Os01g0556400

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Revision as of 04:44, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0556400| Description = Heat shock protein DnaJ family protein| Version = NM_001049859.2 GI:297597011 GeneID:4324566| Length = 4529 bp| Def...")
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Gene Name

Os01g0556400

Description

Heat shock protein DnaJ family protein

Version

NM_001049859.2 GI:297597011 GeneID:4324566

Length

4529 bp

Definition

Oryza sativa Japonica Group Os01g0556400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:22644692..22649220

Sequence Coding Region

22645071..22646213

Expression

GEO Profiles:Os01g0556400

Genome Context

<gbrowseImage1> name=NC_008394:22644692..22649220 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:22644692..22649220 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagggcaacaaggacgacgcggtcaagtgcctccgcatcgggaaggccgcggcggacgccggcgacagcgcccgcgccgtcaagttcctctccaaggccaagcgcctcgacccctccctccccatcgaccacctgctcgatcctctcctcaaccaggacgacccgccctcgtcctccgcctcgtcgtcgtccccacaggccccgccgccgccgccacctcggtcgtcagcagcggcagcatccgcggaggaagcaaccgggagcgatggtctgagagagaggaagcagaagggtaagaagaaggaggaggacgagagcgccggtgagaggtcatacacgtctgagcagctggaggttgtgcgccaggtcaagaagcacaccagggactactaccagatcctcggcctcgagaaggactgcactgtggaggacgtgcgcaaggcctaccgcaagctctccctcaaggtgcatcccgacaagaacaaggcccccggtgccgaggatgcgttcaaggccgtctccaaggccttccagtgcctcagcgatgccgagagccgcaagcgctatgaccttgttggctcggacgagccggtgacttacaacaggagggctgcctccactgcccgtgcgtataatgggttttatgaggatgaatttgatccggatgagatattcagaaacttcttctttggcgggatggcgcctgccaccaccagacagtttgggcagtttgggacgtttcatttcaggactggcggcatgcaccatggccatggggcgcaaaattccggtggctccactctccggatgcttattcagctgttgcctgttctattgctgctgttgctcaacttcctgccatcttctgaaccggtctactcgctgtcccgctcttacccttatgagcacaaattccaaaccacacgtggagtcacatactatgtcaagttgcctaactttgaggagcagtatccacaccagagcactgagcgtgcaacactcgaacggcatgttgagcgggattacttctcaatactctcacagaattgtagggttgaggtgcagcgtcgccactgggggctttcctacgagacgccgcactgcgacatgctccggaaatttgaggcaacagcacagtaa</cdnaseq>

Protein Sequence

<aaseq>MEGNKDDAVKCLRIGKAAADAGDSARAVKFLSKAKRLDPSLPID HLLDPLLNQDDPPSSSASSSSPQAPPPPPPRSSAAAASAEEATGSDGLRERKQKGKKK EEDESAGERSYTSEQLEVVRQVKKHTRDYYQILGLEKDCTVEDVRKAYRKLSLKVHPD KNKAPGAEDAFKAVSKAFQCLSDAESRKRYDLVGSDEPVTYNRRAASTARAYNGFYED EFDPDEIFRNFFFGGMAPATTRQFGQFGTFHFRTGGMHHGHGAQNSGGSTLRMLIQLL PVLLLLLLNFLPSSEPVYSLSRSYPYEHKFQTTRGVTYYVKLPNFEEQYPHQSTERAT LERHVERDYFSILSQNCRVEVQRRHWGLSYETPHCDMLRKFEATAQ</aaseq>

Gene Sequence

<dnaseqindica>380..1522#atatcgactccgcccgcggtggtcgtcgcgtcgccgtctcatcacatctcccccccctcctctcttcttcctcccctcccacggcgactcgccgccgccgccgacgccgacgccgatccggtctccgctccaactccggcgaggtaagcatctcccaacacggtcgcgcctcccaatcatccgatgcggccgatttccacggctcgttcggaaatcggaatctgattccccccaccttgttgtgcgaatcgatcgcttctcagattggatttgggggcggagccgatccgatcggggtccatcgcacggaggaggaggaggagggggtgactcgccgtcgcgcggccagatctgcggcggctgcgcggggggaggcgccatggagggcaacaaggacgacgcggtcaagtgcctccgcatcgggaaggccgcggcggacgccggcgacagcgcccgcgccgtcaagttcctctccaaggccaagcgcctcgacccctccctccccatcgaccacctgctcgatcctctcctcaaccaggacgacccgccctcgtcctccgcctcgtcgtcgtccccacaggccccgccgccgccgccacctcggtcgtcagcagcggcagcatccgcggaggaagcaaccgggagcgatggtctgagagagaggaagcagaagggtaagaagaaggaggaggacgagagcgccggtgagaggtcatacacgtctgagcagctggaggttgtgcgccaggtcaagaagcacaccagggactactaccagatcctcggcctcgagaaggactgcactgtggaggacgtgcgcaaggcctaccgcaagctctccctcaaggtgcatcccgacaagaacaaggcccccggtgccgaggatgcgttcaaggccgtctccaaggccttccagtgcctcagcgatgccgagagccgcaagcgctatgaccttgttggctcggacgagccggtgacttacaacaggagggctgcctccactgcccgtgcgtataatgggttttatgaggatgaatttgatccggatgagatattcagaaacttcttctttggcgggatggcgcctgccaccaccagacagtttgggcagtttgggacgtttcatttcaggactggcggcatgcaccatggccatggggcgcaaaattccggtggctccactctccggatgcttattcagctgttgcctgttctattgctgctgttgctcaacttcctgccatcttctgaaccggtctactcgctgtcccgctcttacccttatgagcacaaattccaaaccacacgtggagtcacatactatgtcaagttgcctaactttgaggagcagtatccacaccagagcactgagcgtgcaacactcgaacggcatgttgagcgggattacttctcaatactctcacagaattgtagggttgaggtgcagcgtcgccactgggggctttcctacgagacgccgcactgcgacatgctccggaaatttgaggcaacagcacagtaatatgtccagaggagctaggtgcgattcaactttctgtgcacatagtttttctgtagcaatatacacgcattatttatttatttagtgatttgcaaccttttttgccctgtgtcatgagtttctttactttcttatgcaaccgtgcttttaagttttatatcctacttttgtttaactcttattacgctttaggagctatgtatgtcaagcaagctaagcgctccactagaatattggtctattttgttatgctgcgtaaacattgtttgatgaatggcgcaccagaagtaaaacatcccattatttgtagttatgctacgcaatgagattattgagttgatacctaaacattgtttcgacgaatggtgcaccatgcaagacttttttttttcccttctggactgggaccatcttaatatcagttgccgttgtggctggtaaaccaattttccaaggggagatttgctcttctgtcccacaataagttgatggcatttgctcttttgccccatatgtgtgtatgacatgtggtccctagttctggttgtcattcactgggaatgtggaaactggcaaatgagcaaacactaaactatggggcaaaagaactattttacctttttggggagatttgcatgctggacacactaattatatttggtgccaagcacgcacaatgatgttggacataccagttggctgcagaatgagtaataacaactcttttacaattagcagcttccagtttgtgtagaataaacagaaccaaagttatcctactttattctaatgatctgatcatgaaattttttgctgttacaccgacatctttatcaacagtcatcctgtttgtttgtattttcaaggatgaagttttcatggcattctatgctgagtctcattgataatatctggtattgattactgattttgaagaaacaccgttgttctccagagtcttctgtaatattcatggctagatcaatcaaacatttttgttttttttcttgaaatcctttgcttggtttatacaattaccatatggagtttgagttgtctacttgtcttgccttctcacctgaatttcgtactgagagtttatgtatcgatgccttaccaattcaaaccaataacccaaatatggcaatgataaagccttggcaagtaagtcttttgtatttcatctgtaatttaacttgtcgtcatatgattaggcaagtagatatttcatatttgataaaaattgctccagtggttgctattggtgccattgtcttaagagaacctaaataactcaatttgtaggaaggttgttttctatcttgttcacttcttgtacccgcatttaactctctgtcgagtttaattagtgaactaaggaattgtattttctcaagggaacttttgacctcttggttagtcatgctggaaatcacaatggtatgctgtagtatctagcaatttttttccacttaacatcacgagacttgactgaatgccaccctcttcatttcctatcagattaatgaaattctagagtacagtagtttgaaatatgaaaaattgttcatacattctaaggtatgggctgacaggttctggttcattggttgtcagtaactacgtaatatgatgtttactgttgtgcactttccacttggttgatcttagctatgtaatatgaagatctatatggttctttggcactcctagacctagaatggggttatcagaggagttctatcaggcagtttatcttgtgcctatcaaattgcacaacaaatgagcaactccgatgctaaaatagtgggcatatcgtttgtaagtttaatttagtttgaaagcatcttgcaacattacagcttgaaattagttatcattgattcccatgtactccattttcttagtccatacttattgctatttgttattttcttttctttatgcggatgttgattgtttcatgcttgaatatttgatgtttgatcatgaacttaagctgtagtacagaattttcatagagaaatgcgctcgtattttgatggtatatagtgatgagggcagttgatgtatgttgaattcattcatagtttgtacagatgtagaacaaaagtgctcaacattgctctaccctgatccttacccgttgtcagttggatatgcatcaaataggccaaacaaagcaggattcctcatgcttcatctgttctaaactcatcaattgttaccatctgacttagatcttcccttcagctcatgctctttttgaaccattgtttactgttatgtcccaataatttggtggcaatgaccatagttgacactcactagtcagtcttaagcatgtacatgcatcgcacgtggtgttaataaggtggtaaatggaaatggaaattgaagtgaataaaatggtaattgctaattactatgttatccacttaagccatccggaaactatcactaattttgttctgtttcttgaatatccttacagattggaaaaaagtggggaggtggggaatactttatagttttcgcatagttttattatatggtacagtatatataaatatactactgtgccttttaactaatctcgcaacattattggccattaattgattgtgttaaatccttttgacacttgttgtacattggcaggcacacaagaactttggccatggtgtaaaggtttccaacgcttgctcctttgataggcttcaaattggaggggacaaattagttttgactcgtggtaaattttgtggaataagtgccttcgatgactacacactctgccttgatactttcctgatagtgttgaggcgcctcaaacggtagctacttaaatggatatgtaattcatcaagttccataggggattgatcaatatgcaatcatgtgtatgtatacgaagcatatctatgtcgtttttatctcaagttttcggagaatacctgacttaacagacatcatagttgacaatgaaaaaaatgggtctgcaact</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0556400, RefSeq:Os01g0556400