Os01g0547400

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Revision as of 04:44, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0547400| Description = Conserved hypothetical protein| Version = NM_001049823.2 GI:297596981 GeneID:4326182| Length = 4381 bp| Definition ...")
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Gene Name

Os01g0547400

Description

Conserved hypothetical protein

Version

NM_001049823.2 GI:297596981 GeneID:4326182

Length

4381 bp

Definition

Oryza sativa Japonica Group Os01g0547400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:22031284..22035664

Sequence Coding Region

22031284..22031523,22034551..22035030,22035126..22035288,22035648..22035664

Expression

GEO Profiles:Os01g0547400

Genome Context

<gbrowseImage1> name=NC_008394:22031284..22035664 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:22031284..22035664 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagctctctgttgcaagcggtgtgcgagcatctcggtgtcgatctctgcgaaggggacgactccccacgccggctcggcaccttctcctcctcgccgactccccacgccgccgcctccacctcctcccctccgctctccttccccaatgccgaccttgtcctccgcctcgacccctgccccgactacgaggtggatttcgacgtcagcgaggatcaccactcctccatcgacctccacgtcctactgataatggaagaagaaggattctatactaatttgatgaatgaggggaacgattccttagattgggatagtttgagtacgatgcctgtggaggatgatatgagtaaccagcttgatgagaatggcatgagtagcgagcctgtcacgcaacagttccccactattgagaggactaccgtggctagaccaaatcaaaaaagatcgaagaattttagtgaacaagaagataagatacttgtgtcggcgtggttgcatgtaagtttggatccagtgctaggcacaaatcaaactcgtgctgcatattggactagaatatacgagcacttatacaaaacaagtaaatccacaccagatcgcagccagaattcacttatgcatcgttggaaaactatacaagagaatgtcaacaagttttgtggatatctgagccagattgagggtagaagacaaagcggggttagtatacacgacaagattgctcaggccattgctgtatttaaggagttggaagataagcccttccaattcctgcactgttggactctcttgaggtcacaatccaagtggcatgataagatgaagcaaataacatcccaaaaaccctgtgccaccaaaaaacagaaggcaagcacagatgggaagccacctcgctga</cdnaseq>

Protein Sequence

<aaseq>MSSLLQAVCEHLGVDLCEGDDSPRRLGTFSSSPTPHAAASTSSP PLSFPNADLVLRLDPCPDYEVDFDVSEDHHSSIDLHVLLIMEEEGFYTNLMNEGNDSL DWDSLSTMPVEDDMSNQLDENGMSSEPVTQQFPTIERTTVARPNQKRSKNFSEQEDKI LVSAWLHVSLDPVLGTNQTRAAYWTRIYEHLYKTSKSTPDRSQNSLMHRWKTIQENVN KFCGYLSQIEGRRQSGVSIHDKIAQAIAVFKELEDKPFQFLHCWTLLRSQSKWHDKMK QITSQKPCATKKQKASTDGKPPR</aaseq>

Gene Sequence

<dnaseqindica>1..240#3268..3747#3843..4005#4365..4381#atgagctctctgttgcaagcggtgtgcgagcatctcggtgtcgatctctgcgaaggggacgactccccacgccggctcggcaccttctcctcctcgccgactccccacgccgccgcctccacctcctcccctccgctctccttccccaatgccgaccttgtcctccgcctcgacccctgccccgactacgaggtggatttcgacgtcagcgaggatcaccactcctccatcgacctccacgtctcctccgcgcccctgcttcactcccactacttcggcgctctcctatctgaccgctggagccctgctcccacctccatcgcgcggagggaggagaggcggcggcagcgaggttgaaggaggcgaggacaggcatgaggcgacaaagaaggggcgtgggaggggacacagtggcagggagggaggagatgaggcggcggctgaggggcgcgaatagaggtggtggcgaggctttctcacctctgctctctctccgctctcgccgagccactccaccgagatcccgccgcctgctctctctcccctcccgccgtcctgctgctcccgccaagctcccgccgctctcaccatctcgctcgccgcaaaggataaagagggaggcgttgggcaactgacacgtgggcccaaaaatagttttatttttattttggtttgttttcattttagtgccacatcgatttcacatgggataagacaccacagaagtcaaaatcgcctccaaaaacaccggtagagttgatttgcaacggttttggaagctaggggatggttatacaggttttgcggttgaggggtgcgatttaaccagcacatgagttgagggagagaaactagacttattccgccttattatagttgtatgggctggcaaactgacagcccacccaacctgaacaggccaggctacccgggtaaaaggactgaaccatctttagttaaatctctataaccgatttcaggatcaaaaatctggccttctattgagccacgtggcacagtaaaaatttggtaagacatcttcaaaaaaactaccacgtgtccatgaagaggagttaaagagcctgcttcgttggaagttatgtctcctgtacacatacatgatacatacacctatcagaaatctctagaaaactcaatacggagtattgccaagtcctcgaagactctccaacggggtaatcactcaatacatagtattgcccagccctcgaagactctccgacggagagattacctagtcgttggagaagatgaagaggccacactcccgtgcacatcatggtaaataagtgtgtacagttcatggcacaaattctatagatttgcaacttttcatatggtaccatgaaaaaatgatgagtattgtagctctttaaacaaaatttagaacacctttaaataaaatatcatcacctttaaataatgtgatttgctacactaaattttaacttaaaaattgattgaaatttttattcgaatgtaccttttttttgtttcaataaaattgaactagattcttataaaactttgcaaaatttatattagctttgtatttaacataatgtcattttaaaaatcaacacagactccattacacatattttatcattgttttcccaaactacatatctatacaaattaaaatacaacaaagttttcatcaaaaatctattgatatgatatttacaatttaatagcttatgatatggaaatttgaggatgtctttttgcaacaaacataatgcttcttaataacacgaaaacaaatgcaagggctataaaggcacgcttgttttctagttttgcttataagggcatctccaagagaatgctaaacaggttactaaaacataaattttaggaatttggtgaaaatcagccctccaacagactcctaaacatggtcccaaaatttagccacctccaaaaccaggaccaacctgaaccaaatattgggcaactagaagcgctcccaatcgaagcaatcgttcctgcccgcgccgttttttcttttcctggcgccaatttttttcctcgcccgcgctttccctcaaccaccgtctcttcgttcgccgggaggagccgcgcctttcttcccctcctcgcgccagcttcctctcctcgcgccaactccgttcagggcgccgccagccgtccgtccgtccgggacgccgcaggttctccaaggcgtcgccggccctccgtccagggcgccgccggcagcccatctaggtcgctgccgcccctccgtccagggcgtcgccggcagcccatctaggtcgctgccgcccctccgtccagagcgctagcggcctccgtccaagtcaccatcgactgtcaatccagggaccgtcggcagtctgtgccccttcgtccacctcgcctctcaacgacgtgagttgctactggatttgtttgaggtaatttcagagtaacaactcatttattttctgcttctctccatggatctaactctctttgtgttcaattgaggttgactcactgatattatccccattgatatcctagtactgacaaggtccttatgtgtatttctttgttttcgttgatacaagtcttagatgaatatgtccaaaatagtcttcacaagttgctaacagaccatattcttctcaccctaaagttctattgaagtccacttaattgtactaaaactattttattcaagaagacaaatgggacatgctagtttcatattctactgaagattttatttctttactggtatagttgaggttttttcccctgaactagtataagttttttttttccctaaactgctatagttaagtttttttttcactgaactgctttgctttgaatgttgtattcataaaagtcagtatcacactgcactgaggcctaatctgaggtatgtttccattgaccagttccatctgttgtgtgtcatatgcttgtgcccacttttacttctatcatgattaaggtcaaaattaaggtcgaaatttttttgaacaatgttagtatattttagatcttcaggtgtggcatgctatctgccatggtgcatgtgcacttaagtcagcacaccacctgaaaggctgctgtctacaaatctaaaatattatatcaaacgaaaaatctgaatagcatctatcatcttgtttttttaggcagacagacaacattgcattgcttagatagacatgtaaacaaaataatcatcttccatttaacatacatgatggagataattgcttgtaggtcctactgataatggaagaagaaggattctatactaatttgatgaatgaggggaacgattccttagattgggatagtttgagtacgatgcctgtggaggatgatatgagtaaccagcttgatgagaatggcatgagtagcgagcctgtcacgcaacagttccccactattgagaggactaccgtggctagaccaaatcaaaaaagatcgaagaattttagtgaacaagaagataagatacttgtgtcggcgtggttgcatgtaagtttggatccagtgctaggcacaaatcaaactcgtgctgcatattggactagaatatacgagcacttatacaaaacaagtaaatccacaccagatcgcagccagaattcacttatgcatcgttggaaaactatacaagagaatgtcaacaagttttgtggatatctgagccagattgagggtagaagacaaagcggggttagtatacacgacaaggtactacatagttatgtagcttgtgtttttatgttagtttataaataaaagatatgatgtttgctaaccacattcacttgacttgacatgtgcagattgctcaggccattgctgtatttaaggagttggaagataagcccttccaattcctgcactgttggactctcttgaggtcacaatccaagtggcatgataagatgaagcaaataacatcccaaaaaccctgtgccaccaaaaaacagaaggcaagcacagatggtttgggaaaagctatacccacaaatgatgatactaccaatcatgttgatgaagataatgaacctacagagaccgaagagccgaagatcaaataccttgctgcatgatcaactgatccatgtgagtgcatattcaatttcagtttgaatgataggttactgaatccatattttcgacagtgatcagtcaaaaaaatcacttgcagtactagctagcttcaattattgtttacagtacaaacatataggtagcttcaaatattgtacattactaattaaaatagactagaaaacttggcagctctatactctgtacatgtattatggttaattcgaactccatcttattgctatcaacagggaagccacctcgctga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0547400, RefSeq:Os01g0547400