Os01g0521400

From RiceWiki
Revision as of 04:42, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0521400| Description = Conserved hypothetical protein| Version = NM_001049746.1 GI:115437099 GeneID:4323950| Length = 4545 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0521400

Description

Conserved hypothetical protein

Version

NM_001049746.1 GI:115437099 GeneID:4323950

Length

4545 bp

Definition

Oryza sativa Japonica Group Os01g0521400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:20250134..20254678

Sequence Coding Region

20250919..20250923,20253017..20253069,20253147..20253222,20253353..20254433

Expression

GEO Profiles:Os01g0521400

Genome Context

<gbrowseImage1> name=NC_008394:20250134..20254678 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:20250134..20254678 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggttgggtatcgaatggtgttgttggctcacctgcatttgcagcatatgatcaaggttatgatgtttttcttggaaatctgcgtggtttagtctccagggagcatgttgataaaaatatttcttcctacaagtactggaaatattctgttaatgaacatggaaccaaagatatgccagcaattgttgaagaaattcacaagattaaaacttcagaacttggcaaaagtagacctcacataagtgaggaaacagaagatcaaaacgataagataaaaaatttggaagtgcaggcttcacaggacgatgaaagagacaatcaaccatacaagctttgtgctgtctgccacagcttgggtggtgcggtgatgttaatgtatgtggtgacatcaaggattgcgcagaagccccacaggttatcaagattggtcttgctatctcctgctggctttcatgaggattctaatgtggtgttcagcatggtagaaaagctcattttgtttgttggaccagtactagctccatttatacctggcctttacataccaacacgtttcttccggatgctactgaacaaattggccagggatttcaacaactatccagctttgggcggccttgtccaaactcttatgggctatgtagttggcggtgacagttcaaattgggtgggagtgctcgggttgccacactacaacatggatgacatgcctggtgtatcattccatgttgcacttcaccttgcacaaataaagagggcaaaaaggttccaaatgtatgactatggaagtccagtagcaaatatggaagcatatggaacaccagaacccttggacctgggagctcattatggtctgattgacatcccagtagatttagtcgctgggcaaagagacagagttatctcaccatccatggtaaagaagcactataagctgatgcgcaaggctggtgtagaggtttcctacaatgaattcgagtacgcccacttggatttcacattctcccatagggaggagcttttgtcctatgttatgtcccgcctgctcttagtgtctgacccaggtaaaggccgcatcaagcagactagtgtccgccttagaaagctgaagaaagctcagtcagaaattgagaatgactctgacagcaaggagcacaatggcatagataatgtggttacagatgagcaaaatgggcatgtgcatgctgcgtga</cdnaseq>

Protein Sequence

<aaseq>MGWVSNGVVGSPAFAAYDQGYDVFLGNLRGLVSREHVDKNISSY KYWKYSVNEHGTKDMPAIVEEIHKIKTSELGKSRPHISEETEDQNDKIKNLEVQASQD DERDNQPYKLCAVCHSLGGAVMLMYVVTSRIAQKPHRLSRLVLLSPAGFHEDSNVVFS MVEKLILFVGPVLAPFIPGLYIPTRFFRMLLNKLARDFNNYPALGGLVQTLMGYVVGG DSSNWVGVLGLPHYNMDDMPGVSFHVALHLAQIKRAKRFQMYDYGSPVANMEAYGTPE PLDLGAHYGLIDIPVDLVAGQRDRVISPSMVKKHYKLMRKAGVEVSYNEFEYAHLDFT FSHREELLSYVMSRLLLVSDPGKGRIKQTSVRLRKLKKAQSEIENDSDSKEHNGIDNV VTDEQNGHVHAA</aaseq>

Gene Sequence

<dnaseqindica>786..790#2884..2936#3014..3089#3220..4300#tatcgccatcctttgaacacggattctcggacatgtgaagatgttatcactgagcttgggtaggtgatcgacctatatgttagtatggtttagtaatagaatcgtaaacatgtatgtatattgttcaaacttaatggatgcataatcctgaatgagcatttttagcattttaaggtgttttagtactgtttactcagttgcatttgccacaaatttgtgggtatgtcctttccagtgattttctgcttttcgttatatttgctttgtgtcaaattgttgctaagggcttgcgttggtgttattctaatagatctagttatccttgacgcttgagctatgcttgaatttcaagatgtgttacccattattttttaggttttatcagtcaagtgcgtaatttttctcgtgtcaaatgaatctggaccatgttttggttaatgtgcgaattcctataattgtttatgaatctagagtcttgtacgatctctattttctgttcagtcagttcggtttattttgcattaaatccttttgcatcagtgttcattgtcaaattgttaatctcatcacatctttttcaggtacccttttgaggctataaaagttgttacttcagatggatatgtcctactgctggagagaattccaaggtatgaattataattattgcatgttaatatatttctcaacagttgtgttacggagattgagatatgaagcatccaatttttaggcgtgattcacagaaggtggtattgctgcaacatggaatactggactcatcaatggggtgagtcacaatcaaatgcttagtcatgatggcgtttctaatttcttacatgtttggtgttggttctttataaatgtattttaatttgttagttgtatgccgtttgatctgttgctgttgttccttttttctctatttatgtatttatattggcattaccttcccacttaatagactgtaaaaacaagccaattgataggaaagaggttgccctgagttagcttgtccttgactagttggataatatgatttgtatgcgaattggaccctgactgtagttgatgcgataaggtgatggctttttactccagtaatgaatagttgatattgagaaatatgagctggtatagtaggttttgatattgaagttgatgctattctagaaaaatttcaggtgctgcctttgctgttcgcttttatactaaattactaatgactcagcagaccataaaatttagggatggcaattttccccatgggtccgggtatccgcggatacctggcccaatgggcatgggcatgggtgtaatattttgcttgtgggcatgcccacccgagacccgacaatgtggtgggtagcagcagggtctcattttttacccgcgggtaacccatgtccaacccggtatatgtattattgattttggcacataccttcattctcattccccttccttttggcccatttggcccattagcaatggacatatgtatagccaagtttcagggaaaccaaccacatgttgcacgccactagccagcttccaccaggcggtaaccccaccacccaccggcccccgaaacccaactcctctctctctctctctctctctctctgtgtgtgtgtgtgtgtctctctcatcaccgccaacgcgtcaacgcgtcaagcagagagggagaagcgaagcgaggtgagcggaaacgcggccagctgctgtggcagcaaaagcgagaggcaaagtagatgaagccaaagcaagtcatggattagggggagagagagaagggaagcgcggcgaggaggtggaggaggccggaggcgggcgatggcgaggcaaggtgtcgtcggcggtggcggctgcgagattatgcatgctggtagcggcagcggcatcattatcaagtcgacgaccacgccggcggtgagcccctaccaggtgagaccgtgagaccagcgcagtgcctcccgtttcccccctccttccctcgcttggtgtgctcacgctgtgtagtcaatggtttgcttgttgctggcttttggttgctgagtcctagcgtgactacgtgactcctaccgccctcatctctctatcgctgctcgcctgccattgtcgtcgtctctccgtcacctggtctatggatccggtcgccatgggctctcctctccgttgccagatctgaccagccgctaccgtctccacctccacctcttcctcaccggtcgccaccgtgcctccatggctccacctccaggtcttcctcaccggctgcgaccacctccacaactacctcttcctcacccttgatgcaccagttgggcacccgtcgggcatgcctgtgcccgacgggcatgggcacgtgcatgagattttacccgatagactttgcgggcgtgggtcgggcgtgggcacatgggtcttgggtcaggcatggaatcactctgcccgtgcccgacccagcccgctgccatccctaataaaattcgatgatccacaatcttgctattgatcatcatatcagacttgggatttataatgtagttgctcctgactgataatgtcgtaagctgaatgtcacaatatccactctgagaatctgtttctgcagttatattagttccttaaagaactttgacatcaaagcgctaatgtttgtttataatcgaatgatcaattcacacatacaaaagtatgagcacactatgttactgtgttgttgaagatcgtactgttaatgtttttcagtaaaatgaaaatatgcagtagtggttagtcaaataaacttcaaatagttttgtatctatccagtttctatgtagtttatctgaagcatacagtttggtttcccctgattccatgtcgtttctcttgcagttgggtatcgaatggtgttgttggctcacctgcatttgcagcatatgatcaaggtcagtatttaaaactggatataatatactgcagatgtatggagtgaatgctaaaaatcctttatgggtgaatgcaggttatgatgtttttcttggaaatctgcgtggtttagtctccagggagcatgttgataaaaatatttcttcctacaagtaagtaatgcagtaatactagcaaagcatatcaggttttttactgcatgcaggaaatctattgtaggttatgtcattttggtctctgtatttttttcatgtcttatttgtttttgtctatccatgctaggtactggaaatattctgttaatgaacatggaaccaaagatatgccagcaattgttgaagaaattcacaagattaaaacttcagaacttggcaaaagtagacctcacataagtgaggaaacagaagatcaaaacgataagataaaaaatttggaagtgcaggcttcacaggacgatgaaagagacaatcaaccatacaagctttgtgctgtctgccacagcttgggtggtgcggtgatgttaatgtatgtggtgacatcaaggattgcgcagaagccccacaggttatcaagattggtcttgctatctcctgctggctttcatgaggattctaatgtggtgttcagcatggtagaaaagctcattttgtttgttggaccagtactagctccatttatacctggcctttacataccaacacgtttcttccggatgctactgaacaaattggccagggatttcaacaactatccagctttgggcggccttgtccaaactcttatgggctatgtagttggcggtgacagttcaaattgggtgggagtgctcgggttgccacactacaacatggatgacatgcctggtgtatcattccatgttgcacttcaccttgcacaaataaagagggcaaaaaggttccaaatgtatgactatggaagtccagtagcaaatatggaagcatatggaacaccagaacccttggacctgggagctcattatggtctgattgacatcccagtagatttagtcgctgggcaaagagacagagttatctcaccatccatggtaaagaagcactataagctgatgcgcaaggctggtgtagaggtttcctacaatgaattcgagtacgcccacttggatttcacattctcccatagggaggagcttttgtcctatgttatgtcccgcctgctcttagtgtctgacccaggtaaaggccgcatcaagcagactagtgtccgccttagaaagctgaagaaagctcagtcagaaattgagaatgactctgacagcaaggagcacaatggcatagataatgtggttacagatgagcaaaatgggcatgtgcatgctgcgtgatgtgatcatgtggaatatgctgaacatttgttgttagtttgtgaatagaacacgtgctgcctctggcatataccttctgcaacatgtagaagatgtgaggatggatagagcccagttctttctagcagtagttgtgttgatggggattgttttttatgtatccctgtaggagaacaagacaagtatatgtaatacatgaatagtggctatagtgttgttcatatatatcaagaactgacagggag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0521400, RefSeq:Os01g0521400