Os01g0347100

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Revision as of 04:38, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0347100| Description = Protein of unknown function DUF1399 family protein| Version = NM_001049502.1 GI:115436417 GeneID:4326497| Length = 4...")
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Gene Name

Os01g0347100

Description

Protein of unknown function DUF1399 family protein

Version

NM_001049502.1 GI:115436417 GeneID:4326497

Length

4810 bp

Definition

Oryza sativa Japonica Group Os01g0347100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:13942614..13947423

Sequence Coding Region

13943876..13943903,13944421..13944929,13945811..13946092,13946177..13946572,13947012..13947284

Expression

GEO Profiles:Os01g0347100

Genome Context

<gbrowseImage1> name=NC_008394:13942614..13947423 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:13942614..13947423 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccggccccggcgggcgggagcgggaggcggcggggcccgcgttctccttctccgtcgacctcgtggcggccgcgcgccggctgctcgcgctcctccgctccggggacggggagcggggtggagctggggtggtggggccgcggtccgtgcggaggtacgaggagctgtggatgccgctcgtggcggcggagggggcgggaggggaggcgccgatgctggtgccgccgcccgacgtgcggctcgtctggctctgccactgcttccaccatgagagctatgctgcttactgtgcatcaaggtttggacgcctcatcaaccgtccgtcgatccttgatgctgataatgaagaatatgccgctgaccactgtcgggatgtctgggctgcacactatccatcggagccatttgatcttgaagataatgaaactgaaggaaacagtagtaatgacaaatctgctagtgaaattatcgaaatggttcaaagatatactggcctagcagcccgctttgcctcacccttcatctcagaaggtgtctatcatgttgctgctaggcggagatacatgcgtttccttgaacttatcaagaaaattgtgagtacaacccaaggaaacacgcggctggtgcctagcctggacatactgctaatgtggcttgctcaccagagtttcccagtgagctattacgcagacatggcagcgatggccgtcaaggataatgttgcaaaaatagttgtgggttatggggaagtggtgagtgaagagatggtggagagaacaagggtattgtgggaggaggcatacgatgaaccatacgatatggctggatcagagattgataaagcagaagttgatgcagcgagagaagcattctattgggagacagcagcatcagaagaggatgctaatcgactgtacaaagggctgcaacctaggttcattatggaggtatatgtgttcctgaaaggagaatttgacagtgaacacaccagtaaggaattcttacgtttgcggacacagaggtgttacagatcactaaagctcaacataccactgttcaatttatcctgcaaaaactggcaaaaaacatggcacctatattgtgagttttcaacaagaggcctcatcattgaggtcagacgcagcacaagtgggtgcttcaggaacagcaagctcatcaagaacatctcattctcatggagtgatatgttgcatgagaaatccctcatgcttacagaggagcttgatgttaggatgaaagcaatggcatcaatcacccctccggttcaagcaccatacttgttgaagtgcgtacctgaccgagttaccgatgatggtggggctatgatttctgatgtcatattgcggacaaaaggttaccgtccacaagaaggacgatggctgactcgcacggtgcttgatcatagtaggaaagaatgttttgtcattcggataaggcagagggatttggcggagaggtgctga</cdnaseq>

Protein Sequence

<aaseq>MSGPGGREREAAGPAFSFSVDLVAAARRLLALLRSGDGERGGAG VVGPRSVRRYEELWMPLVAAEGAGGEAPMLVPPPDVRLVWLCHCFHHESYAAYCASRF GRLINRPSILDADNEEYAADHCRDVWAAHYPSEPFDLEDNETEGNSSNDKSASEIIEM VQRYTGLAARFASPFISEGVYHVAARRRYMRFLELIKKIVSTTQGNTRLVPSLDILLM WLAHQSFPVSYYADMAAMAVKDNVAKIVVGYGEVVSEEMVERTRVLWEEAYDEPYDMA GSEIDKAEVDAAREAFYWETAASEEDANRLYKGLQPRFIMEVYVFLKGEFDSEHTSKE FLRLRTQRCYRSLKLNIPLFNLSCKNWQKTWHLYCEFSTRGLIIEVRRSTSGCFRNSK LIKNISFSWSDMLHEKSLMLTEELDVRMKAMASITPPVQAPYLLKCVPDRVTDDGGAM ISDVILRTKGYRPQEGRWLTRTVLDHSRKECFVIRIRQRDLAERC</aaseq>

Gene Sequence

<dnaseqindica>3521..3548#2495..3003#1332..1613#852..1247#140..412#acgcttttgaccaaccgctccgcactagcggccgcgccgcgcgcccaccgccaccgcataccacctgcagagctgtgacgcgccacgccacgcccacgcccacgcccacgcccacgcctcgccaccaccttccgcggcgatgtccggccccggcgggcgggagcgggaggcggcggggcccgcgttctccttctccgtcgacctcgtggcggccgcgcgccggctgctcgcgctcctccgctccggggacggggagcggggtggagctggggtggtggggccgcggtccgtgcggaggtacgaggagctgtggatgccgctcgtggcggcggagggggcgggaggggaggcgccgatgctggtgccgccgcccgacgtgcggctcgtctggctctgccactgcttccaccatgtgagagctttacctgcctgccaccttggccgcttcagtaaatgcgtcagatctttggggactaaatgctcgattacgtagagatatcttcaccgatccaaagctcaccttgtttaatcaatatatatatatagtggttgtgcccaatgtcatttagtaagtgtgatcttgagaagaaaaattagacatttcagtatttcactgtgtttagaaacaccgtattgggaaaaaaaatcagtaatggtatattcaccatgccgtctgccgtgcttactcttacggaaattctatgttttcagataaatctctggactgtacataatttctgtacaaaaagtcccacaattttggaaattcatatatatcacttatactgtgattgtggcttatgaaactttcacatgaaatgcgccatctcaagttttctcctgttccccaggagagctatgctgcttactgtgcatcaaggtttggacgcctcatcaaccgtccgtcgatccttgatgctgataatgaagaatatgccgctgaccactgtcgggatgtctgggctgcacactatccatcggagccatttgatcttgaagataatgaaactgaaggaaacagtagtaatgacaaatctgctagtgaaattatcgaaatggttcaaagatatactggcctagcagcccgctttgcctcacccttcatctcagaaggtgtctatcatgttgctgctaggcggagatacatgcgtttccttgaacttatcaagaaaattgtgagtacaacccaaggaaacacgcggctggtgcctagcctggacatactgctaatgtggcttgctcaccaggtatgcataggcatggcatcctatgaagcaaaacaatgcattatggatgttttaattgacactgttattatgtatccttcgcagagtttcccagtgagctattacgcagacatggcagcgatggccgtcaaggataatgttgcaaaaatagttgtgggttatggggaagtggtgagtgaagagatggtggagagaacaagggtattgtgggaggaggcatacgatgaaccatacgatatggctggatcagagattgataaagcagaagttgatgcagcgagagaagcattctattgggagacagcagcatcagaagaggatgctaatcgactgtacaaagggctgcaacctaggttcattatggaggtatatccaaggctaaccccaaacattttttctagggattaggatcattcacttaccctggcatttaatattttttctaatctgcaaatgcttcatttcatttgtttatcctccagagaaaaaagaacttatgcttgacattttcttatctcatagaatggaaaataaggtcctagaggcatcacagtgtagtgcagtagtgccaacaacaatatggaaaaaggcagtagtgaattttaccacgcatgtgaactctgatcatttccacccgaaatgcaagatttcctattgttgattcctcaagtagttggtgtactgagtaactggctaatcatgttcatttatttactttgttgtggccattaagccttgtaccagatataatgattttaacatcgatataatatctgaccaaaaggttctataactacaatttccacactcaaaattgatattagatgtgcttctatgctatccttatacaggactagtgcagactttttcaaccatttgatgagtttatttccctctagccattagcaattgcaaccgctttataatcgcgggatactcttcgaggaaaacacaaacacccttttgtagttttcattgcttaaaaaaatatacatatcagaaacagcctgaaagtctcaaacttcttacaaatggtttgatgctaacttcagctcacacacccactgaaaattcgaaaaaaatctaaataagacatagtgtacctccttaagagtaaaatgaagttttccttctaaattcgttatatgatcatgcaagggaattctcacaaaatgttttgtctttctatcgtaactaatatattccttatatattggtaatatgatataaattattcttgattgcaggtatatgtgttcctgaaaggagaatttgacagtgaacacaccagtaaggaattcttacgtttgcggacacagaggtgttacagatcactaaagctcaacataccactgttcaatttatcctgcaaaaactggcaaaaaacatggcacctatattgtgagttttcaacaagaggcctcatcattgaggtcagacgcagcacaagtgggtgcttcaggaacagcaagctcatcaagaacatctcattctcatggagtgatatgttgcatgagaaatccctcatgcttacagaggagcttgatgttaggatgaaagcaatggcatcaatcacccctccggttcaagcaccatacttgttgaagtgcgtacctgaccgagttaccgatgatggtggggctatgatttctgatgtcatattgcggacaaaaggttaccgtccacaagaaggacgatggctgactcgcacggtgcttgatcatagtaggaaagaatgttttgtcattcggataaggtactgttcaggaaaatgcgccagtaaaatgcatttgatacaccttcagattctactgctgaagtttttcttgatggactatcccgtgcattgcaacaggtttcaaacaaatatatcataaattataaacataaaaatgttgtgtatataacaacaaataatattattacaaaccacatctgtaaatgaccagttgtccacaaagatcctactgactcaagaggtgggatgataggctcactaccactactagttgcttttacatagtagtgataataaatgttctgtttgttcatttgagttcatgctagcaattaccgcattcccaaaatggtctttgatttatatcatatccaaatgaaccatgcaaaccagacaaacattttccgtttatatcaagttgagatcatatgctgaattttgacattggcatgcttaatcttaggggggggaatgatgttttcttctatatcttaatatgcttccactgaacttagctgcaacttatgtagaataggcagagggatttggcggagaggtgctgaaactcccatagcagtgaaatgggaggacagaatcattgagattagagagggttcatggtcatacattgcaaatgcaagctccgtcggttatgctcctggtaacttcagtatgcaaaataattggttctggtttggtacgtatcatatcttgtcttaagagcagatgcttattgctttcactttgtggtgcagagaaggtggtgggaacagcaaccccagaaaaagatcaacaggacagcaaggtggtttggcgcttttcaactggagatgtactgacggtaaagttgggagatgacttaaacttccatattcgaaatgaaagctcaggagaagaggtatggtgtcataagctcctccgtctctgcgcattctgtgtggaattggatttagaatggagtatcttggctttcattctaactgcattgcaatgaaccatattaccaggcaaggcttcttgtagggaggagattgaactacagaataaacaaggaaagcacattaaatgaccgcaatgatgaggaggaataccttaccctagttcgtacatcacctgatcatctaggtgacagagcaactatgctcctcaactggaaactacttgcggtagaattcttacctgaagaggatgcagtttttgtgcttctcctgtgcatggcaatcgcacgaaccatgacagagattaggagagaagatgtatctgggcttttggtacgacgaagaatatgtgaagcgaaggttgggcagagagactggggttcagtgatgctcccaaactcaccttctcttgatcctcatttgcaaccgtggtatcggaatgcagcgcatgtattaagctctgcagaaacagcgtctaacagggtgatgcttatgaagtattcacctgctgatggcaaggatgagttgtacaggaaagctcttataccttaagccccgatggagaattggagatgattcctatcatggcttgtacaggattagttttgagttgtcatttcactaatggtgttgatctttgatacagatctgattatggttgtaaaatatggtttataacaacagaaacttaacattccaccacaaaagggcttgctttttgtttgttcttttgaccaaggatgtgcagtttttttgtactttttgttgagtaaaagtttccattcctttgtgtacattgtaattctgaagggttcaccggttcagtggtgcaaacttcagttccagaatacacatgtttcacttcactgataagattcatcttgtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0347100, RefSeq:Os01g0347100