Os01g0347600

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Revision as of 04:38, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0347600| Description = Peptidase C1A, papain family protein| Version = NM_001049505.2 GI:297596715 GeneID:4326500| Length = 1473 bp| Defin...")
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Gene Name

Os01g0347600

Description

Peptidase C1A, papain family protein

Version

NM_001049505.2 GI:297596715 GeneID:4326500

Length

1473 bp

Definition

Oryza sativa Japonica Group Os01g0347600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:13984931..13986403

Sequence Coding Region

13985531..13986166

Expression

GEO Profiles:Os01g0347600

Genome Context

<gbrowseImage1> name=NC_008394:13984931..13986403 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:13984931..13986403 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgctagctagctgttgctcaccgtcacggatgcatgcagggtcttgctgggcgttcgcggcggtggcggcgatcgaggggctgacgaagatcaggacggggcagctgacgccgctgtcggagcaggagctggtggactgcgacaccaacagcaacgggtgcggcggcgggcacacggaccgggcgttcgagctggtggcgtccaagggcggcatcacggcggagagcgactaccggtacgaggggttccaggggaagtgccgcgtggacgacatgctgttcaaccacgcggcgcgcatcggcgggtaccgcgccgtgccgcccaatgacgagcggcagctggcgacggcggtggcgaggcagccggtgacggtgtacatcgacgcgagcgggccggcgttccagttctacaagtccggggtgttcccggggccgtgcggggcgtcgtcaaaccacgcggtgacgctggtgggttactgccaggacggcgcgtcggggaagaagtactgggtcgccaagaactcgtggggaaagacgtgggggcagcagggctacatcctgctggagaaggacgtcctgcagccgcatggcacgtgcggcctcgccgtctcaccattctaccccaccgtctag</cdnaseq>

Protein Sequence

<aaseq>MALASCCSPSRMHAGSCWAFAAVAAIEGLTKIRTGQLTPLSEQE LVDCDTNSNGCGGGHTDRAFELVASKGGITAESDYRYEGFQGKCRVDDMLFNHAARIG GYRAVPPNDERQLATAVARQPVTVYIDASGPAFQFYKSGVFPGPCGASSNHAVTLVGY CQDGASGKKYWVAKNSWGKTWGQQGYILLEKDVLQPHGTCGLAVSPFYPTV</aaseq>

Gene Sequence

<dnaseqindica>601..1236#atcacaatctcgacatctagcagcatccagtctaaacactaaaaagatcaaagtatcaaacttgaccaagagaaaacaatattgtgttgtagcttagaagtgataagtcacacttgagatgatggcgccttcgcgtccaatggctagtgccgtcctcttggttgtgtgcacgttgatggctttgcaggcaatgggggcggacgcgtactacaacaacggcagcgacgacggcgtgacgatgcagatgttcgaggagtggatggccaagttcggcaagacgtacaagtgccacggcgagaaggagcaccgcttcggcatcttccgcgacaacgtccacttcatccgcggctacaagccgcaggtcacctacgactccgccgtggggatcaaccagttcgccgacctcaccaacgacgagttcgtcgccacctacaccggcgccaagccgccgcaccccaaggaggcgccccgccccgtcgaccccatctggacgccctgctgcatcgactggaggttcaggggcgccgtcaccggcgtcaaggaccaaggcgcctgcggtaagtagctcgccgtcgccggcaccaacgaccgtatatatatatggcgctagctagctgttgctcaccgtcacggatgcatgcagggtcttgctgggcgttcgcggcggtggcggcgatcgaggggctgacgaagatcaggacggggcagctgacgccgctgtcggagcaggagctggtggactgcgacaccaacagcaacgggtgcggcggcgggcacacggaccgggcgttcgagctggtggcgtccaagggcggcatcacggcggagagcgactaccggtacgaggggttccaggggaagtgccgcgtggacgacatgctgttcaaccacgcggcgcgcatcggcgggtaccgcgccgtgccgcccaatgacgagcggcagctggcgacggcggtggcgaggcagccggtgacggtgtacatcgacgcgagcgggccggcgttccagttctacaagtccggggtgttcccggggccgtgcggggcgtcgtcaaaccacgcggtgacgctggtgggttactgccaggacggcgcgtcggggaagaagtactgggtcgccaagaactcgtggggaaagacgtgggggcagcagggctacatcctgctggagaaggacgtcctgcagccgcatggcacgtgcggcctcgccgtctcaccattctaccccaccgtctagccggccatatacatatatcgatcgcagctagccgcatgccggccgtcatcctcagccagttcttcttctttttcctcgccgttagttacaacaagttggaataattaaggaataatgatcgagtagcgtttgcgaggttaactattgaaatgagtgaatggtcctgtttgttcgatgtttaatgcgctggatttcccttgaaaagtacacatgataatgacatacgtactggtggtt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0347600, RefSeq:Os01g0347600