Os01g0539900

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Revision as of 04:43, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0539900| Description = Conserved hypothetical protein| Version = NM_001049801.2 GI:297596954 GeneID:4326426| Length = 2783 bp| Definition ...")
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Gene Name

Os01g0539900

Description

Conserved hypothetical protein

Version

NM_001049801.2 GI:297596954 GeneID:4326426

Length

2783 bp

Definition

Oryza sativa Japonica Group Os01g0539900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:21502465..21505247

Sequence Coding Region

21503263..21503733

Expression

GEO Profiles:Os01g0539900

Genome Context

<gbrowseImage1> name=NC_008394:21502465..21505247 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:21502465..21505247 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaatagcatcagaaccgtcgctagcctcgatgaggtcaacggtgtcctgcaagagatgggcatcaatgcgattggtcaagcacatcaagttcaattttgcttgcatgagcagacatcccttaaagaagcaacagaaataaaggtgattactcgacctggaaggcatggctttaaattggttaaccctgagttgttgaattgtaagtttaaagccaaggtcaagctagatgtgtgctacaagaccatgttcaacgcatgcatggtgcaatgtgatcaggagctattaccactggaagcccgcattgcgcagctgaagaacctcattctttccacagacgaccagatcccacataggggacccgaagttgatcaaaggaatcgtggagtgcaactcatgctctacccggaaccccccagtatgtttattttcgttttcttcttttattgtgtttttctcatttttttctga</cdnaseq>

Protein Sequence

<aaseq>MNSIRTVASLDEVNGVLQEMGINAIGQAHQVQFCLHEQTSLKEA TEIKVITRPGRHGFKLVNPELLNCKFKAKVKLDVCYKTMFNACMVQCDQELLPLEARI AQLKNLILSTDDQIPHRGPEVDQRNRGVQLMLYPEPPSMFIFVFFFYCVFLIFF</aaseq>

Gene Sequence

<dnaseqindica>1515..1985#gacgccgcctccgccctctctcaaaccctagcatccgcctccgcctccgcctccccctccccgtcgcgagcgcctccgccgccgccaccgccgccgccgcgtcccccgtccccgtccccatccccatcctccgtccaggtcgcgccaccccgtccgccggcgcgtcgtacgcctccaccagctgccggtcctccgcctcccggtcaagatccggcaccgcgccgccttcctccgtcgcctccgcctcccgtctgagatccgcagccccttctctgcacgtcggtttctgcgctgccgccaagaaggtcctcctcctctcttagcacctagggtttcggtatggaagttgttgtgtagataattggtgttgaaatcttgcaattccagatgagatgtatgttcttgcaatgttttcttatttacatgtactggctgcggtttcaattttggtaggaacaccatcttcaagtggttatttagcaaacatttgcttgtggagagccagaaattggccctatttgtgcaactaattcctttcttgtgtaactaaggtttgctttctttgctacaggcatttgtattcctgttcttggtttcggtgcagctgattagattgctctgctaacatctgagtgaaacaaatcttgatcacatgttgaaattgttaatccagctagggattgtttattagtttgccgattcacagtacaaacttggaaagagctattgggattagattagacattgaatataatgtataagcttgtatctctgatcataggattctcttaaataagaataggattctcttaaataagaagtatatccagaggaacgaatattgtttcaaggcattgttattcttgctagtccctctttgtatcaaaagccttctttgccactttcagttttacttctgacactgaatgattttttttaacgaatatcatgttttagattattagttctttgtgatgattatcctgagaagttaactgtaactcattgaattttaggaatctgtaataaagaaaattctgggcataatttgtacttctgcaacttgtaatatgataagttgtatatatcttggattttaaataaacacacatatataatctgaaactgtgttggttgaactagctgctcttctatttgagattaactgaaagctggtggccatcatttgcaatgctgttggccatgtgttgatctgaatttgaggatacaatgatctgatattctgtgaatttgaggatagagtgctgaatatacattttttttcatgccacttaggtagatcgcgcattgtgttttgatttgtggttgttcgtgtagatgtatcacctgtgaaattcttgatttgaaatctgtacttttttctaactaacagttcagttatctgattgtactgaattggattagtctgtcttctactggtttttagctgctataataaatcagtaaaattaaataaattgttgcttatacaggatatcctgtcatccgtcaccatgaatagcatcagaaccgtcgctagcctcgatgaggtcaacggtgtcctgcaagagatgggcatcaatgcgattggtcaagcacatcaagttcaattttgcttgcatgagcagacatcccttaaagaagcaacagaaataaaggtgattactcgacctggaaggcatggctttaaattggttaaccctgagttgttgaattgtaagtttaaagccaaggtcaagctagatgtgtgctacaagaccatgttcaacgcatgcatggtgcaatgtgatcaggagctattaccactggaagcccgcattgcgcagctgaagaacctcattctttccacagacgaccagatcccacataggggacccgaagttgatcaaaggaatcgtggagtgcaactcatgctctacccggaaccccccagtatgtttattttcgttttcttcttttattgtgtttttctcatttttttctgaatatattttttttcttagttcccagacgatcctgattatgagttcggtagtgcaaaccaacgagtcccatatcaagcagcatacgcaaatgatgcacagagaaatgccgcagttgctcgtgacaagcgtgctcagagggcagtttggaatactaatctccgtcttttggaggtgaagaaatccgtcctggagaagaagaagattgaattggagagagttctgagggaagagttcgacaaaatgattgaggagcaatctgacctgggggtcggatatgcgaactaccagtttcctcatctggcataggtaagctgtgctaaaatctgcatacagcttgttaacactagtacggtagtagttttatacacaccttagtaaaatctgtgaaacttgatgtatttgattacaaaatgttacaatgaaattacaaattctacaccttagtgcaatacttcatgccatgcaacattctttctgcctgaaaatttataactggacactaattggattggaataatgcaggttttcaaagagcatgaaacggagaatcttttggaagtgctgaatgctcgttaatggtaggctcaggctgaatgtatcagcatattgtagtagcttatcatgtcactgttttgtctcactgtttgtaatctaagtgagtagtcatatctgttgctgttttaaatctcagatctcagtagatggtgccatctgtgtttggtgctgaagaggaaaaggatattataacaagtatcttgctttctgtttaatgatgcatccggatctgttagttcgttt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0539900, RefSeq:Os01g0539900