Os01g0349800

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Revision as of 04:39, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0349800| Description = Similar to Cytochrome P450| Version = NM_001049515.1 GI:115436443 GeneID:4326475| Length = 3288 bp| Definition = Or...")
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Gene Name

Os01g0349800

Description

Similar to Cytochrome P450

Version

NM_001049515.1 GI:115436443 GeneID:4326475

Length

3288 bp

Definition

Oryza sativa Japonica Group Os01g0349800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:14083977..14087264

Sequence Coding Region

14084011..14084290,14084450..14084673,14085262..14085515,14085821..14086202,14086718..14087149

Expression

GEO Profiles:Os01g0349800

Genome Context

<gbrowseImage1> name=NC_008394:14083977..14087264 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:14083977..14087264 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgttccttctgttgtgatccccattttggttgtgctggtctcgagactcctgacaagcgccctggtgcacctgttgtggaagccctacgccatcaccaagctgttccgtgggcagggcatcacaggccccaaatacaggctcttcgtcgggtccctcccggagatcaagcgcatgaaggccgccgctgccgccgacgaggtcgccgccggcgcccactcccacgacttcatccccatcgtgctgccccagcacagcaaatgggccacagatcacgggaagacgtttctttactggcttggcgctgtgccggccgtcagcctcggcagggtggagcaggtgaagcaggtgctgttggagaggacggggtccttcacgaagaactacatgaacgcgaacctggaggcgctgctgggcaagggcctcatcctggccaacggcgaggattgggagcgccatcgcaaggttgtgcacccagcgttcaaccacgacaagctcaagttcatgtctgtggtcatggcggaaagcgtggagtcgatggtccagcgctggcaatcacagatacagcaagctggaaataaccaggttgaattagacctaagcagagagttgtcagagcttacttctgatgtgatcacccgctcggccttcggtagcagccacgaggagggcaaagaggtctaccaagcacagaaagagctccaagaactggccttctcatcatcattagatgtgccagctctggtttttctaaggaaattaccaatcataagggggaacacacgagctcatcagctcgtcaagaaatcgaggaccatgctcatggagataatcgaaggacggcttgccaaagtcgaagctgccgaagccggctatggcagtgatcttcttggactgatgctggaggcgcgagctctggagagggaagggaacggcctggttctcaccacccaggagatcatagacgagtgcaagaccttcttcttcgcggggcaagacactacctccaaccacctcgtctggacgatgttcctgctgagcagcaacgctcagtggcaagacaagctacgggaggaggtgctgacagtgtgtggagatgcaattccaacgcccgacatggctaacaggctgaaactggttaacatggttctcttggaatcactgaggctgtacagcccagtagtaatcataaggaggattgctggttcagatatcgatcttggcaacctaaaaattcccaagggaactgtgctttccataccgatcgccaagatacaccgggacagggatgtatggggacccgatgccgacgagttcaaccctgcaaggttcaagaatggcgtgtcgagagccgcgagctacccaaacgcgctgctgtccttctcacagggtccaagaggttgcatcggccagaccttcgcgatgctagagtcgcagatcgcgatcgccatgatcctccagaggttcgagtttaggctgtctccatcgtacgttcatgctcccatggaggcgatcaccttgaggcccaggtttggacttcctgttgtcctaaggaatctccagggatga</cdnaseq>

Protein Sequence

<aaseq>MDVPSVVIPILVVLVSRLLTSALVHLLWKPYAITKLFRGQGITG PKYRLFVGSLPEIKRMKAAAAADEVAAGAHSHDFIPIVLPQHSKWATDHGKTFLYWLG AVPAVSLGRVEQVKQVLLERTGSFTKNYMNANLEALLGKGLILANGEDWERHRKVVHP AFNHDKLKFMSVVMAESVESMVQRWQSQIQQAGNNQVELDLSRELSELTSDVITRSAF GSSHEEGKEVYQAQKELQELAFSSSLDVPALVFLRKLPIIRGNTRAHQLVKKSRTMLM EIIEGRLAKVEAAEAGYGSDLLGLMLEARALEREGNGLVLTTQEIIDECKTFFFAGQD TTSNHLVWTMFLLSSNAQWQDKLREEVLTVCGDAIPTPDMANRLKLVNMVLLESLRLY SPVVIIRRIAGSDIDLGNLKIPKGTVLSIPIAKIHRDRDVWGPDADEFNPARFKNGVS RAASYPNALLSFSQGPRGCIGQTFAMLESQIAIAMILQRFEFRLSPSYVHAPMEAITL RPRFGLPVVLRNLQG</aaseq>

Gene Sequence

<dnaseqindica>35..314#474..697#1286..1539#1845..2226#2742..3173#atctctccactcacaaacaaagcacaagagtaagatggatgttccttctgttgtgatccccattttggttgtgctggtctcgagactcctgacaagcgccctggtgcacctgttgtggaagccctacgccatcaccaagctgttccgtgggcagggcatcacaggccccaaatacaggctcttcgtcgggtccctcccggagatcaagcgcatgaaggccgccgctgccgccgacgaggtcgccgccggcgcccactcccacgacttcatccccatcgtgctgccccagcacagcaaatgggccacagatcacggtacgtacgcatatgcttcttccggccagtgatccctcagctaattaagttcatcatcatatcgatctgtgtagtactccttaattattcagtgacctttcaatcgatgagtgatgtgatgtgatccggccacgtatgtactatgtatgtatggcacagggaagacgtttctttactggcttggcgctgtgccggccgtcagcctcggcagggtggagcaggtgaagcaggtgctgttggagaggacggggtccttcacgaagaactacatgaacgcgaacctggaggcgctgctgggcaagggcctcatcctggccaacggcgaggattgggagcgccatcgcaaggttgtgcacccagcgttcaaccacgacaagctcaaggttaattagttactccctccatccaaaaatataatcatttttagcataataacaagtcaaatatttttaattttgaccattaatagtaaaaaaacttaaaaagatcaatcatataaaataatcatataaaattgatatttactagatttatcattaaacaacctatcataatatgaaactctttttatttaaaacatcataattttatagatattattagtcaaagtagcatctcggagactgtgtcagaatccaaaaatacttatattttaggacagataaagtaattctagctcgatcaactgcgtgttgtgtgttactgtcttcttcaaaccacgtaattagtcttctttctttttcaccgctttccttttttttttcatcaatatacacctaaaactaatagcacaaaaggttatatatagccgatttaaatttagatttaaatatttttatacaaagagagtgtttctatacataatatgcgtgtcgagtttacaatatatatatttattatatttctatatctgacatgttaattagccctgaattagaggatcatatatatcttttgtgtcgatctctcagttcatgtctgtggtcatggcggaaagcgtggagtcgatggtccagcgctggcaatcacagatacagcaagctggaaataaccaggttgaattagacctaagcagagagttgtcagagcttacttctgatgtgatcacccgctcggccttcggtagcagccacgaggagggcaaagaggtctaccaagcacagaaagagctccaagaactggccttctcatcatcattagatgtgccagctctggtttttctaaggtactaaatactcttttcttgccacctaatacatcagttcttatttcttcattcgtaaactacaactaatatatacttcctccgtttcacaatataagtcattttagcatttcccacatttatattgatgttaatgaatctagatagatatatatgtctagatttgatgtgttaatgaatctagatagatatatatgtctagattcattaacatcaatataaatgtggaaaatggtagaatgacttatattatgaaacggagcgagtaattttgtttccttgatcttatggttgttcacacgcaggaaattaccaatcataagggggaacacacgagctcatcagctcgtcaagaaatcgaggaccatgctcatggagataatcgaaggacggcttgccaaagtcgaagctgccgaagccggctatggcagtgatcttcttggactgatgctggaggcgcgagctctggagagggaagggaacggcctggttctcaccacccaggagatcatagacgagtgcaagaccttcttcttcgcggggcaagacactacctccaaccacctcgtctggacgatgttcctgctgagcagcaacgctcagtggcaagacaagctacgggaggaggtgctgacagtgtgtggagatgcaattccaacgcccgacatggctaacaggctgaaactggtacgttgaactttgtctgactgcgtcagggttttcaatttcgaaattggatttttttgccaggggaccgaaattatcgaaatttcgaaaatttcaaaacgaaattgcaaacctactctgagttcgttcggataacttgctgcggcaatttcttcgttctgcacgagcacgctttcaaactgctaaatgttttttatacaaaagttttttcagaaaaaatgaaataaatccattattccagtctcaattagtcatacgcctttcggtttgtctcgtttcccattccaacaaaaatcctgaatgaaccgcccaaacaatcttttttttttaggaaacaacaggagaggctcctaccctactataaaaaaaaagatatttacatagttatgtgtacaaaattaaaaggagtatgcccaaacaaactcacccttcatttactccatccatctatcgattcattttaatttgttgtttttgccctcattttgcatgagaatttatcatttggccttcaggttaacatggttctcttggaatcactgaggctgtacagcccagtagtaatcataaggaggattgctggttcagatatcgatcttggcaacctaaaaattcccaagggaactgtgctttccataccgatcgccaagatacaccgggacagggatgtatggggacccgatgccgacgagttcaaccctgcaaggttcaagaatggcgtgtcgagagccgcgagctacccaaacgcgctgctgtccttctcacagggtccaagaggttgcatcggccagaccttcgcgatgctagagtcgcagatcgcgatcgccatgatcctccagaggttcgagtttaggctgtctccatcgtacgttcatgctcccatggaggcgatcaccttgaggcccaggtttggacttcctgttgtcctaaggaatctccagggatgagatggaccgtacgtactattatatattatacagtgtgtcgatctctacggttcgtgccttcattatatatttgcgcaattttcctttatttatcctacggaaaaggtaatgagtg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0349800, RefSeq:Os01g0349800