Os01g0393400

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Revision as of 04:41, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0393400| Description = Conserved hypothetical protein| Version = NM_001049655.2 GI:297596847 GeneID:4324533| Length = 1741 bp| Definition ...")
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Gene Name

Os01g0393400

Description

Conserved hypothetical protein

Version

NM_001049655.2 GI:297596847 GeneID:4324533

Length

1741 bp

Definition

Oryza sativa Japonica Group Os01g0393400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:16963638..16965378

Sequence Coding Region

16963638..16963752,16963831..16964032,16964764..16964879,16965338..16965378

Expression

GEO Profiles:Os01g0393400

Genome Context

<gbrowseImage1> name=NC_008394:16963638..16965378 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:16963638..16965378 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacaccggtgaggtcgtcggtcgtcttgagaatgtgtgacaagatcggtaattttgtccatcttcttgtcacattcctgagcagcttcgcagtggccttcgcgcagcagaacagttgcgtcatgaagagcacgtacagctccaacgttccggagaacgtcgcagccggcatggccatgggcacggtcatagtgctcctcttctgtggctactccctggggatttcttatgatgccaagctgatcctggagaagggatatacatgcaccggagcacaagtgatgaatgtcatattcgtcgtgctcatcggcttgctagcttcaggtcaggcatctccaagcatgagagagtttgcaggaggccaggctgcagtatacaagatattggaaacaatcaacagggaacctaagatcgatgcatacagcaccacagcgtctaatttacctatcaatattcaagaatcatattactag</cdnaseq>

Protein Sequence

<aaseq>MTPVRSSVVLRMCDKIGNFVHLLVTFLSSFAVAFAQQNSCVMKS TYSSNVPENVAAGMAMGTVIVLLFCGYSLGISYDAKLILEKGYTCTGAQVMNVIFVVL IGLLASGQASPSMREFAGGQAAVYKILETINREPKIDAYSTTASNLPINIQESYY</aaseq>

Gene Sequence

<dnaseqindica>1..115#194..395#1127..1242#1701..1741#atgacaccggtgaggtcgtcggtcgtcttgagaatgtgtgacaagatcggtaattttgtccatcttcttgtcacattcctgagcagcttcgcagtggccttcgcgcagcagaacagtaaacattcagtcttcccttcagttaactttgtgtacatgtcgccatgtctctgaacattcggtccgacaaatgcaggttgcgtcatgaagagcacgtacagctccaacgttccggagaacgtcgcagccggcatggccatgggcacggtcatagtgctcctcttctgtggctactccctggggatttcttatgatgccaagctgatcctggagaagggatatacatgcaccggagcacaagtgatgaatgtcatattcgtcgtgctcatcggcttgctgtaagtttctcggccatcctcctaatcaattcagttgcattgttctcgtgattgacaaatggtttccttgtaagaaatattatgagtataaaagtttttaggattgaaaaaaataatatcatcatagaattttcagttagttatttggtgactgataaaatggtctttacccattggagtattttgattttgtgctgatttagacatgttcggccaggacaaaaaaaaggtaagttagctgctgtttgacacttgacagtaataagggattgttttcgttaacatcctgctaaaccaactgtgtgcacgtatattttgttttcgtgaacatcctgctaataagggattgttcagttagcagcaacaaactaagagcatatccactttatattttggtgtcaacacaataccaattcactgtcacaaaagttgaattatctcattcgacaaaggcaataatgcaacacaggccttttggatttacgtcaattgtattttcatagcgtcttcttttattaaaaaattgcttcttctcatctctttttccttcaaaaagaaccttatcagacaatttcagtatatgagttttcaatagtcaatgaattagctactacagtcggtatgtgctattgtatgttttccatgattgtatatgatatttcttttcaattaaactaacagtaactacttattagttccagaagctgaaactttactgttgcattcaccagagcttcaggtcaggcatctccaagcatgagagagtttgcaggaggccaggctgcagtatacaagatattggaaacaatcaacagggaacctaagatcgatgcatacagcaccacaggtaggaagctagatgacattcaaggggatattgagttcataagtgtttacttttcgtacctggcactaccatggtccaatgagaaaatattcagtgttctcgcttgccatacaaagtggtacaactgttgcatgcatttgttcagagctaccgattggcccatttgggattttgaaaattggattagctaaatttctgttgacatttttttcctaccattttcagttagccatgcactgcggtcagcgtcatgttttctgttgccggtgcacgtctcaagagccaggaaatgtataacttgaggagcttacaggtactactacagttctgctattggtaggtgctctcaaacatatgtgggatatgcttcaatggggacatatatatgtagaatgttttgagttgcagtaatgatttatgattgtgtgcatctgctttgtttttgtttattgctgcagcgtctaatttacctatcaatattcaagaatcatattactag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0393400, RefSeq:Os01g0393400