Os01g0356900

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Revision as of 04:39, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0356900| Description = Similar to Extensin-like protein| Version = NM_001049541.1 GI:115436495 GeneID:4326290| Length = 1799 bp| Definitio...")
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Gene Name

Os01g0356900

Description

Similar to Extensin-like protein

Version

NM_001049541.1 GI:115436495 GeneID:4326290

Length

1799 bp

Definition

Oryza sativa Japonica Group Os01g0356900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:14580549..14582347

Sequence Coding Region

14580743..14582254

Expression

GEO Profiles:Os01g0356900

Genome Context

<gbrowseImage1> name=NC_008394:14580549..14582347 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:14580549..14582347 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcaccctcccaccattcccgcccctcctcctcctcgtcgccgtcatcttctccttcctctcctcgtcgtgctttgctgtgaccagccatgaggcggcggccatcgcgcggcgccagctgctcaacttcgagaagcacggcgaccacgtccacatcgatatcgacatcgagatcaaggtgagcaacccgcggctggcggcggcgcacagggcgctgcacgcgctgaagcgggcgctctactccgaccccggcaacttcaccggcgactgggccggccccgacgtgtgcgcctacaacggcgtgctctgcgcgccgtcgccggacaacgcgtcggcgagcgccgtcgcgtcgctggacatgaacgccgccgacgtcgcgggctacctgcccagggagatcggcctcctgtccgacctcgccgtgctccacctcaactccaaccgcttctgcggcgtcatcccggaggaggtcgccaacatgacgcggctctacgagctcgacgtcagcaacaaccgcctcgtcggcgcgttccccggcgcggtgctccgcgtccccgagctcagctacctcgacatccggttcaacgacttcgacggccccattccgccggagctcttcctccgcccctacgacgccatcttcctcaacaacaaccgcttcacctccggcatcccggacaccatcggcaggtccaccgcgtcggtcatcgtcctcgccaacaacgacctcggcggctgcatcccgcccaccatcggccaggccgccgccacgctcgaccagttcgtcttcctcaacaacagcctcaccggctgcctgcccctcgagtcgggcctcctcgccaacgccacggtgttcgacgtcagccacaacctgctgaccggcgccatccccgcgacgatgggtggcctggccaaggtcgagcagcttgacctgtcgcacaacaccttcaccggcgttgtgccgggcgacgtctgcgggctgccggcgttgacgaacctgtcggtctcgtacaacttcatcgccggggaagacgcccagtgcagcagcgcgctgctggatgcgaagctcgacaagtcgttggaggacgaggctaactgcatgggcaacgtgaggccgatgcagaggagtgccggtgaatgtgccccggtcgtgagccatccggtggattgcagcaagaccaagccctgtggatggccggcgccggcgaagaagccagcgccggagagctcaaagcattcaccgccgccgccgccgccaccagcaccggtacaatccccgccaccaccggcaccggtggtatccccgccatcgccagtgttctctccaccgcctgccttctcgccgccgccgccgcccaagacatctcctccaccgcctgtctcctcgccgccgccaccgccaccgccgactatgtccccgccgccgccaattcaagagcccgtcatcctcccgccaatattgtcagcaaaataccaatcgccaccgccaccgtttttcgaaggatactga</cdnaseq>

Protein Sequence

<aaseq>MGTLPPFPPLLLLVAVIFSFLSSSCFAVTSHEAAAIARRQLLNF EKHGDHVHIDIDIEIKVSNPRLAAAHRALHALKRALYSDPGNFTGDWAGPDVCAYNGV LCAPSPDNASASAVASLDMNAADVAGYLPREIGLLSDLAVLHLNSNRFCGVIPEEVAN MTRLYELDVSNNRLVGAFPGAVLRVPELSYLDIRFNDFDGPIPPELFLRPYDAIFLNN NRFTSGIPDTIGRSTASVIVLANNDLGGCIPPTIGQAAATLDQFVFLNNSLTGCLPLE SGLLANATVFDVSHNLLTGAIPATMGGLAKVEQLDLSHNTFTGVVPGDVCGLPALTNL SVSYNFIAGEDAQCSSALLDAKLDKSLEDEANCMGNVRPMQRSAGECAPVVSHPVDCS KTKPCGWPAPAKKPAPESSKHSPPPPPPPAPVQSPPPPAPVVSPPSPVFSPPPAFSPP PPPKTSPPPPVSSPPPPPPPTMSPPPPIQEPVILPPILSAKYQSPPPPFFEGY</aaseq>

Gene Sequence

<dnaseqindica>94..1605#aaacatcacgctgcgatgtctcccccctccatgacctcctcctctctttagccattggcttcggccaaggctgatgagacattcctaaccaccatgggcaccctcccaccattcccgcccctcctcctcctcgtcgccgtcatcttctccttcctctcctcgtcgtgctttgctgtgaccagccatgaggcggcggccatcgcgcggcgccagctgctcaacttcgagaagcacggcgaccacgtccacatcgatatcgacatcgagatcaaggtgagcaacccgcggctggcggcggcgcacagggcgctgcacgcgctgaagcgggcgctctactccgaccccggcaacttcaccggcgactgggccggccccgacgtgtgcgcctacaacggcgtgctctgcgcgccgtcgccggacaacgcgtcggcgagcgccgtcgcgtcgctggacatgaacgccgccgacgtcgcgggctacctgcccagggagatcggcctcctgtccgacctcgccgtgctccacctcaactccaaccgcttctgcggcgtcatcccggaggaggtcgccaacatgacgcggctctacgagctcgacgtcagcaacaaccgcctcgtcggcgcgttccccggcgcggtgctccgcgtccccgagctcagctacctcgacatccggttcaacgacttcgacggccccattccgccggagctcttcctccgcccctacgacgccatcttcctcaacaacaaccgcttcacctccggcatcccggacaccatcggcaggtccaccgcgtcggtcatcgtcctcgccaacaacgacctcggcggctgcatcccgcccaccatcggccaggccgccgccacgctcgaccagttcgtcttcctcaacaacagcctcaccggctgcctgcccctcgagtcgggcctcctcgccaacgccacggtgttcgacgtcagccacaacctgctgaccggcgccatccccgcgacgatgggtggcctggccaaggtcgagcagcttgacctgtcgcacaacaccttcaccggcgttgtgccgggcgacgtctgcgggctgccggcgttgacgaacctgtcggtctcgtacaacttcatcgccggggaagacgcccagtgcagcagcgcgctgctggatgcgaagctcgacaagtcgttggaggacgaggctaactgcatgggcaacgtgaggccgatgcagaggagtgccggtgaatgtgccccggtcgtgagccatccggtggattgcagcaagaccaagccctgtggatggccggcgccggcgaagaagccagcgccggagagctcaaagcattcaccgccgccgccgccgccaccagcaccggtacaatccccgccaccaccggcaccggtggtatccccgccatcgccagtgttctctccaccgcctgccttctcgccgccgccgccgcccaagacatctcctccaccgcctgtctcctcgccgccgccaccgccaccgccgactatgtccccgccgccgccaattcaagagcccgtcatcctcccgccaatattgtcagcaaaataccaatcgccaccgccaccgtttttcgaaggatactgataatctagtttgaggccatgagtgatgtgttgttgtccgacactagtacagaaaacgtcgaatgtaatataagctcatgctttaaccacattgagggtgcccatttacctttccatttttaatgctgtttttgacctggtttcaggattaactgctggctggtctgaagaaataaagaggggtggaattaaagt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0356900, RefSeq:Os01g0356900