Os01g0550300

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Revision as of 04:44, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0550300| Description = Similar to Gda-1 protein| Version = NM_001049836.1 GI:115437461 GeneID:4326196| Length = 2814 bp| Definition = Oryz...")
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Gene Name

Os01g0550300

Description

Similar to Gda-1 protein

Version

NM_001049836.1 GI:115437461 GeneID:4326196

Length

2814 bp

Definition

Oryza sativa Japonica Group Os01g0550300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:22256290..22259103

Sequence Coding Region

22256654..22256698,22256846..22256956,22257636..22257719,22258085..22258185,22258319..22258777
,22258850..22259036

Expression

GEO Profiles:Os01g0550300

Genome Context

<gbrowseImage1> name=NC_008394:22256290..22259103 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:22256290..22259103 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagggatacgaccgcgagttctaccagttcagcgaccagctgcggctgcagacggcgagcttctccggcctctccctcggcgactccatctggtcctccccctccgaccgccgcaacgagccggccttcgacggcgagtaccaccacttctcctccccctcccccgccaagaacgccatcgccaccaaggccgaccgctacaacagcgtcaacctccccgtcgacaacaacaacaacaacaagtcctacggcggcgccgccaagatcaacaacaacaacgtcaacgccttcgggttcaacaagatggggggttacaacaacagcagcaacggcggcggcaactacggcggcaacggcggcgacgtgaagagctacttcaacaagtcggtcgggaggccggcgagcaacaacaacaacaacaatagtaacggcggtggcgggtactacggcaagaagggcggcgacggcgccggcgggaagaagaagcacgccaagaacagcgacagcggcgcgcaggcgtcggacaagaggttcaagacgctgccggcgtcggaggcgctcccccgggacgaggccatcggcggctacatcttcgtctgcaacaacgacaccatggaggaaaacctcaagaggcagctcttcgggcttccatcgagatacagggattcagtgagggcgatcaggccagggctgcccctcttcctctacaactactccacccaccagctccacggcatcttcgaggctgcgagctttggcggaacaaacatcgatccgacggcgtgggaggacaagaagtgccccggcgagtcgcgcttccctgcacaggtgaaggttgcgacgaggaagatctatgacccgctggaggaggacgccttccggccgatcctccaccactacgacggccccaagttcaggctggagctcagcgtcgccgaggcgctctcccttcttgacatctttgcagacaaggatgacgcctga</cdnaseq>

Protein Sequence

<aaseq>MEGYDREFYQFSDQLRLQTASFSGLSLGDSIWSSPSDRRNEPAF DGEYHHFSSPSPAKNAIATKADRYNSVNLPVDNNNNNKSYGGAAKINNNNVNAFGFNK MGGYNNSSNGGGNYGGNGGDVKSYFNKSVGRPASNNNNNNSNGGGGYYGKKGGDGAGG KKKHAKNSDSGAQASDKRFKTLPASEALPRDEAIGGYIFVCNNDTMEENLKRQLFGLP SRYRDSVRAIRPGLPLFLYNYSTHQLHGIFEAASFGGTNIDPTAWEDKKCPGESRFPA QVKVATRKIYDPLEEDAFRPILHHYDGPKFRLELSVAEALSLLDIFADKDDA</aaseq>

Gene Sequence

<dnaseqindica>2406..2450#2148..2258#1385..1468#919..1019#327..785#68..254#attccgcgccccctagccaagcagcacgagcacacgagaaaacaagagaaaaaaagcagcagcggccatggagggatacgaccgcgagttctaccagttcagcgaccagctgcggctgcagacggcgagcttctccggcctctccctcggcgactccatctggtcctccccctccgaccgccgcaacgagccggccttcgacggcgagtaccaccacttctcctccccctcccccgccaagaacgccatcgccaacatcaacggcgtcgccggaaacctggatggcccgggcctcatcggctccggcaagctcgccttcggcgccaccaaggccgaccgctacaacagcgtcaacctccccgtcgacaacaacaacaacaacaagtcctacggcggcgccgccaagatcaacaacaacaacgtcaacgccttcgggttcaacaagatggggggttacaacaacagcagcaacggcggcggcaactacggcggcaacggcggcgacgtgaagagctacttcaacaagtcggtcgggaggccggcgagcaacaacaacaacaacaatagtaacggcggtggcgggtactacggcaagaagggcggcgacggcgccggcgggaagaagaagcacgccaagaacagcgacagcggcgcgcaggcgtcggacaagaggttcaagacgctgccggcgtcggaggcgctcccccgggacgaggccatcggcggctacatcttcgtctgcaacaacgacaccatggaggaaaacctcaagaggcagctcttcggtaagcataaccaacctataaattcgatgataaaaccatccaagaattggtacttgaaccctaattattcttgaaccaagaaattatgtcccataaaattaagtttctcatgaacaaatcgtgcttgatgcagggcttccatcgagatacagggattcagtgagggcgatcaggccagggctgcccctcttcctctacaactactccacccaccagctccacggcatcttcgaggtaataattttgggtgtagctatatctatgacgccatatttttcactaaaaaatagtcgacatgtatttacattctaatttcctaaagtacatatgtgatttttagtgtatttacaatgtaagtcttaaaattacatatgtaagtactaaaattatatatgtaaattcgaaaattacatactaattacatatgtaagtggggtgtaaatgaggtgtaactactatgtaagtggctgaaaaaaaatcgactgtagtatatggcgccatatttctagcaactctgataatttttactactcgctaattacgagtttattattttgtgaattattgcctaattacatacttatttctttttcattcaggctgcgagctttggcggaacaaacatcgatccgacggcgtgggaggacaagaagtgccccggcgagtcgcgcttccctgcacaggtaccattgatcttcaacttcccatgaatcagattgttttcgctcaaatttctgcacttccacatgttttaatatgtaattaagtgtatttaggaattagttctactagatttaattaagttgtgctaccaccatagtctagaatcaatcaatatgagttatgaagatggggacgtgatatgcatcagttgcaaggtttgatggggggaagaagaattggtccttgcaaagtagaaatggttaatcaataataaaataaataaacaaataaatgccggtctagatcgtcggcaaagatcgctagcgactgcctaaccaccgcacctaagaaaggttggatggacagtaagagaccgacaacacgaccacatcagacaacagagtaatcacaaacactaaaagccttctcggttggttgcttccgtgtcgtctcatagtgcgatggatcatgggatggatgcaaatttccaccactgtcgcaatcaattcacaccaaaggctaaacccaaagtgaaagtggagagtgatctcacaaggatccgaccatccttgggaactttagtttagactgaatcatcaaacctacctatctgaagctggttaccaacctcataaacttgatttggatggatgaccctatgtccttaatctgtttccttttcttgtttgatgccatcaggtgaaggttgcgacgaggaagatctatgacccgctggaggaggacgccttccggccgatcctccaccactacgacggccccaagttcaggctggagctcagcgtcgccgaggtaacttttgttcatccaaacacacagcaaaagacaacaattccttgaagaattcactgcaaattaacatacagtgagatcatgagacaccatgaagtatgaatgatgccagcaagctgagattttcgttgccgtgtgttgttgcaggcgctctcccttcttgacatctttgcagacaaggatgacgcctgaggctactgcttccctgctgctgcttgctgaagaatatcaggggactgccggtgaaggacacaagtaataaagattcgacgtgtatccgttgtgagatatacatacataaatacataaatacaagtagtaagtaattaacggtgtgtgctgatgaatttggaacgattagtacaatttctgagggggtttcccatctcgcgggctaagagatgatgcgtcccattgtattttttttaatcatgtgcgatgatgatgacttcagtctgcagaggattagcccctttgttgttgtaatatttatacacacgttatttgcttctggacggccagccatgtataatactttgagacctctttctgtttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0550300, RefSeq:Os01g0550300