Os01g0532600

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Revision as of 04:43, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0532600| Description = Similar to HKT1 (High-affinity potassium uptake transporter)| Version = NM_001049783.1 GI:115437247 GeneID:4327804| ...")
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Gene Name

Os01g0532600

Description

Similar to HKT1 (High-affinity potassium uptake transporter)

Version

NM_001049783.1 GI:115437247 GeneID:4327804

Length

1771 bp

Definition

Oryza sativa Japonica Group Os01g0532600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:20898887..20900657

Sequence Coding Region

20898905..20900007,20900091..20900321,20900423..20900618

Expression

GEO Profiles:Os01g0532600

Genome Context

<gbrowseImage1> name=NC_008394:20898887..20900657 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:20898887..20900657 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctattcggctgcatatctttgtcaattctgcaaggcatgccatcaactcatcggcattcatttgtcggttcatcgcataccatcttagcccgcttttgattcacttatcctattttcttatcattgatatacttggttttgtttccttggtggtgctcaggccaagcaaccacaagtacaatcctcgctatgttgatatgtttttcctatcgacatctgcagttacagtcataggattagccaccatacaaatggaggatctttccagctctcagatagctatcctgactctcttgatgttcttagacagtaagatgttcctttcctttcttggccttgtccttgagtcaagcaagcaaaacaagcatgatcctgaaaaccgtagagtcagttcagttactgtgtgcaagcaatcacagctagaagaggcgactccccaaactccatccatgaactccattgatatcaagaagagatgcctcaaatacttagtgtttgtggtgctggcatacatgatcattattcttgtcactggttctctattggtgttcatgtacatagctcatgtttcaagtgctagagatgtgctaacaaggaaaagcatcaacaaagctctcttctcgatatcggtcacagtctcctcattcacaaatggagggttattgccgacaaatgagagtatggttgtattctcctcaaacaatggcctcctgttgctactcattggccagattcttgcaggcagcacactgttccctgtgtttctgaggttggtgatatgggcattgagaggactaagattagcaaaagctgaagagcctgacttcatgatgaacaacagcagcgcagtaggtttcagtcacctgctgcctaacttgcagacaatatttcttgcagttgtggaggttgcttttgtagccatgacagtcatcctcttctgctgcttgaactgggattctgtagtgtttgcagggctcagctccctccagaagataaccaatgcattgttcatggcagtgaatgcaaggcaggcaggagaaaattccattgattgttcccttgttgcgccagcggctttagtactattcatggtcatgatgtacactccatccttgacaaagttgttctcagcatgtcaagatcacaaacgaatcggcccagaaagcgacgatagaacaagcaaggggaaaccattcctgaagatgatggcattttcaccactcggcttcaacaccacagtgataatgctggtctgcatcactgaaaggagatcactctccactgaccctctcaatttatccacatttaacatcatctttgaggtgataagtgcctacgggaacattgggttgtccactggctacagctgctcgaggcagctgcagcaccaggaggggattgcctgccatgagaaggcgtacaacttctcggggtggtggagtgaaccagggaaactgattcttgttcttgcaatgctctgcgggaggctcaactcaaaggattccacaagcgcacgaactaggtga</cdnaseq>

Protein Sequence

<aaseq>MPIRLHIFVNSARHAINSSAFICRFIAYHLSPLLIHLSYFLIID ILGFVSLVVLRPSNHKYNPRYVDMFFLSTSAVTVIGLATIQMEDLSSSQIAILTLLMF LDSKMFLSFLGLVLESSKQNKHDPENRRVSSVTVCKQSQLEEATPQTPSMNSIDIKKR CLKYLVFVVLAYMIIILVTGSLLVFMYIAHVSSARDVLTRKSINKALFSISVTVSSFT NGGLLPTNESMVVFSSNNGLLLLLIGQILAGSTLFPVFLRLVIWALRGLRLAKAEEPD FMMNNSSAVGFSHLLPNLQTIFLAVVEVAFVAMTVILFCCLNWDSVVFAGLSSLQKIT NALFMAVNARQAGENSIDCSLVAPAALVLFMVMMYTPSLTKLFSACQDHKRIGPESDD RTSKGKPFLKMMAFSPLGFNTTVIMLVCITERRSLSTDPLNLSTFNIIFEVISAYGNI GLSTGYSCSRQLQHQEGIACHEKAYNFSGWWSEPGKLILVLAMLCGRLNSKDSTSART R</aaseq>

Gene Sequence

<dnaseqindica>19..1121#1205..1435#1537..1732#ctctgccctctatctccaatgcctattcggctgcatatctttgtcaattctgcaaggcatgccatcaactcatcggcattcatttgtcggttcatcgcataccatcttagcccgcttttgattcacttatcctattttcttatcattgatatacttggttttgtttccttggtggtgctcaggccaagcaaccacaagtacaatcctcgctatgttgatatgtttttcctatcgacatctgcagttacagtcataggattagccaccatacaaatggaggatctttccagctctcagatagctatcctgactctcttgatgttcttagacagtaagatgttcctttcctttcttggccttgtccttgagtcaagcaagcaaaacaagcatgatcctgaaaaccgtagagtcagttcagttactgtgtgcaagcaatcacagctagaagaggcgactccccaaactccatccatgaactccattgatatcaagaagagatgcctcaaatacttagtgtttgtggtgctggcatacatgatcattattcttgtcactggttctctattggtgttcatgtacatagctcatgtttcaagtgctagagatgtgctaacaaggaaaagcatcaacaaagctctcttctcgatatcggtcacagtctcctcattcacaaatggagggttattgccgacaaatgagagtatggttgtattctcctcaaacaatggcctcctgttgctactcattggccagattcttgcaggcagcacactgttccctgtgtttctgaggttggtgatatgggcattgagaggactaagattagcaaaagctgaagagcctgacttcatgatgaacaacagcagcgcagtaggtttcagtcacctgctgcctaacttgcagacaatatttcttgcagttgtggaggttgcttttgtagccatgacagtcatcctcttctgctgcttgaactgggattctgtagtgtttgcagggctcagctccctccagaagataaccaatgcattgttcatggcagtgaatgcaaggcaggcaggagaaaattccattgattgttcccttgttgcgccagcggctttagtactattcatggtcatgatgtgagttcctctctttcaagttcttcacagtctcaggcaacaatcagaagagataacataacatggttgcttacatttcttaggtacactccatccttgacaaagttgttctcagcatgtcaagatcacaaacgaatcggcccagaaagcgacgatagaacaagcaaggggaaaccattcctgaagatgatggcattttcaccactcggcttcaacaccacagtgataatgctggtctgcatcactgaaaggagatcactctccactgaccctctcaatttatccacatttaacatcatctttgaggtgataaggtaacaaataacacttgcacacacacaattcttctcataatgttcttgctcacctccatgactattttgagttattcatcacccattgcttctgcacacagtgcctacgggaacattgggttgtccactggctacagctgctcgaggcagctgcagcaccaggaggggattgcctgccatgagaaggcgtacaacttctcggggtggtggagtgaaccagggaaactgattcttgttcttgcaatgctctgcgggaggctcaactcaaaggattccacaagcgcacgaactaggtgatgatgatcagaagcgatcagtatgcgatcgatgttctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0532600, RefSeq:Os01g0532600