Os01g0532200

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Revision as of 04:43, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0532200| Description = FF domain containing protein| Version = NM_001049781.1 GI:115437239 GeneID:4327802| Length = 7437 bp| Definition = ...")
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Gene Name

Os01g0532200

Description

FF domain containing protein

Version

NM_001049781.1 GI:115437239 GeneID:4327802

Length

7437 bp

Definition

Oryza sativa Japonica Group Os01g0532200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:20835155..20842591

Sequence Coding Region

20835706..20835840,20837037..20837363,20837548..20837650,20839587..20839651,20840676..20840783
,20840948..20841040,20841130..20841177,20841536..20841634,20841715..20841831
,20841921..20841974,20842047..20842139,20842230..20842310,20842511..20842528

Expression

GEO Profiles:Os01g0532200

Genome Context

<gbrowseImage1> name=NC_008394:20835155..20842591 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:20835155..20842591 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaactacagaagaaggaaagagccagggctgctgaagagcacaaaaggcacatagcagaatatagagcttttctcgagtcatgtgaattcataaagacaagtacccagtggagaaaagttcaagaacgtcttgaggatgatgaacgctgttcccgacttgaaaagatcgatcgactggagattttccaagagtatataagggatctggagaaagaagaggaagagcacaagcggatacataaggaacaagtaaggaggcaagagcgcaaaaatcgtgatgaatttcgcaagatgttggaagaacatgtagctgaaggaatgcttactgcaaaaactcgttggcgtgattactgtgcccaggttaaagattcctctgtgtacttggctgtggcctcgaacataagtggttcaatgccaaaagatctgtttgaagatgtaatggaggagcttgagaaacagtatcaagatgacaaagcccgaattaaagaagcagtgaagtctggaaagattcctatgacgacttcatggacactagaggatttcgaaactgctgttacggaggatgatactttgaaaggaataacaaacataaacatgaagcttatttttgatgatcaagttgaaaggctcagggaaaaggaggtaaaggaagcaaagaagcgccagcgtctgggtgaaaatttctcagatcttttgtactcaatcaaggaaatatcagcttcttcaacatgggatgattctaaagcactattcgaagatagccaagagtacaaggcattggacagcgaaacatactctagagagcttttcgaagagtgcgttgtccacttgaaagaaaggttaaaagagaaagagcgcttgagggaggaagaaaaggcaagaaaagagaaggaacgtgaagagaaagaacggaggaaagagaaagaaaagaaggagaaagaacgcaaagaaaaagaaagagacaaggagaaagaaagagaaaaggacaaaggaaaggatcggtcgaggaaagatgagatggatattgatgctgttgatgcagatagccatggctcaaaagacaagaaaagagaaaaggacaaggaaaagaagcataagagacaccaccatgacactgcagatgatgtgagctctgaaagggatgagaaggatgactctaaaaagtctcgtagacatagcagtgatcgcaagaaatcaaggaagcatacccatgcttcggactctgatagtgaaaatcggcacaaaagacacaaaaaggatcgagatagctcccgcagaaatggcacacgtgatgaccttgaagatggtgaacttggagaagatggggagattcattag</cdnaseq>

Protein Sequence

<aaseq>MELQKKERARAAEEHKRHIAEYRAFLESCEFIKTSTQWRKVQER LEDDERCSRLEKIDRLEIFQEYIRDLEKEEEEHKRIHKEQVRRQERKNRDEFRKMLEE HVAEGMLTAKTRWRDYCAQVKDSSVYLAVASNISGSMPKDLFEDVMEELEKQYQDDKA RIKEAVKSGKIPMTTSWTLEDFETAVTEDDTLKGITNINMKLIFDDQVERLREKEVKE AKKRQRLGENFSDLLYSIKEISASSTWDDSKALFEDSQEYKALDSETYSRELFEECVV HLKERLKEKERLREEEKARKEKEREEKERRKEKEKKEKERKEKERDKEKEREKDKGKD RSRKDEMDIDAVDADSHGSKDKKREKDKEKKHKRHHHDTADDVSSERDEKDDSKKSRR HSSDRKKSRKHTHASDSDSENRHKRHKKDRDSSRRNGTRDDLEDGELGEDGEIH</aaseq>

Gene Sequence

<dnaseqindica>6752..6886#5229..5555#4942..5044#2941..3005#1809..1916#1552..1644#1415..1462#958..1056#761..877#618..671#453..545#282..362#64..81#gatgaacggtttagtgctgttgagcgtccaagggagcgtgaagacttatttgagagctatcttatggaactacagaagaaggttctgtcttatagaaattctgttccccttttaaattttaattggtgttgggcttatctgtttgtagaatacacttttgggaatcttattctgcaatttcttagtttttttagtatgtctaagaacaaaactagagatttttctggcatgacttgactgtatggatcaagatctaagtatctacgatcatcctgttataggaaagagccagggctgctgaagagcacaaaaggcacatagcagaatatagagcttttctcgagtcatgtgaattcataaaggttgtttcattactactcctattaactgtttagtcaattagtatgcaaacagcttcatcaatgagaaacatatatatttctgtgctgcagacaagtacccagtggagaaaagttcaagaacgtcttgaggatgatgaacgctgttcccgacttgaaaagatcgatcgactggagattttccaagttagtatttttttagatctgcagtgactttctttattttgtgcttcaactatgcatttctgtgcaatccaggagtatataagggatctggagaaagaagaggaagagcacaagcggatacataaggtttttttggtcacataacgttcacttcttttttttttgttcgatgtcttgaaccactatggatgtttaatataagtcaattctgtcaggaacaagtaaggaggcaagagcgcaaaaatcgtgatgaatttcgcaagatgttggaagaacatgtagctgaaggaatgcttactgcaaaaactcgttggcgtgattactgtgcccaggtcattgaaatcgaccttttataaatacgattaaaatgacaacattttttttcttgattcataaaattatcgatttacaggttaaagattcctctgtgtacttggctgtggcctcgaacataagtggttcaatgccaaaagatctgtttgaagatgtaatggaggagcttgagaaacaggttggcctttaaaattcgtagtatactcttgcttatccaatgtattaagtcatcaatgtgctatagttgcctctatgcctgaatttggaattgcaattatcatggcaagtaaaatctgtagtgaatagaggtggccagcaactatggcaaaaacctacatcttggtcctgctgaaagatgttaattctatccattctcatgctttgtaaaacacaataacaaattttatttccatcatgtcacaaaaaagcacgagtctacaatattttcatctcatcacaatcaccatttaaattctggaatatctgttattttttgttatgcatgaacttatgtacctaccatccttttatctcagtatcaagatgacaaagcccgaattaaagaagcagtgaagtctggaaaggtaccttttattttacaagcttgctccataggtaagttttacctgtagaaattagtttgccatctggctgacaaggtaattttgtttagattcctatgacgacttcatggacactagaggatttcgaaactgctgttacggaggatgatactttgaaaggaataacaaacataaacatgaaggtattattgttttgtcaccctgaaaatttgattatgtttgatgaagatgataatatatgtgtattattgatgctgttcttgcggtaacaatttccatgttcagttgtaggactgataagaatttttgtcgatattgttacttatctttgctggatctgctgcagcttatttttgatgatcaagttgaaaggctcagggaaaaggaggtaaaggaagcaaagaagcgccagcgtctgggtgaaaatttctcagatcttttgtactcaatcaaggtatgacactctgtaatttgttgtacatcatgcctattgattgctgattacctacattgaattgtcctgttatgcttatccaaagtccagcaattttcaggacaaagttaacatagcagtgtagaactatttaacagcctggaagacttttgggctgccgacatgatccataaatgccttctattttattcatttatttatacttttgttgcatatatagtactgataaaatcaatttacaatgtagttcctttttaaaaattatatggatgattggtagcatggcaatgaactgtatttggtaactggtaatcaaattcgaagtgtgtagttgaaagatatcatggaaaagtggctgcactttggtactcattgaactaagttgttagttattggtaacattcttttataattcacagatgtggtattatttatgtttttgcatagaaaaatagttgatgagttggaaccataaatactactggtgttgttggagtgcatgaatcatgagcttttatggctcactaaatatgattcttgaaagcttttaggtcagaactaattttgttgatgatttcctatagctgtgacttgcaatggtttgaggaattgataattgaattagggttacccactttatgtacagtaaaattggtctaaaggtgacagcaaggttatctagtatagttctaattgtgtgcaatgtggtcacagaaactggccaaaataaagaagtccatcttgttttacttttgttgcatattgataaatcatggatagacattcatttcaaatcgtaaaggcatacgaatttggcactttgttaaagctttattggaggacattaggagaaatggttgcatgtggaacctacattcatgaatgcactttgctttacaccaggtgcaacagcatgggcaaatagttcagtattatctatagagtcagttagactagtcacgagactacacttttgagattgatcttttttgtactgatgtatatttctttgaaaaaaatgcaggaaatatcagcttcttcaacatgggatgattctaaagcactattcgaagatagccaagagtacaagtaagggcaatcctctgaaaattactgtattgtgacaaatgtttaccatgcctcctggttatactaaactggttggtgtactggctttgccagctggaaggaagttagttccgtaaataggatacttgtgttcaacctggtggtaaataggatacgtgggttcaatcttgcaattttgtggggggaagcaatcagaattggtagatccatgtatttcaaggtgtcgtttagatgacgctgaagccacaaggcaaggcctaagaaacctggtctgcgggacgagcccacattccacgtcgtcgtgacgcatcatagatcgtggatgggtcgttgcctgatcatcgtcccgggcgtcaattggtcgctgcttggtctatgaagtctccatggcgttgcctcagccattagatggggaacaaactgaagaggggaagggagtggacaagagagaaatggatgggggcgtcaattggtcgctgcttggtctatgaagtctccatggcgttgcctcagccattagatggggaacaaactgaagaggggaagggagaggtggagaagagagaaatggatggtgacaggggtgcagtcgatgccctcgaatcgacttgcacgaggggctggtgatagcgttggccgaggcttgcgttgtcttgtcgcccaagaggtggtcgcgcaatgggggcactgatgttggtggctaaggagggcgcaagctgcgggctatgtgggagaagagaacagaggttctcagatatgattaagtggttaacatgttaatgagccacgctagcccatttggcctagttcacaacataaagagatagtgataggagaacgtctggccctcttgtgcaagcagagcatcgctcgagttcattggtcgattccacgccttgtcatgctctgtcttctccaatcttctctcattccgaatgtacatcgtggatgtcgtcccaaaaacatttgttctcgacccgcattcttaaccagcgttccaaaagatggactccattcctcgtgattcaggaacttttgtgactccatcttgtgggcaagggcgttccaaaagatggactccattcctcgtgatccaggaacttttgtggctccatcttgtgggcaaggagtgagggaaatgagagtggaaactcaccctgcgtggtggtgcttccatcctgccatggatctgcacaaaccacattatagcttattgcacaagagggaaggaggggctactctgtatgggagagggaggagtacgtattgcacctctactatgctagggcagctgaggaaaaagaattggtgggctttaaataggctcttccgctgacttaagtgtacgaagctaatgtggtgacttgctgaacgcattgttgacccatatattttctcattttcttgctctcttctttcttttgttgtgtacgttcgcaccctgtgtacacccttctgcctagatcataaagagtgctgggtcgccttgtcgtgatgaatggccatagtaacgatgggtcgaagaaaagtttgcgttgaagtcttgagatgttgtaatcagagtactgtggcacatccattttatatataatttaattcatattgcagaattttaggacctagattctcttgtgctaactgtatgttacattgttactcaatacaatttatagctcacacataaaaaaaatttgtgtccaatgcagtaagtatggcaaatcagttctctataaataatggtttttgtatctgttcacaaacatggcaagcaaggcagtgaattactgaattgcctgaatcagattttaactgagcttcctttgcaaaatacatgttccttgaatgactgaatttgcttgactgttttctgtcatacttttatgttatttatgtcttacctgggttttgaatgattttatactattttttgcattagggcattggacagcgaaacatactctagagagcttttcgaagagtgcgttgtccacttgaaagaaaggttaaaagagaaagagcgcttgagggaggaagaaaaggtaatgtactgatggctgttttatcatatgatatattgtttacctgcatttcttgaaggtgtcagaatgtgtataacatggttgaaacatcgttacttgtatgttgtatcagcagcatctgtttctttgtcaggtgtagcattgacttatgtttttttcgcctgaatttgtatcttctattcaggcaagaaaagagaaggaacgtgaagagaaagaacggaggaaagagaaagaaaagaaggagaaagaacgcaaagaaaaagaaagagacaaggagaaagaaagagaaaaggacaaaggaaaggatcggtcgaggaaagatgagatggatattgatgctgttgatgcagatagccatggctcaaaagacaagaaaagagaaaaggacaaggaaaagaagcataagagacaccaccatgacactgcagatgatgtgagctctgaaagggatgagaaggatgactctaaaaagtctcgtagacatagcagtgatcgcaagaaatcaaggaaggtataacatttgtgctttcgtgcaaatcaagcttctaagtattggcgatttggtgctgatatggcactgtatcatgcatacaggccccggtactaggataataaaaactaccagtttagtgctaaatatatcagcagacattgccaccatcccttgaggagtaccttccaccctcaccaaatattagtgctgatatacgtttaccaacttttattgaactgaaagactgtgctttgcctttgtcttgtgatgttatttggactcattggtggatgattttgtttgtgctaaaatttaagtcgtcttttgtttgtaaaagccatagtggctgtaggacactgcaaacatgtctgtcacagcttttggtgaaccgttacaagctgacattgccatcacttcatgctttctaccaaaaagtaatttggtattttaatactgtaatttttattggtgaaatgggagaattgggtttaggatgttcaagcaaaaagtaacactgccatatataccaccttcgaactaataatattagatgggctgcttactttattagcaatgtcataggatgtccttaaatcttgttaattgatccctactgtgtgaaagcactttgaaatatgaatctattggtataacctttgtacagtatttttcagtaggtaaagaaatgcactttgtattttggccacccccaccccccaaacaaagctgtaaagtttgataagtataaataaaaaataccttatgaatttacttataatttgaccaacttttttttgtcacaatctacaaaatttgactttgtaaatcaactatgccttgtaaatctcttgcataaagtatatgatatttgtattcaaccagaaatcttgtctctagcccttgtaccagcaataatcttgttaaagtgctccctattgtttgaaagcactatgtaatatgaatctattggcatcttgatgaatcttttggtataaccttcttactgcaaatttacttgtaatttgactaactacttttttgggggtcaaaatctacaaagttttgactttctaatcaactataccttatatctctcttgcatgtttgatatttgtattcagcaggaaatcagttttgtaaatcacatggttgtttatctgattgagtaaacttagttagaacatgtaatgattttatgaatgctattaatgcagcatacccatgcttcggactctgatagtgaaaatcggcacaaaagacacaaaaaggatcgagatagctcccgcagaaatggcacacgtgatgaccttgaagatggtgaacttggagaagatggggagattcattagtcattcgtttctccgctgagattgtcagtactactgctccttgccatgttattagttaaataccgttttcttgttttgctcaagtagcgcatctgcttaagaatttggtagtgtcaatcactgttattagtgtacatgctctgagatttacttagtattttatactattttgcagtatcacaatacagtcccccctcctgttttggacatatgaaatggtgcattttgttggcaactataaatgctttcctccagagaaggacaatttctttatggggattatcttcttgtcttgatctggcttgttggaaatggacaataatagccttcattgtttggatgctcacaatgtagtcatgaaggttcttgtactgcaaaacttttgttgcctttagttatcttcttatccccttccctttgtcagtctgggtataggttgtatttgttataggagggggagggctgtaaagtgtttagtggctgaaaaagatcctttagaaggttaggtgcgaaatgcatgcaatgctgaggtttataactgaatttcgttg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0532200, RefSeq:Os01g0532200