcaacgaatgtaatggtgtaatcagattgtagattgaataagtaatttgagagaaaactttataagaagaaagaaaaagacatgcatatctaagagggaaaaaagcatgcacgtgtagtagtagttcttctcataattggttggtcgctagttaacactaaatcaagaggcttctcggtttagattttgccattcaaagaagggaagcctaactttgtcgtcacgttcgccctcctggtggcggtggcgctcgtcgaggtatgggacatcgtcgccggcgtgtgctccaattggagtaagatggccttgctcggccactacatcaggcacgagccacagtggcgtcggtgtcgccgcgcccacgcggcgctcgacgccatgctgcggttcaggcccgcgaggcggtggcgcaacaagatcgggcagaactcggtgctggagccccgccgcttctgccggcggtccggccttctctccgagaagctctacggccgcgccgggctcatgaggtcggtggaagtctcgccggcggtgaaggacacggtgctcaggtccttgatgagcagctacggcaggtcgagcagaggaagcgttagcgcggcggagcggcgagtcggcggcaaggtcgactggctgtggtatggctcccgaaagagctgggcgtgcgacgacggcgacggctgcgtcagcaccaccgacatcatcctcgcgtggcacgtcgccacgaggctctacgagatgagatgctcgctgcacgcttctccgacgccgtcgccatcatcaccggacatggccgccgcgtgccacctctcctactactgcgcgtacctggcgtcggccgcgccggagctgctgctggacagcgccgcgtggaccgagaagcggtacaaggagttgacggccgacgtcaccgcggctctcgcaaaggacggcgccgccggtgagacgacgacggcgcagcagaggtacgagcggctcgtggcgacactgagcgccggcgcgcgcgacaaggtgctgcgtggcggcgctgagatcgcgcgctgccttgcggaagagtacacgaccgccgaggaggacgacgaggcgtcggcgtggctgttcctggcgaatttctcgtcggagatgatgctgtacatcgcgccgtcggagaacgtcaaggggcacgtggaggccatggcgcgcggcggcgagttcgtcacgctgctctgggcgctgctcctgcacgccggcatcaccgctaggcctgaggcgccaagccgtattatctcgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0336300, RefSeq:Os01g0336300