Os01g0549700

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Gene Name

Os01g0549700

Description

Similar to RNA helicase (Fragment)

Version

NM_001049832.1 GI:115437443 GeneID:4326192

Length

6227 bp

Definition

Oryza sativa Japonica Group Os01g0549700, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:22197692..22203918

Sequence Coding Region

22197693..22198009,22198115..22198213,22199844..22200018,22200100..22200331,22200478..22200596
,22201215..22201271,22201350..22201534,22202987..22203131,22203198..22203281
,22203369..22203432,22203534..22203544

Expression

GEO Profiles:Os01g0549700

Genome Context

<gbrowseImage1> name=NC_008394:22197692..22203918 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:22197692..22203918 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cacaccccaaattccaaatcgctacctcccccaagaaccctagctccctctccccccctctctctctctctctctctctctctctctctctctctctctctttgcagccgccgccgccgccgccgccgccgccgccgcgtccgcttcgactcccgccgccaggttctctctctccagcgcgcaggcaccatggccgaagccgaggttaaggacaacgaggtttacgaggaggatctcgtcgactacgaggaggaggtggagaacggcaccgacggtggcgccaacgccgccaacgcctccgccgatgtcgtcaagaaggggtacgtggggatccacagctcggggttcagagacttcctgctcaagccggagctgcttcgcgccatccaggactgcgggtttgagcacccttccgaagtgcaacacgaatgcatcccacaagccattcttggaatggatgtcatctgccaagcaaaatctgggatggggaagactgctgtttttgttctctcaagtcttcagcaaattgatcctgttgctggtcaagttggtgcacttgtgctatgtcacacaagggagctagcttaccagatttgccatgaatttgagaggtttagcaagtaccttcctgaggtaaaagttgcggtcttctatggtggtgttcacataaaaaaacacaaggatctgttgaagaatgactgccctcatattgtggttggaacacctggaaggatactagctctagctagagagaaggatctttccttgaagaatgtgaggcatttcattcttgatgaatgtgacaagatgctcgattcacttgacatgcgtagagatgtgcaggagatcttcaaaatgacaccccatgataagcaagtgatgatgttttcagcgacccttagcaaggagatccgcccagtttgcaagaaattcatgcaagatcctatggaaatttatgttgatgatgaggctaaactgacccttcatgggctagttcagcactatattaaactaagtgaggcggagaagaaccggaaattgaatgatctcttagatgcactggacttcaatcaagttgtgatatttgttaaaagtgttagtagagctgcagaactgaacaagctgctttgtgaatgcaactttcctgcgatctccatacattctggaatgacacaggaggagaggcttacccggtacaagaacttcaaggaaggacacaagaggattcttgtggctactgatttagttggcaggggaattgatattgaacgtgtcaacattgtcataaactatgacatgcccgattctgctgattcgtatctacacagggttggaagggctgggcgttttggaaccaaaggacttgcaataacatttgtttcctctgcctctgactctgatgttcttaatcaagtgcaagaaagattcgaggttgacataaaggagcttcctgagcagattgatacttcgacatatatgccttcttaa</cdnaseq>

Protein Sequence

<aaseq>HTPNSKSLPPPRTLAPSPPLSLSLSLSLSLSLSLCSRRRRRRRR RRVRFDSRRQVLSLQRAGTMAEAEVKDNEVYEEDLVDYEEEVENGTDGGANAANASAD VVKKGYVGIHSSGFRDFLLKPELLRAIQDCGFEHPSEVQHECIPQAILGMDVICQAKS GMGKTAVFVLSSLQQIDPVAGQVGALVLCHTRELAYQICHEFERFSKYLPEVKVAVFY GGVHIKKHKDLLKNDCPHIVVGTPGRILALAREKDLSLKNVRHFILDECDKMLDSLDM RRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQH YIKLSEAEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLCECNFPAISIHSGMTQ EERLTRYKNFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADSYLHRVGRAGRF GTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQIDTSTYMPS</aaseq>

Gene Sequence

<dnaseqindica>2..318#424..522#2153..2327#2409..2640#2787..2905#3524..3580#3659..3843#5296..5440#5507..5590#5678..5741#5843..5853#ccacaccccaaattccaaatcgctacctcccccaagaaccctagctccctctccccccctctctctctctctctctctctctctctctctctctctctctctttgcagccgccgccgccgccgccgccgccgccgccgcgtccgcttcgactcccgccgccaggttctctctctccagcgcgcaggcaccatggccgaagccgaggttaaggacaacgaggtttacgaggaggatctcgtcgactacgaggaggaggtggagaacggcaccgacggtggcgccaacgccgccaacgcctccgccgatgtcgtcaagaagtgcgtaccccccaagggtttgctttgttttctctcgctagggttagggtttcgtggttgagtcggttggagggccctgatctgaacttcttctctgttggacagggggtacgtggggatccacagctcggggttcagagacttcctgctcaagccggagctgcttcgcgccatccaggactgcgggtttgagcacccttccgaaggcaagctcatatgctcttttctttttttccccttgttgatgctactgctgctagcgttccatccttttggaggcctttaaattgaaatctaaataaatgatgtgtggagtggcaatcattttattctgaattcgatatagtccgagtagtcacttaaaaaccaacactaacccaggtgtatattaatttggttcaaggactttatagatctataaatgggctaaaactactaggatggcgttatctaagtggtaactgaaaattcgaaagtcacttgtgtcacgtgcgtgcccctctgtttctttcatgttaatttcttattaatcttatttatttcctataatagcttcttacacttatttatttcctgtaataccttaatcaaccttcatgcttgctactgcctcgttacgttatctgaacgagccttcaaattttgagcccatatgatgaataaaaaggcttgattggaattctttaagtagcatagttaactgagttcgaattgttctgaccagacacaatacatagttgacaagcttgactaaactgatggttttactggaaaaaaaagggggaagtagtgcttagattggtctcgctgtgagctaagactgtcaatacatttagacttatttaattggaaaaaacagcatgctgagattggtatcactctggttgtgcactaggatcatccttgcatttagactgcttttggtggggagaagggaaccggtgctaagctgcttgtgcgttaggacggtccatgcatttagaccgcttttgaacttggtggactaggtggttttatggtcaactggtgtcaaaccagcactggttgaactggctgagccagtgattcaccaagaaggaagacccaatgtctcctcaagggctccaacttcattttactgtaaaaaatagtgaaaatagcttgcgggtggaggattcgctctacgacggtggatgccaggtcctgttgccatcccaccacctcgtcatgtgtgtttgtattgaaacatacatgcaacataaactttattgagctgtggaccactggactggtgaaccaagaatttggccgggtcactgaccagttcaacctttcatactatgatactgtactatatttagatgcctcggagtgaatgcaatatataattactgcaaaggcaagcaattggttgtttttaaggtgctattttctccattagctaacatgggcatatgccatatatatttaaactttgaatgcattccctaggcattgatgcacttgcccactccacttttgcagccagctctcctgtttctgggacagttcatctagaagtaactaagtattaactcaaacagaaaacaataaatgaattgattgtgcatgaacatttgctcgtcctagtgcttatttctagtaccaaataagattatatacactctagcattcattatttttccattctttccaagcgtgttaatgaaaacgtcattttgctaatgtgcaggtacaattttatctgacaattttagttgggaggagaatgtggtaaaaactttcaattaacggcgacaggaggttaaatagtttctcactggggtactgctccaattttgtttggctctacaccagtgcaacacgaatgcatcccacaagccattcttggaatggatgtcatctgccaagcaaaatctgggatggggaagactgctgtttttgttctctcaagtcttcagcaaattgatcctgttgctggtcaagttggtgcacttgtgctatgtcacacaagggagctagcttaccaggtatatatttatgtcttagtttaattatgtccaatatgtctgcatatactaactgtctctttacttaatataatgttgtagatttgccatgaatttgagaggtttagcaagtaccttcctgaggtaaaagttgcggtcttctatggtggtgttcacataaaaaaacacaaggatctgttgaagaatgactgccctcatattgtggttggaacacctggaaggatactagctctagctagagagaaggatctttccttgaagaatgtgaggcatttcattcttgatgaatgtgacaagatgctcgattcacttggtaggctgctgttccttgttcaagtgaccatcattctacacccagaatatgtttactttgcgataacttttctacccctatttgtatcatatcaatatatcatacattgctctgttatattcttattaatgcatttgtttcttcagacatgcgtagagatgtgcaggagatcttcaaaatgacaccccatgataagcaagtgatgatgttttcagcgacccttagcaaggagatccgcccagtttgcaagaaattcatgcaagatgtaatgtcatgtggcctatctcatttcaatagcgcttcttcttactctggcatactaccatgatatgagtggtggcagttctgttgtcagtagatcaaagggatttctgatttttgtacacttctccattggtcgtagttcatcaattactacctgagtgttcctattggctgcaagtgaagtcttctgtcaatgtgaaccatctggggagaatgcgggtgttggggttgggagggcaccgttattgtagattgtacaaggccagtgcggcttttctccaattgtctgcatgcttgaactggactccgctttatcagagtaaactgcttctgtttctcctacccttctcatggtcagtgtggacaaagcagcttcctcttgatgctagttcttgtagcaagcactgccccagaacttcttctctatgatttggtcaaatgtcagtgtccattgtcatagctgaagttcaaataccagtgcccaattcatagctgaagttcccttaggaggctcaaaattttgatgcaagaagaattgatatgctattcttattggtgtggctagaacattggcacacagaaattctaatacctttatctaccatttgttatcttacagcctatggaaatttatgttgatgatgaggctaaactgacccttcatgggctagttcaggtactatttaattatcaatttgtcatttgaaccacttttctgtttattttgtaccaaccccccgttttctgattccagcactatattaaactaagtgaggcggagaagaaccggaaattgaatgatctcttagatgcactggacttcaatcaagttgtgatatttgttaaaagtgttagtagagctgcagaactgaacaagctgctttgtgaatgcaactttcctgcgatctccatacattctggaatgacacaggaggagaggtttgttctcttgaattccttcgtggcctggtcttttaggttcttgtgttttgtgcttgttttatctgttattaaaataacaataatctatgctgatggtggtggttgtcttattttatttatctttttctttgttgtcatgctttagatgatgtcagatatttcatcaacctaattcaaatctatatttctaaagctggcgggtctctcggccagctgattggtcgagctggtggctctatattttgttgacacgtgtaaagcaaccggcgaacactcgcgtacatccagagtcggaactcgagagagatcaggagaggggaaaaaatcgaagctagtgagccacatacgcacatacacctgggcctagcgccacatacgcctgttccagtttgctcaatggtgctacaagcttacgcctgtcctcgcctcctcgtgtttgtcaacctgtcagcctgagggtgtacagtagtagaaactagcaagcaaacatggttgactcaggttctaatgctttgtcttagcccaacaacaatcaatccatctatccttagctaaaagtatgtggtaaaacttgattatattggaccaaataaccatcaggcccaactttactgaaatgaaaataaacaagtcatttatatacctcacaagtaaaaaaattttaaatgcaattctgagcattaaaatcacatttataactaattcgttatacaagtacttcgtttcaattaaagtataacatattcaaatatatcttcacaaaaaaatatcgtagtttaatttgaggttttttggaataatatgatttgcttcacaataaaacgaagctgaaaattcatcagaaagtttttatcataatctatattgaaaataacacataaatagtataacatgggctataaagtaaacgcgcgaatcggcgtgttaatttcctagtgtattctataatctgtacatttttctggtgcctataattgctttgtgggtcaaccatagtgcattatccatgtgagtgttatgatgtaagcatggatggagttgacctattatttcatacgttcgtatttactttatattatttcaatagttatgcctaataaagttagcatatctttgagacattaaggaaacttgttgaaattaacagcatgccacgaagcaggattcacctgtgtttggtttatgccctcaattgttgttctctagaccttttatactattattatatgaatacttttgttggtggtgatggtctgcctgccaacctaccctcagccaccactttattgctggcaatgaaatagacatgatcagggtttcagatcataccactatagccattaaatgattgaggagttctgatagttattccctgaccagttgtggcggtttgatccctgccaagaatccttaatgtttgatccttatctaatgatggagcttttacaggcttacccggtacaagaacttcaaggaaggacacaagaggattcttgtggctactgatttagttggcaggggaattgatattgaacgtgtcaacattgtcataaactatgacatgcccgattctgctgattcgtatctacacagggtaattttaacatcacttcactgcttctctttaagttctttctcttgctgacattctatcctccaggttggaagggctgggcgttttggaaccaaaggacttgcaataacatttgtttcctctgcctctgactctgatgttcttaatcaagttagtacaactgatcattttaattttgttgcttaactggtgtgatgacaaagcctcactgtaatttctcatgcatgatgttttaaggtgcaagaaagattcgaggttgacataaaggagcttcctgagcagattgatacttcgacatatagtaagtgttgtttaccttgttattccagattaatttgtaataccatatcatatgatttgttcaaagaactgatttgttgtattttgatttgtattttccagtgccttcttaaagatccgggtggattgcttaaagcttacattcgaacggaaacgagagtatctccttgagatacggcatattaagaatctatcggataactaaaaacttagtgtgagaaatgctgccctatctatacttagacagcagtttagatctgctgctaagtgctgaatgccccgtaataatacttgaaatgatgtatctgggcaattgggcatgtacgtatttgaattgcagtcgttcattgtaattccgagaattttattaggatttgtttgtgttaattttgctactccgcagatgctaacgtgggttagtttatagtactttgtttatggtacttttgaggatttcaaccgcgtttcttaccgtacattttgttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0549700, RefSeq:Os01g0549700

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os01g0549700&oldid=26022"