Os01g0385600

From RiceWiki
Revision as of 04:41, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0385600| Description = Homeodomain-like containing protein| Version = NM_001049635.2 GI:297596819 GeneID:4325433| Length = 2146 bp| Defini...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0385600

Description

Homeodomain-like containing protein

Version

NM_001049635.2 GI:297596819 GeneID:4325433

Length

2146 bp

Definition

Oryza sativa Japonica Group Os01g0385600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:16403793..16405938

Sequence Coding Region

16403793..16403809,16404649..16405015,16405102..16405282,16405868..16405938

Expression

GEO Profiles:Os01g0385600

Genome Context

<gbrowseImage1> name=NC_008394:16403793..16405938 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:16403793..16405938 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgggctcatctgcatatcgtcctcctactgatgccaagacggacgtccaaattgatttggaacaatggggactagaatctcgcccgctcggtggtttggttgattttatcaaaaacaccacggaccctatgcaccatgtgactgaagggtgtcagttgcagccaattaatgttgagaatggcaacaatggtaattccactaggaccgagaagcgcctaggctggtcaactgaagaagacttgaggctggtcagtgcttggttaaacaactcaaatgatccgatagaatcgaatttcaaaaagaatgataaatattgggctgatgttgctgctgcttacaatagcactactccgtcaagccggtttaggcaagttaagcaagttaaggaccgttttagtaagatcaagaaaaaagttgggaatttttgttgctcttggaaggaagctaattcattatatgctagtggggagtgtaatgttgatctcatggccaaggcgcagaaaatatatgagaatgacttcaaggatgggccattcttgcttactcagtgttggaatgaactaaaaactcaacccaaatgtcatgcatatttggatcagcttgacaagttaacgagaacaattaggctttga</cdnaseq>

Protein Sequence

<aaseq>MAGSSAYRPPTDAKTDVQIDLEQWGLESRPLGGLVDFIKNTTDP MHHVTEGCQLQPINVENGNNGNSTRTEKRLGWSTEEDLRLVSAWLNNSNDPIESNFKK NDKYWADVAAAYNSTTPSSRFRQVKQVKDRFSKIKKKVGNFCCSWKEANSLYASGECN VDLMAKAQKIYENDFKDGPFLLTQCWNELKTQPKCHAYLDQLDKLTRTIRL</aaseq>

Gene Sequence

<dnaseqindica>2130..2146#924..1290#657..837#1..71#atggcgggctcatctgcatatcgtcctcctactgatgccaagacggacgtccaaattgatttggaacaatggtacatttattatttggctttatcagttctgattttgatatgcttctgtttccctgtctaatattcagagttccatggtcattattgttttgatccataacagcgctagtgcaatgatttgtttaggggaaaaaaaggtgattttgttctgataatcaggttaccgtagtaacttggcccatgtaatttggtctgcaatgatttgtatcatatatttatgcagtaatttggctaagtaaaaacaagagtccaatgttacatgtagggtaatcatgctagggtaattagcagtggtggtaaccatgtatttatgcagtaatttggcaaagtaaaaacaaaagtccaatgttacatgtattgctaatttgttttagattcgagcactcatttaccactatgtactaaaataaaataattttgagttcaaaaataaaataaaataattttgattgcacttatcaatataccattatactggggtaatattgggttaggccttgcattgatcaagattggcttgttcattcctttttatatatgggacataacttgatcaagatttccatgttcatgattttcatataggggactagaatctcgcccgctcggtggtttggttgattttatcaaaaacaccacggaccctatgcaccatgtgactgaagggtgtcagttgcagccaattaatgttgagaatggcaacaatggtaattccactaggaccgagaagcgcctaggctggtcaactgaagaagacttgaggctggtaagtgtcttacgcgagttatttatttggtagtggcattcataatacttgcaatttaacaatagtaaaatatttggaaattgtaggtcagtgcttggttaaacaactcaaatgatccgatagaatcgaatttcaaaaagaatgataaatattgggctgatgttgctgctgcttacaatagcactactccgtcaagccggtttaggcaagttaagcaagttaaggaccgttttagtaagatcaagaaaaaagttgggaatttttgttgctcttggaaggaagctaattcattatatgctagtggggagtgtaatgttgatctcatggccaaggcgcagaaaatatatgagaatgacttcaaggatgggccattcttgcttactcagtgttggaatgaactaaaaactcaacccaaatgtcatgcatatttggatcagcttgacaagttaacgagtctcgcgggtttccgggtatgctaggtagtattgattgtatgcactggaggtgttaaagttgtccgagggcttggaggggtcaattctcccgtggtgattacaaagtcccaacaattatcctcgaagcagttgcttcatacgacctatggatttggcataccttctttggtgtcgctggttctaacaacgacatcaacgtgctgaatcagtcccctcttttccttgacacagtaagaggtgaggctcctcaggtccattattatgtcaacgggaaagagtacaaccatgagtattacctagctgatggtatatatcctgaatgggctgtattccagaagactataccacttccacaaacagagaagcataagttatatgctgaacatcaagagggggcgagaaaagatgtggagcgggctttcggggtattgcaagctcgtttcaacaatgtacgtcgtccggcaaagaaatggaagagaaagagtgttggaaatattatgctagcttgcgtgattctccacaatatgattgttgaagacgagggcgaggatgcaatatgtgacctagacctcaatagaattcctaggacatcaatagtactgcctccagaagtaaccagtggtggtaacccatgttttcgtgatgtgctaagtaggaaagctgctattcgtgctcgttcgatgcatacccagcttaaaactaatttacttgagcatatttggaaccggttccggaatacgcagcgtgcataaccatggtagggtaattagcatataatttcccctttttgtcatatatagagccttttaatttacccttctatatgttttatttcaggaacaattaggctttga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0385600, RefSeq:Os01g0385600