Os01g0571000

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Revision as of 04:45, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0571000| Description = Mitochondrial substrate carrier family protein| Version = NM_001049910.1 GI:115437763 GeneID:4326348| Length = 3501 ...")
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Gene Name

Os01g0571000

Description

Mitochondrial substrate carrier family protein

Version

NM_001049910.1 GI:115437763 GeneID:4326348

Length

3501 bp

Definition

Oryza sativa Japonica Group Os01g0571000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:23574899..23578399

Sequence Coding Region

23575003..23575116,23575874..23575903,23576003..23576088,23576181..23576391,23576604..23576733
,23577475..23577659,23577749..23577880,23578064..23578168

Expression

GEO Profiles:Os01g0571000

Genome Context

<gbrowseImage1> name=NC_008394:23574899..23578399 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:23574899..23578399 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagtagtcctatcactcttcttcctccccgcgcaaatcctcgccgccacttggatgccagggagctccacctcgccgccgaccaccaccaccacccttctctcctccgctccccgctggagagggtcaagatcttactgcagaccagaactcatgggtttcaatcccttggtatcctccaatcattgaggaagctgtggcagtatgagggaattcgaggcttctacaaggggaatggcgccagtgtgcttcggattgttccatatgcggcattgcattacatgacttatgagcagtatcggtgctggatattgaataattttgctccatcagtgggtacagggcctgtggttgatctattggctggctcagccgcaggtgggactgcagttctatgtacctacccattagaccttgctaggacaaagctggcatatcaggtttcaaatgtgggccaacctggcaatgctttgggaaatgctggtagacagccagcatatggtggtatcaaggacgttttcaaaactgtttacaaggaaggaggcgcacgagctttataccgtggagtaggcccaactctgatcggtatcctaccatatgctggactaaaattctatatatatgaagacctgaaatcgcgagttccagaggattacaagagatctgttgtattgaaactctcttgtggtgctttagctggtctttttgggcaaaccctcacttatccactggatgttgtccgaagacagatgcaggttcagaataagcagccccataatgcgaacgatgccttccgtataagagggacatttcagggtctagcactcattattaggtgccaggggtggaggcaactcttcgctggcctaagccttaactatgtgaaggtcgtcccttcggttgctattggtttcacaacatatgacatgatgaagaatttgctgagagtgccaccccgagagagactttatcaatcgtctggtaacgcatga</cdnaseq>

Protein Sequence

<aaseq>MSSPITLLPPRANPRRHLDARELHLAADHHHHPSLLRSPLERVK ILLQTRTHGFQSLGILQSLRKLWQYEGIRGFYKGNGASVLRIVPYAALHYMTYEQYRC WILNNFAPSVGTGPVVDLLAGSAAGGTAVLCTYPLDLARTKLAYQVSNVGQPGNALGN AGRQPAYGGIKDVFKTVYKEGGARALYRGVGPTLIGILPYAGLKFYIYEDLKSRVPED YKRSVVLKLSCGALAGLFGQTLTYPLDVVRRQMQVQNKQPHNANDAFRIRGTFQGLAL IIRCQGWRQLFAGLSLNYVKVVPSVAIGFTTYDMMKNLLRVPPRERLYQSSGNA</aaseq>

Gene Sequence

<dnaseqindica>105..218#976..1005#1105..1190#1283..1493#1706..1835#2577..2761#2851..2982#3166..3270#ctcctcccccacccaaacccacggcggcagattcgatctcgaattctcgaactctctcgatcgaaccctgtgccctctgctccccgcaaaatcctccgcatttgatgagtagtcctatcactcttcttcctccccgcgcaaatcctcgccgccacttggatgccagggagctccacctcgccgccgaccaccaccaccacccttctctcctccgctccccgccgcggcgcctaggccgctgccgccgccgatgggctaggagaggagagggatcgccgcctccctgcgatcgccaccgggggagccggaccctctccgcgagatctggttaattgatttgcctactaccagtattccgctagattctggaccgattcctctctgttgatgcaaccactgtacagttgttgctttccttgatgatcagaaggagctggcgatttcggaggtgaatgcgttgtttcatatgggtttgcagcttatgctacaacagctatctccgatttagtttattacctttggggagcgtagagattggattccgctttgcgttttcctctttcctgcgagattctagcttatccttcgattaaacctattcgcgcggctattagcgcaagtggttaggacggacgcagactaaaaaaggttaggttattagggatttggttttccatttggattgccgattgcgggagcatatcctattgggagattccggcactgtaaagatatccttggcaactgagttgatttaatgttaatgttagtggtggtggggagggcagataatacgcattctgatctgcctgtcaagttgggggagaagagatgggttcctcacaggaatccactttttcctccgcctcaacggccgcgcaggtgaatgcctgcgcgctggacttgctcccggtatacgccaaggagcttatcgccgggggtgcagccggtgcattcgcaaagactgcggtagcgccgctggagagggtcaagatcttactgcaggtttgaactgctcagagttccatttcattattatgtggtagctgaatgacatctcagcttatgccaatttctgagtgtacgtatgctgttgctttctagaccagaactcatgggtttcaatcccttggtatcctccaatcattgaggaagctgtggcagtatgagggaattcgaggcttctacaagtaagttacatggagaaaataccttacctcaggctctggctgctcaatttagtatcttaatttttatttcgtgttacttactgttcatgaagggggaatggcgccagtgtgcttcggattgttccatatgcggcattgcattacatgacttatgagcagtatcggtgctggatattgaataattttgctccatcagtgggtacagggcctgtggttgatctattggctggctcagccgcaggtgggactgcagttctatgtacctacccattagaccttgctaggacaaagctggcatatcaggtattgcatgcccatcctaatgctttgttgattgtcatctttagtagtcaagaatctctctcagtagaactatcactgaaattattcgacaatcagcattagtagttcgctagtattttccagcaaatattagtagtttctgtgatgccatccttgctaaggagccattggccatggattgtatgtaataattttcttcataattgctctaggtttcaaatgtgggccaacctggcaatgctttgggaaatgctggtagacagccagcatatggtggtatcaaggacgttttcaaaactgtttacaaggaaggaggcgcacgagctttataccgtggagtaggtacgtcctgtctgacaactccctttgctatggttgaagttagcatctttaggtttgttagtgtgagcgtaacataaaatcatatttcttctgatctgctgcattgttgcatagtctgcataatctagtgctgcgcatgttgtgcagctttctttagactgcatcaaggaagaaatcaaaatgaacaactgattgtacatgaacctatgttttctttttggtcattttgggcacttatgcccttcaaaaaacaatgtgtactacaaaaagacgaaacacattttgcacaattttttttgctggcacacttgttccaacatgttgcacatctaaggattttctaagtaagcaggcagacaaaccaaaataggttcatatccacataggacctaaaatccaccttctgtttcaagttttctgttcagcaagctcagattaatgacccataagcatgcagaattgcagtgtattctaaaacaaaggcaccatcgtttagtcaccctctagttccaatgaatcaagactctattttggtgatctaaaagacagttgccaggatgccatatatgactgtagcttacaataaattaacaccatttgtatgctgaaacctttgtatatgaaattcctcgttattgtggttactgtactagaagggaaaatttgtattgagatattatcttagaatttatttagtccgtgtacagttgtgttaaaattttttcttctaatcaatctcaggcccaactctgatcggtatcctaccatatgctggactaaaattctatatatatgaagacctgaaatcgcgagttccagaggattacaagagatctgttgtattgaaactctcttgtggtgctttagctggtctttttgggcaaaccctcacttatccactggatgttgtccgaagacagatgcaggtacaaattaaactctcagtcaaagataatctgtgcgttataatttagattgcaatgcctgattaattcttcacctgtcctgcgttcaggttcagaataagcagccccataatgcgaacgatgccttccgtataagagggacatttcagggtctagcactcattattaggtgccaggggtggaggcaactcttcgctggcctaagccttaactatgtgaaggtaataatcccaactgagtttcctatagagagaaggcaaaataaaaaaggaagtgtactaggtcacttttattctgtttcagttatgtgcatctattgaagaatagggacaacagagatgctcatttcaaactgatcttaaatatgcagtgatatccaaaatatgaacttatcatgttttcaggtcgtcccttcggttgctattggtttcacaacatatgacatgatgaagaatttgctgagagtgccaccccgagagagactttatcaatcgtctggtaacgcatgaaacggcactggcctaattgtatcaggacaaagtgaattcaataaactccacccggtggcgttgtattttcaatcataaattctatcgctatgttgcataggagggagataagtcgtaattaactgtttgatttgtaaataatgatagtcatttgagttactgtagacttggataagcttgtgtattgaatgtgctacctgtattatacaatttgatcaaatattgcaactg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0571000, RefSeq:Os01g0571000