Os01g0568400

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Revision as of 04:45, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0568400| Description = Protein of unknown function DUF26 domain containing protein| Version = NM_001185497.1 GI:297720128 GeneID:9268183| L...")
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Gene Name

Os01g0568400

Description

Protein of unknown function DUF26 domain containing protein

Version

NM_001185497.1 GI:297720128 GeneID:9268183

Length

10459 bp

Definition

Oryza sativa Japonica Group Os01g0568400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:23494471..23504929

Sequence Coding Region

23494471..23494770,23495241..23495397,23495569..23495815,23496159..23496372,23497300..23497463
,23497578..23497685,23502331..23502590,23504349..23504929

Expression

GEO Profiles:Os01g0568400

Genome Context

<gbrowseImage1> name=NC_008394:23494471..23504929 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:23494471..23504929 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaacccctcctcctcctcttcctctctccggtggtcgtcctctcgtcgtcggcatggacggcccgtggtgaagatgaggcggtggcagtggcctcgccggaggtgaacccgctatactacaactgcagcctgtccggtggccgctacggtcaaaacaccacgtacgaggacaacctcaaggcgctggccgcgcggctcgtcggtgtggccagggtctccaacttcgcctcgcacaccgtcggcagcgcgccggacgcggcgtacggcatcgcgctctgccgcggcgactacaccggcgacgagtgcgccaacggcctccgcaaggcgttcgagaatgccgtcgagaaccgcctcttctgcgacaggttcagggacgccacgatctactacgaccagtacatgctccggttctccggcgaggacttccgggccaacctaacgaacgcgccggcgtgggtcgcgtggaacatgaacaacgtgaccggcgccggtggcgccgccaagttcggcggccgcgtcatggagctgatcaacaagaccgctgactacgcggcgtggcactcctccctgcagcgcggcgtcggcatggtggagcagcagtgcagcagtagccccgtcatgtacgcgctggtgcagtgcacgcctgacctcttgccggccgactgccggagctgcctggccggcatcgcctcgcagatgcccaggtggttcagtagcaacaccagttaccgcctcggcgggaggattctcggtgtccggtgcaacctgaggtacgaggtcgatcgcttcttcctagaaagcaacgagaccatcaagattcatatgccaaaaccgaaaggttcattgagcgcagggaagatcgtcggaatcgtccttggagtagtagccttcgttattctaattttctccttgattatacttgcattgctcaaaagactaagagaagtaattcaagagtcagaacggcaaaagaaactagcaaaacttgagactgagatcatagacgagattggaccgctcttttcacgctatactttacaacagataaaagaagctacacgtgatttctcaaatgaaatcggaaaaggaggttttggccatgtttacaagggtaaactaccaagcggaactgatgtagcagtaaaaagactcgcggtatcttcatctggccaaggttttgaccaatttatgaacgagattaaacttatggcaactcttcaacacaggaacctagttaggcttctaggtttctgcatccaaaacgaagaaaacatactcatctatgagtacatggagaacggaagcttggatgatgtgttttctgatcccgaaagaaaatcccggctgctagattggtctacacgcctccgtgtaattgatagcatagcccaggggcttctctacctccacagattagcaaaacagaatacatgcatcgttcatagagacattaaggtcaacaacattctgctcgatgcttcaatgaatgcaaaaatctcagatttcggaatcgctaagatattctgcccaaatcttatggagtcagcaacaaccaaaggatgcggatcatttggctacattgcacctgaggtgttacttaccggcaccttctccgataagtctgatgtgtatagccttggcgtgcttatcttggaaatcataagtgggacaaaggtgaactctgcctgcttctttcaacaaggaagatcagacaacctgttgacctgtgcatggcaactgtgggatgcgcaaagatacaaggaccttgtggaccgctcgttaatatcagcaggagaaaacattgaggacgctgtgttaatcaggtacgtccagatggcccttctctgcgtgcaggccaaccccgagcatcggccgaacatagacaagatcgtcgcgatgctgagcaacacggaggccctggacgtccctaaggaacccccggcatattacaacgtacaagttcccacatcaagtaatcatagtggcgctgtcacccccacgatgttctacactagtatttctagctag</cdnaseq>

Protein Sequence

<aaseq>MQPLLLLFLSPVVVLSSSAWTARGEDEAVAVASPEVNPLYYNCS LSGGRYGQNTTYEDNLKALAARLVGVARVSNFASHTVGSAPDAAYGIALCRGDYTGDE CANGLRKAFENAVENRLFCDRFRDATIYYDQYMLRFSGEDFRANLTNAPAWVAWNMNN VTGAGGAAKFGGRVMELINKTADYAAWHSSLQRGVGMVEQQCSSSPVMYALVQCTPDL LPADCRSCLAGIASQMPRWFSSNTSYRLGGRILGVRCNLRYEVDRFFLESNETIKIHM PKPKGSLSAGKIVGIVLGVVAFVILIFSLIILALLKRLREVIQESERQKKLAKLETEI IDEIGPLFSRYTLQQIKEATRDFSNEIGKGGFGHVYKGKLPSGTDVAVKRLAVSSSGQ GFDQFMNEIKLMATLQHRNLVRLLGFCIQNEENILIYEYMENGSLDDVFSDPERKSRL LDWSTRLRVIDSIAQGLLYLHRLAKQNTCIVHRDIKVNNILLDASMNAKISDFGIAKI FCPNLMESATTKGCGSFGYIAPEVLLTGTFSDKSDVYSLGVLILEIISGTKVNSACFF QQGRSDNLLTCAWQLWDAQRYKDLVDRSLISAGENIEDAVLIRYVQMALLCVQANPEH RPNIDKIVAMLSNTEALDVPKEPPAYYNVQVPTSSNHSGAVTPTMFYTSISS</aaseq>

Gene Sequence

<dnaseqindica>10160..10459#9533..9689#9115..9361#8558..8771#7467..7630#7245..7352#2340..2599#1..581#atgcaacccctcctcctcctcttcctctctccggtggtcgtcctctcgtcgtcggcatggacggcccgtggtgaagatgaggcggtggcagtggcctcgccggaggtgaacccgctatactacaactgcagcctgtccggtggccgctacggtcaaaacaccacgtacgaggacaacctcaaggcgctggccgcgcggctcgtcggtgtggccagggtctccaacttcgcctcgcacaccgtcggcagcgcgccggacgcggcgtacggcatcgcgctctgccgcggcgactacaccggcgacgagtgcgccaacggcctccgcaaggcgttcgagaatgccgtcgagaaccgcctcttctgcgacaggttcagggacgccacgatctactacgaccagtacatgctccggttctccggcgaggacttccgggccaacctaacgaacgcgccggcgtgggtcgcgtggaacatgaacaacgtgaccggcgccggtggcgccgccaagttcggcggccgcgtcatggagctgatcaacaagaccgctgactacgcggcgtggcactcctccctgcagcgcgggtactgttgaatttataagcatataataatttaatttattccataaataaatcatgatattgtagatgtaaactagtataaatccatcattagatctacatatgtatactaggcagtaaagcatcaacagatcaaatatgcgtaatatattgaacacgtatcgagggtaccggaagactagttgctcagcaggaattactcacggttgcaggcgttgacgacggcgcgtagcacgtgagcaaagaggaagatgagtcgtcgtgaacgaacagggagtattcgtgcgaagcgcttcccaaaaaacttattgccgccttctccttgtgcaggatgtcgaaggtagagggtctcggcgcgcagcacgcgagtgaaaagaaagacgagtcgtcgtgaacgaataaggagcagttgcgtgaagcgcttcccaaaaaccttatttccgccttctcccagcggaggacatcgaagctctcccgatcgccgatgcacgccagtaagcgggatggagtagactacgagcgacagcgcgacacataggatgaggacgtcgaagctctcccgattgccggtgcacgccagcgagctggatggagtagactacaagaaacggcgcagtgcagaggaggaggcaaaccgccttctcccaatcgacggcgtagtacagaggaggcaaaccgccttctcccggtgcaggacgttattaagctggatggagtagactacgagcgacgacacagtatagaggaggaggccaaccgccttctcccggtgtaggacgttattatagagaggcctgctctcccgatcgccggtgcatgccggcgagctggatggagtagactacgagcgacgacgtagtacagaggaggaggcaaactgccttgagtgacgatgcagaggaggaggcaaaccgtcttctcccggtgcaggacgttattatagagaggagacctgctctcccgatcgccggtgcacgccggcgagctggatggagtagactacgagcgacggcgcagtacagaggaggaggcaaaccaccttctcccggtgcagcacgttattatagagatatcaggacagtgcagcacgttattatagagatatcaggacgccaaccggactccacgacggcgcagaggcaaaccgccttctcccggtgcaggacgttattatagagaggagacctgctctcctgatcgccggtacacactggcgagctggatggagtagactacgagcgacgacgcagtacagaggaggaggcaaaccaccttctcccgctgcagcatgttattatagagatatcaggacgccaaccgaactccacgacggcgcagaggaggaggcaaactgccttctcccggtgcagcacgttgttatagagatatcaggacgcctgagggatggcgcagaggagggtgcagtattatagagatatcaggacaccaaccgggcaatggtttcacgtcgtgcgcgcgccgccatgccatgccaggtgagcgagcgtgcgtgttccccctcttctctccacctcacacgcttcaagtgagtaggagggcatcatccccctttaaggaggtccccctctgctagaataagcaaatgtggtaactcccccatgcatgacatctaataaaggtggccttttgtgatttttcaaagatttaatttttgagtaggctaaaggccatctattaattcctacaggtacgcgacgggggaggccggttttggggagctggacgtgggtgaaaccagcgtcggcatggtggagcagcagtgcagcagtagccccgtcatgtacgcgctggtgcagtgcacgcctgacctcttgccggccgactgccggagctgcctggccggcatcgcctcgcagatgcccaggtggttcagtagcaacaccagttaccgcctcggcgggaggattctcggtgtccggtgcaacctgaggtacgaggtcgatcgcttcttcctagaaagcaacgagaccatcaagattcatatgccaaaaccgaaaggtactactacgcgcgtacgcgcgcccgccctttctatgcttgtctaatggcctctttttttttaaaaaaaaaactgccacaagtttttttttaatctaacttatagtataattgtaatataatttcactgtacctataatataatataatataacttgcatataagtattaaaataatatatttaactttatatctaacttatatagagattacaatgtggttacagtacaataacaacattttaattacaatgtaactatagtgtaattacattgtagttacactacaactataatatatatatatagttacatttgaaagtttttttaccaaaaatacttgcgacaattttttagcaattcttttttttaaacgcagtacaaacacataagctcgatcataacacgcgcataatcactcctataaacacacccatatgcaataacggagccaaaaaattctcaaatgtagggctcaatctatccatttattctatactaaaagtccattaaatttactacaaacactcataaatcactatgtgacgctcttacaaacggtcctacgccgccacgagacgctctaataaattagagaaaaccttataaatttcgagaaaaaaaaagaaaacccttgatttttatttaaatgaatgaacccattattttaaagcattagattacatttattaaaaaaatgcatcccacctaacctctccggaataaaaaaaaatcccatgtgatagtatgtataaatacgtaactacttactactcacggaaaaaacaacaaaaaaaatacgtgattacgattgaaaaaaagaagtattagtcctttcacctaattgctacgagagaaacatattcatacgcacttcaacaaaaaaaaaaactgaaaaagaatctcacgtgtacatataaatatgtactactattcacctaattgagaaaaaaacaaaaaaaaaatctcccgtgcacgtaaatagtacacaccgtcctaccctcctcaaatctttatacgtacaagaaaacatccaccgtataaaagtataaacttatctaaattagttgtatataggaaaagtattacaactacatttatattaactatcttataattatactgtctttctctcttttttaataattaatagtggtaactatactaatttatgaaccttggcactcctctttcccgtagaaaatttatagatatattaattatattttgattaaacaaatatcacatgaaaccaaattgtatcctcttcatgttattctcatccaaatagtcttataagtagtaaaaaaaaagtaaatttgacaacataggttattctatcattcgttaccccacaaacatttataactaatataactaatacaagagaaatatcacaacatgtattagctcatatgtgtctgaaggattagtgctcgagcaaatacttttttcacgtggttctcgccactaagtctgcagtattagattttttaagtggtagattgtaattaatacaagtaatgtgataatgtgattgaataaagtgccaaatttcccttaaaatcatatcaactgctatgttttgatttagaaaatactagtatgtttagtatcttattctagccctttaatttatatgttgtccaaatagctataaacaagttgtagattatgcaatcatacatatatttcctcagagatatacatgactgagttataataattgaatagtaatagtccatgctaacaaatatttcgaaacgaggttgtatttgacgacatatatcattccatcacatatatttccccacaaaatccatgaacatagctaagttagatctatagcatacagaagaaatatcaatacccacatcgactcatttgttcctgagagattgttggttgagcgaatattgttccacatagttctcggtaccatctaggctgattgattatttaggcaaattattggggatgactcccggtcgggcgcccgatcgggaaggggtaaaatcgggcgctgacgtcagcgttcgatttacgtgcaaaattattttaaactgatttatctcttaaattatttatccaaatcatgatctgattgcaccattaaattcgttgcaattaaatcttcaaaacaagaccacacatggatatattctgacaaaaattttttttagcttattattgacttatttttaaatgttgcatgatgttccaccagatatatcggaattgtttcactaagtagataaaaaatgtttcactcgtttaaatcgggtgttgtttcaccttatataaaaacaatgtttcagcaaatagcgaaagaatgtttcagttcactgcaacattagatctatacatatacatagtgaaacattgtgagtacactagatgaaacatttttcggtagaagaaaaaataaaccaaattcctttaatagaggtttccaaaatatgtaggtttttttgttgcaatggaatgtttcgttcatagcaacattagatctatatatagtgaaacattgtgagtacaataggtgaaacattttgggtggaacaaaaaatgaaccaaattctcttaatagagagtttccaaaatatgtgggttttttgttgtaaaagagtattttaattcactgcaacattagatctataaatagtgaaacattataaatacactaggtgaaacatcttttatagaaaaaaggggagcagaagtgggtaggcccaagtaagcacgtgggggagggggcgcggggggagcgcccgatccggctccccctgcgccgggcgaccggcaaagagcatttccgaaattattgggcaatatggttgaataaatttaagtaccgtccgtacacttttaactcttttactcttttaattagacttttctttatttgggccgttggggtctattaggctcatccacgctaatgaattaatggcttattttcattccgttaatgatcaagtagtttaaaccaatatgaggccttcatccaggtgaccctatgtccccttcttcgttgacaaaccttatggtattatattcatcctttgagttcttcaatttgtgatctacatataaaaactacaatttgtaagagctaaaagggtgaaaacacgtctcaaaaaaatgtttcaatgtacatggatgaatataacatactatataaatatataaatgtaggatcgaaacacaagaactaagccaaccagaggagggtgaatggtaggtatacccaaaaaccgaaaacttttagcggaaataaaagttaccctcaaattcgacggatcgtggtctaaccgaagttgtcctgtcagtctgatcgcctggttgccatcggtttgaccgagattagatctccggtctgaccgccgagatcagctgccgctcgctgtcgccgccgccagtctgaccgcccgtatgccgccggtctgaccgccagtgagtcgtcggttagaccgctgaaacccggtgaaacacaaatcgaagaactcttaaagtagatgacaactttattgattctctctgtgtttacaaagtgcaacaacagcactccttacaaaatctcgactaaactcgaaaccctaactaaactagcaactcaattgctcttaaaagcgataccaggaagcctcacgctccccctctatttatacatgaggtaggcagcctaaagccacgaaccaaactcatactagaagtcctaatccccataggaaaccctctagtacaagaaacaaactttatataaccaatcataccaaatttggactccttccaaattcgactccacatcccatacgcacacaatacctccatcgtatgccatatggaatcttcaccaaccacgtgcatcaactctagcctaagtatcccgcatgatatctgaccaccacggacatcgtcttaccaccaagccgattcccggtccatcaccgcaaatactctctcgaggcatcgagtcacctacacatgaaacaaacaaagaaaccatattccgagaccaagctatccccaacttgactcattgttagcaaacaacagtattacatacgtatagtatccatctagaagccataaccatgaaacaatcacggatatccaaagaaacaacccgaaaccgaaaccgacacagtgtcggccggtcagaccgcgggccggcctgtctgaccgctcaacacaagccggtctgaccagcaaccgcggcctggtctgaccggtcccgacaaaacaacaaaccctgttcaaattatatccaaaatcactttgacagtattctccaaatatcaaaaccaataatcacagatgccaattgttcatcacagaataagaaccaaaacacacattgatcttacaataaattacttcccccattttatattataggtcattttgactattattctagtcaaatttctttagatttgaacaaatttatagaaaaattaatagaaaaacatttacaacaaataatatatttgttttgtagtgaaaatattactatatttattttataaaactgggaaaacttgactgggaaaaaagttaaaattgcttgtaatataaaatagagagggtgattaatttgcacctacatgctataattctatcacattgcttgcatttgcaggttcattgagcgcagggaagatcgtcggaatcgtccttggagtagtagccttcgttattctaattttctccttgattatacttgcattgctcaaaagactaagagaaggtgtgattaagttgttgcgatggccttaattataataccgatctaattcttaagcaggttctgattttttacgtttaattaatatttccctgtgatttcgacctgtacatgtagtaattcaagagtcagaacggcaaaagaaactagcaaaacttgagactgagatcatagacgagattggaccgctcttttcacgctatactttacaacagataaaagaagctacacgtgatttctcaaatgaaatcggaaaaggaggttttggccatgtttacaaggtaatttgattagatgtaacgacatgtcttatctataaacatccaattgacctattatatactcccttttctgaatcttttgcagtaaatagctagcactgatccctccattcgacaatatgttcttttttacccgaatccactcaacaatatttgacattgggtggcattaagtttatttagtactcccagcatcaaatattgtcataatatcataaacttaccatattttatatacttactgtatataacttgtgaacaaagttgtataatttgaaggtgtgaaaagaattatgttaaattaatgttatatatttatatgacagcagggagtacaaattatcatgtggtcaaatgctaaactgtccggatatagtctcatctatactcttcttaggctgtgtttagtttctgaaattggggagaagtttgtggaaagttggtagtttgaaaaaaaaagttgagaatttatgtgtgtaggaaagttttggatatgatgtgatgtgatggaaagttgggagttaggggaaagtttggtgtgaactaaacacacccttaaaataaggcaatggtggtggcctcaccaagtatagtatttttttatttaccatctacccatcatgctttctactagctacccatgtacttttatgttataaaataacacatctacatatatatgattctatcatatttcacctgtacaatataacatctataggtacaaaattgtccaaaaaacctcactattaatttgttttaatccgtagtaaagcacgggcatttggctagcatgggtaaatagaatacgcttacgacgcagatgactagtaactgtgctaatcgcaaggatctgattattattgtttagacttaaatttggactgatgtactaaatttatgtgttttgccatcatatatttttagggtaaactaccaagcggaactgatgtagcagtaaaaagactcgcggtatcttcatctggccaaggttttgaccaatttatgaacgagattaaacttatggcaactcttcaacacaggaacctagttaggcttctaggtttctgcatccaaaacgaagaaaacatactcatctatgagtacatggagaacggaagcttggatgatgtgttttctggtatatatatcccaagttcccaacccttatattacgaaaagaaaaatccttataagatcatgtgttttcactcaatcctttctactccactaaattttgccttgttacctacatatatattcattttgatcacttatatattcattttctgttggttaaccgtgaattaatagtttgattttttttctaaaatgactattttgcctttaatttgtcagcgcgcgtgtatatatcttaattattgaaaacacttaaactgagtgatttctaaaatctatccatattttcccgatattttattagttatatgttcagatattatttgaaaagattaaacttgcagatcccgaaagaaaatcccggctgctagattggtctacacgcctccgtgtaattgatagcatagcccaggggcttctctacctccacagattagcaaaacagaatacatgcatcgttcatagagacattaaggtcaacaacattctgctcgatgcttcaatgaatgcaaaaatctcagatttcggaatcgctaagatattctgcccaaatcttatggagtcagcaacaaccaaaggatgcggatcattgtaagaaactaattgcgcgtacatacataactgattttagaacaaagaagctcaccttctattaattaatttaatcctggcctagctttacctttgtctagcttgctcaaatcgtccttaattacactacatatgctactaatgattaaattttgcctgaaatattatcagtggctacattgcacctgaggtgttacttaccggcaccttctccgataagtctgatgtgtatagccttggcgtgcttatcttggaaatcataagtgggacaaaggtgaactctgcctgcttctttcaacaaggaagatcagacaacctgttgacctgtgtaagtaattattatctctagtttgataaaatacgggatggtgctctgtgctcatcttctctattctgtagaaagatctatatatgcaggcaagtacatgccatttctggtttaagaatttgcatcatgtatacatgaatagtacatttgtagaaacacttgataatatatagttttagacatatacttgcatttttagtgcttagatcgtttattgatccggctttgtaagaaatcctaaaggataacagagttcttctattagatatatatgcatatattttcattaaaaatattagaacacatcatatttatttatttgaaaacactgcatccgcactgcatggtccttgtcttttgataaaaaatctaattattttcattacatatatttaagaaagaaacaattaactgttccttcaaaacagagaaagaaacagttgaacactattctgatgataaactggcaggcatggcaactgtgggatgcgcaaagatacaaggaccttgtggaccgctcgttaatatcagcaggagaaaacattgaggacgctgtgttaatcaggtacgtccagatggcccttctctgcgtgcaggccaaccccgagcatcggccgaacatagacaagatcgtcgcgatgctgagcaacacggaggccctggacgtccctaaggaacccccggcatattacaacgtacaagttcccacatcaagtaatcatagtggcgctgtcacccccacgatgttctacactagtatttctagctag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0568400, RefSeq:Os01g0568400