Os01g0528300

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Revision as of 04:43, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0528300| Description = Similar to HcrVf3 protein| Version = NM_001049768.1 GI:115437189 GeneID:4323942| Length = 2190 bp| Definition = Ory...")
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Gene Name

Os01g0528300

Description

Similar to HcrVf3 protein

Version

NM_001049768.1 GI:115437189 GeneID:4323942

Length

2190 bp

Definition

Oryza sativa Japonica Group Os01g0528300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:20649630..20651819

Sequence Coding Region

20649797..20650247,20651423..20651763

Expression

GEO Profiles:Os01g0528300

Genome Context

<gbrowseImage1> name=NC_008394:20649630..20651819 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:20649630..20651819 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtatccttcctgtcagattgttgttggcaatgtacgggctccaggtgctcgccgacgacatccaggacgacgccgggaacgtcacgcggttcgtcccgcgaacggacccggccattcaagacgagcatcgtgttcgcgcacgacagggagggcacgtcggtgctgttcaaggtgctgtcggccttcgcgttccgggacatcagcctcaccaagatcgagagccggccacaccgccaccgccatcccatccagttcgtcgacggcgccaacgtgggcacggccaagcacttcgagtacatgttctacatcgacttccaggcgtccatggcggaggtccgcgctgtcggagatacaggagttcacctccttcctccgcgtgctcggcagctaccccatggacatgacgccatggatgatgatcgatcaacaagactgatgctcaaattttatgtcgcaggagccggggaaaagctgcaggccaacatcagaattgcatctgggatgacgaggatattagctatttttttgggaccctggatccaaaggatcaatggtgcagaaggcattccacccacaatgagaatcgcttttagtttctgcagtgagcatatgtggtcaattaaaacttgtgctgacactccgtttctcttgctgggatgcggtgccttcagtcttcggaggcgtctcaaactttctatggctgcgatgcggtgccttcaacttcagtcttcggaggcgtctgaaactctctatgactgggatgcgtgggatgcgttgccttcaatctag</cdnaseq>

Protein Sequence

<aaseq>MVSFLSDCCWQCTGSRCSPTTSRTTPGTSRGSSRERTRPFKTSI VFAHDREGTSVLFKVLSAFAFRDISLTKIESRPHRHRHPIQFVDGANVGTAKHFEYMF YIDFQASMAEVRAVGDTGVHLLPPRARQLPHGHDAMDDDRSTRLMLKFYVAGAGEKLQ ANIRIASGMTRILAIFLGPWIQRINGAEGIPPTMRIAFSFCSEHMWSIKTCADTPFLL LGCGAFSLRRRLKLSMAAMRCLQLQSSEASETLYDWDAWDALPSI</aaseq>

Gene Sequence

<dnaseqindica>168..618#1794..2134#aaagaaaaatggttcgatgtggaaactatctctagttttttctggactgccttgctttggaacatcattagtcgagcaattcttctgaagaggaaagccatagagaccactgtttccattgtagatgtcaggatgttcattatagatgctatcaagttgtgtacctgatggtatccttcctgtcagattgttgttggcaatgtacgggctccaggtgctcgccgacgacatccaggacgacgccgggaacgtcacgcggttcgtcccgcgaacggacccggccattcaagacgagcatcgtgttcgcgcacgacagggagggcacgtcggtgctgttcaaggtgctgtcggccttcgcgttccgggacatcagcctcaccaagatcgagagccggccacaccgccaccgccatcccatccagttcgtcgacggcgccaacgtgggcacggccaagcacttcgagtacatgttctacatcgacttccaggcgtccatggcggaggtccgcgctgtcggagatacaggagttcacctccttcctccgcgtgctcggcagctaccccatggacatgacgccatggatgatgatcgatcaacaagactgatgctcaaattttgtaagttaatttctgctgctttttttcctggcaattttttgtgaccaaatttagagaaaggggatgaagactctcctcctcctcctcctcatgtttacttgcggttgcggatgatgctctgagtaattagtccaagttatatatgctcggtgaggactgaggagtagtagagataccaatatgccatggaggagaggagagccagcaatcccatctccattaccagaaatgaaattttgtgctatgaacgtacattagaaaaatccccgcaaaaaaaaaacgtacattagaaaaaaggaatgaattaggataactgatgatttgctgttgtttgacgttccagccagacataagaaggaaacttgatttttcaaatttggtttagaaacagtccggttgaatatatagtacagtagttcgttgggcaagtgcagcgagagggaagagcggcaagaggccaggccgactccggcttactccactattagcgtaccatactcggactcgtagtcggattcaattctacttccgccggctgcctgcctccatataactcccaagtcccaaccgtcaatcgtctcagctcgtcgcaacaaatcgatctgcagcagagataagagatagagttgttgttttcaggcagctctgcccgtcctcttcttttgcaattacatcttggaaattacgcacagtacctactacaatggctatccaggggcaaattccctttgtccagcgcttggcattcgtgtttcgcagcgtctcaaaatctctggagagattgggtgctgcccctcctaccaaatcattctggaccaggaaccatctcctcaagctacaaaatagccttgacattgcatggcaatcgctctctctaatggaacgcaccttccatcgtcttgaatccaaacaagtggacaaggtcgcatcgcttgctgctgttgctgctgccgcaaccgacgctgcaaatagagatcgccttgaatctaaacaagtggacgaggtttctgctaataaggcttgtgtacatagtgcggttattatcttcttagccgtctctaatgagagagctgcatatggtgccctgtcagcttacaggagttcccttgaaatatgcagggcaaacatgactgtttttaatgacatgcacgtatctgtaaatgacaagctattagatgtcgcaggagccggggaaaagctgcaggccaacatcagaattgcatctgggatgacgaggatattagctatttttttgggaccctggatccaaaggatcaatggtgcagaaggcattccacccacaatgagaatcgcttttagtttctgcagtgagcatatgtggtcaattaaaacttgtgctgacactccgtttctcttgctgggatgcggtgccttcagtcttcggaggcgtctcaaactttctatggctgcgatgcggtgccttcaacttcagtcttcggaggcgtctgaaactctctatgactgggatgcgtgggatgcgttgccttcaatctagagaggcatctgaaactctttgtatgacgaaaagatcataacatgggtcggtacttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0528300, RefSeq:Os01g0528300