Os01g0521600

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Revision as of 04:42, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0521600| Description = Similar to NBS-LRR type resistance protein (Fragment)| Version = NM_001049748.1 GI:115437107 GeneID:4323952| Length ...")
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Gene Name

Os01g0521600

Description

Similar to NBS-LRR type resistance protein (Fragment)

Version

NM_001049748.1 GI:115437107 GeneID:4323952

Length

2817 bp

Definition

Oryza sativa Japonica Group Os01g0521600, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:20270588..20273404

Sequence Coding Region

20270588..20270793,20271082..20273404

Expression

GEO Profiles:Os01g0521600

Genome Context

<gbrowseImage1> name=NC_008394:20270588..20273404 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:20270588..20273404 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgaagccgtgattcttttagctgtgaagaagatttgtgttgccttgggaaatgaagcaatcaaccaagctacttcaaaattcaaaaagtttgtttcgcagataacagagcttcaaggaagcatgggccgcatcaagagggagctcaggctgatacatcaattcctttctcgaatggatgtacgcaatcgcaataatgagacgtcccaacatctagcaagcatttcacgctcccttggtgaagaagatcttgttggggtcaatcaaaatagagaaacacttgaagagtggctggcagatgatttgttggaacgttcagtaattacgctgcatggaatgggagggcttggaaaaacagccttggcagcaaatgcatacatgagggagaaagaaaagtttcagtgtcatgcatgggtctcgatttctcaatcttactgcatcaaggatgttctaaaatgtttgatcactgaactttccagaaatgtgaaaaagactaattggggtaacattactgacatggatactggaggttttcgtgaagagctgaagagattcctaaagctccagaagtgtttgatcgtattggatgatgtttgggcgccagaagtaatcaatgatttgtttggagcacatgttcctaatctcaaagggagcagaatacttgtgacaacacgtatcgatgatgtagctcaacttgctttcccagacaggagaataacattagaacctctatgtgagaaggaatcatgggaactcttctgtagaacagcttttccaagggagacaaatcatgagtgcaatgcagaactgttgcacttgatagatcaaatagttagcaagtgtaagggggttcctctggcaattgtctctattggcaggcttgtctttgtgcgtgacaagaccaaagaggaactgaggagaatacatgaccagctcgactgggagttaataaataatccaagcctggaacatgtcaggaatatcctttacttgagctacatttaccttccaacacagttgaaaagttgtttcctatattgcagcttgtttccggaggatcatcttctcaaaagaaaggcattaatacggtggtggatagcggagggattcatcagtaagaggggtagaagcacaatggaggaagtggctgaagggtatctacaggaattggttaacaggaacatgctacaactaattgacaggaattcatttggcaggataaaatcattccggatgcatgatatcatgcatgagttggcggttgacttgtgccgaagagaatgttttggcgttgcatatgatgaagataatagacgttgggaacatgaggatagagatgaacgccgattggtagtacacaaacttaataaggacattgatcaagaaatttcttgtgcgcatagtcttcgatcagtcattacattggataatagtatgatatcatcatccagcatactatgtctagtagtggacaattgcagatatatgtcaatactggagttaagtgggctacccatcagcacggttccagatgctattggagatctattcaatctccgccatttaggtcttcgtggttcaaatgtgaagtttctcccaaagtctatcgagaagctaaccaacctgttaacactagacctcttcagatctagcatactggagcttcctagaggcattgtcaagctgacaaagcttaggcacttgtttgctgagaaacagactgatcgacatcggcgccttttcaggtggtgcactggtgtaagcatccccaggggccttgagaacttgacaagcctacaatccctacaagcactggaagctcaggatgagtctgttagatgcttaggagagctcaggcagatgagaggtctcagattatggaaagtgaaggcaagcctctgtgaacgcctctatgagtcgctgcttcagatgaaatgtttgtcctacctaagtatcacggcaagtgatgaggatgatgttctccagttggatggcttgaacccccttcctccaagccttcataaactacgtttaagtggacgattggcacacaccatgttgggtgcagagtctcctctattccaagaagatgccgggggacgaaatctgtactcgttgcgcctattttggtcccaactaaaagaggatcccttgccatccctttctcggttgttaaatctaacagagctacatttcaccagagcctacaacggagagaagctggtcttccttactagatggtttcccaagctgaaggttctacgtttaagagacttgcctaatctaaagaggatggatattcagcaaggtgccatggtgagccttgaaagattaagactaataaacctaagcagcatggaagaggtccctctaggcattgagtttctcatgcccctcaaatatctaagcttcgaggagatcactgttgacttcttactgtcattgcgccaatctagaattggtggtatgcgatggtggcacactttacgagaggagaatgatatggaagctggtgtaagaacgtag</cdnaseq>

Protein Sequence

<aaseq>MAEAVILLAVKKICVALGNEAINQATSKFKKFVSQITELQGSMG RIKRELRLIHQFLSRMDVRNRNNETSQHLASISRSLGEEDLVGVNQNRETLEEWLADD LLERSVITLHGMGGLGKTALAANAYMREKEKFQCHAWVSISQSYCIKDVLKCLITELS RNVKKTNWGNITDMDTGGFREELKRFLKLQKCLIVLDDVWAPEVINDLFGAHVPNLKG SRILVTTRIDDVAQLAFPDRRITLEPLCEKESWELFCRTAFPRETNHECNAELLHLID QIVSKCKGVPLAIVSIGRLVFVRDKTKEELRRIHDQLDWELINNPSLEHVRNILYLSY IYLPTQLKSCFLYCSLFPEDHLLKRKALIRWWIAEGFISKRGRSTMEEVAEGYLQELV NRNMLQLIDRNSFGRIKSFRMHDIMHELAVDLCRRECFGVAYDEDNRRWEHEDRDERR LVVHKLNKDIDQEISCAHSLRSVITLDNSMISSSSILCLVVDNCRYMSILELSGLPIS TVPDAIGDLFNLRHLGLRGSNVKFLPKSIEKLTNLLTLDLFRSSILELPRGIVKLTKL RHLFAEKQTDRHRRLFRWCTGVSIPRGLENLTSLQSLQALEAQDESVRCLGELRQMRG LRLWKVKASLCERLYESLLQMKCLSYLSITASDEDDVLQLDGLNPLPPSLHKLRLSGR LAHTMLGAESPLFQEDAGGRNLYSLRLFWSQLKEDPLPSLSRLLNLTELHFTRAYNGE KLVFLTRWFPKLKVLRLRDLPNLKRMDIQQGAMVSLERLRLINLSSMEEVPLGIEFLM PLKYLSFEEITVDFLLSLRQSRIGGMRWWHTLREENDMEAGVRT</aaseq>

Gene Sequence

<dnaseqindica>1..206#495..2817#atggctgaagccgtgattcttttagctgtgaagaagatttgtgttgccttgggaaatgaagcaatcaaccaagctacttcaaaattcaaaaagtttgtttcgcagataacagagcttcaaggaagcatgggccgcatcaagagggagctcaggctgatacatcaattcctttctcgaatggatgtacgcaatcgcaataatgagacgtatgaaatctgggtggaagagataagaatgctggcacatggaattgaagatactgtggatgattacctgcaacttgtttcccataaacatgatactggatggagtacctatctgaagaaaggattcacacgaccaaatattctgctctctttaaacaagatagcattgtccattaaggatgcagaagccaacctgatgcacctattctaggcgaaagaccgatgggtttcgatggtaggtgatggtaataatcctagtaatgacagctcaaattacattgttgagaggtcccaacatctagcaagcatttcacgctcccttggtgaagaagatcttgttggggtcaatcaaaatagagaaacacttgaagagtggctggcagatgatttgttggaacgttcagtaattacgctgcatggaatgggagggcttggaaaaacagccttggcagcaaatgcatacatgagggagaaagaaaagtttcagtgtcatgcatgggtctcgatttctcaatcttactgcatcaaggatgttctaaaatgtttgatcactgaactttccagaaatgtgaaaaagactaattggggtaacattactgacatggatactggaggttttcgtgaagagctgaagagattcctaaagctccagaagtgtttgatcgtattggatgatgtttgggcgccagaagtaatcaatgatttgtttggagcacatgttcctaatctcaaagggagcagaatacttgtgacaacacgtatcgatgatgtagctcaacttgctttcccagacaggagaataacattagaacctctatgtgagaaggaatcatgggaactcttctgtagaacagcttttccaagggagacaaatcatgagtgcaatgcagaactgttgcacttgatagatcaaatagttagcaagtgtaagggggttcctctggcaattgtctctattggcaggcttgtctttgtgcgtgacaagaccaaagaggaactgaggagaatacatgaccagctcgactgggagttaataaataatccaagcctggaacatgtcaggaatatcctttacttgagctacatttaccttccaacacagttgaaaagttgtttcctatattgcagcttgtttccggaggatcatcttctcaaaagaaaggcattaatacggtggtggatagcggagggattcatcagtaagaggggtagaagcacaatggaggaagtggctgaagggtatctacaggaattggttaacaggaacatgctacaactaattgacaggaattcatttggcaggataaaatcattccggatgcatgatatcatgcatgagttggcggttgacttgtgccgaagagaatgttttggcgttgcatatgatgaagataatagacgttgggaacatgaggatagagatgaacgccgattggtagtacacaaacttaataaggacattgatcaagaaatttcttgtgcgcatagtcttcgatcagtcattacattggataatagtatgatatcatcatccagcatactatgtctagtagtggacaattgcagatatatgtcaatactggagttaagtgggctacccatcagcacggttccagatgctattggagatctattcaatctccgccatttaggtcttcgtggttcaaatgtgaagtttctcccaaagtctatcgagaagctaaccaacctgttaacactagacctcttcagatctagcatactggagcttcctagaggcattgtcaagctgacaaagcttaggcacttgtttgctgagaaacagactgatcgacatcggcgccttttcaggtggtgcactggtgtaagcatccccaggggccttgagaacttgacaagcctacaatccctacaagcactggaagctcaggatgagtctgttagatgcttaggagagctcaggcagatgagaggtctcagattatggaaagtgaaggcaagcctctgtgaacgcctctatgagtcgctgcttcagatgaaatgtttgtcctacctaagtatcacggcaagtgatgaggatgatgttctccagttggatggcttgaacccccttcctccaagccttcataaactacgtttaagtggacgattggcacacaccatgttgggtgcagagtctcctctattccaagaagatgccgggggacgaaatctgtactcgttgcgcctattttggtcccaactaaaagaggatcccttgccatccctttctcggttgttaaatctaacagagctacatttcaccagagcctacaacggagagaagctggtcttccttactagatggtttcccaagctgaaggttctacgtttaagagacttgcctaatctaaagaggatggatattcagcaaggtgccatggtgagccttgaaagattaagactaataaacctaagcagcatggaagaggtccctctaggcattgagtttctcatgcccctcaaatatctaagcttcgaggagatcactgttgacttcttactgtcattgcgccaatctagaattggtggtatgcgatggtggcacactttacgagaggagaatgatatggaagctggtgtaagaacgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0521600, RefSeq:Os01g0521600

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