Os01g0574600

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Revision as of 04:45, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0574600| Description = Similar to Gamma hydroxybutyrate dehydrogenase (EC 1.1.1.61)| Version = NM_001049921.1 GI:115437807 GeneID:4326312| ...")
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Gene Name

Os01g0574600

Description

Similar to Gamma hydroxybutyrate dehydrogenase (EC 1.1.1.61)

Version

NM_001049921.1 GI:115437807 GeneID:4326312

Length

2815 bp

Definition

Oryza sativa Japonica Group Os01g0574600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:23745049..23747863

Sequence Coding Region

23745209..23745370,23745475..23745579,23745666..23745738,23745844..23745914,23746005..23746057
,23746164..23746224,23746366..23746450,23746547..23746602,23746713..23746788
,23747281..23747346,23747578..23747795

Expression

GEO Profiles:Os01g0574600

Genome Context

<gbrowseImage1> name=NC_008394:23745049..23747863 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:23745049..23747863 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgatggcggcggcctccctcctgtgcgcgagggcggcggcggcggcgcccacgctgcgcctacgcggcggaggcaggggagcacgcctcgtcttctcctgctccgcctcctcgtcgtcgccgtccggggaaggagggttcagtgggaaggtggggttcctcggcctcgggatcatgggcgcacccatggcctccaacctcatcaacgccgggtgcgatgtcacggtgtggaacaggaccaggagcaagtgcgacccgctcctcagcctcggcgccaagtacgagccttcaccggccgatgttgcttcgtcttgcgatgtgaccttcgcgatgcttgctgatccggagagcgcggttgaggttgcatgcggggccaatggagctgcacaggggatggccccagggaaagggtatgtggatgtgtcgacggttgacgctgctacatccaagctgattggcaagcacattacaagtactggggcatctttccttgaggctccagtttcaggctcaaaaaagccagcagaagatgggctgctcatctttcttaccgcaggtgatgagtccttgtacaatagagtggcatccctccttgatgttatgggcaagtcaagatttttcctcggtgacgttggcaaaggtgcagacatgaagctcgttgttaatatggtcatggggagcatgatggtttcgttttcagaaggactgctcctgagcgaaaaagttggcctagaccccaatactcttgtcgaggttatttcacaaggtgctatcagtgctcccatgttctccctcaagggcccttccatggttaaagctgcataccctactgcttttcctctgaagcatcagcagaaggatttgaggctcgcattggccctggcagaatcggtgtcccagtctattcctacagtcgcagctgcaaacgagctgtacaaggtcgcgaaatcgcttgggcttgcagaccaggacttctctgctgtaatcgaggcgctgaaggcaaaggagcagagcaagtga</cdnaseq>

Protein Sequence

<aaseq>MAAMAAASLLCARAAAAAPTLRLRGGGRGARLVFSCSASSSSPS GEGGFSGKVGFLGLGIMGAPMASNLINAGCDVTVWNRTRSKCDPLLSLGAKYEPSPAD VASSCDVTFAMLADPESAVEVACGANGAAQGMAPGKGYVDVSTVDAATSKLIGKHITS TGASFLEAPVSGSKKPAEDGLLIFLTAGDESLYNRVASLLDVMGKSRFFLGDVGKGAD MKLVVNMVMGSMMVSFSEGLLLSEKVGLDPNTLVEVISQGAISAPMFSLKGPSMVKAA YPTAFPLKHQQKDLRLALALAESVSQSIPTVAAANELYKVAKSLGLADQDFSAVIEAL KAKEQSK</aaseq>

Gene Sequence

<dnaseqindica>2494..2655#2285..2389#2126..2198#1950..2020#1807..1859#1640..1700#1414..1498#1262..1317#1076..1151#518..583#69..286#cgcccgcatcgcactcgcagcagcagcgcctccttccttatctctctctctccccccttcctgcatccatggcggcgatggcggcggcctccctcctgtgcgcgagggcggcggcggcggcgcccacgctgcgcctacgcggcggaggcaggggagcacgcctcgtcttctcctgctccgcctcctcgtcgtcgccgtccggggaaggagggttcagtgggaaggtggggttcctcggcctcgggatcatgggcgcacccatggcctccaacctcatcaacgccgggtaaactaatccgcaactgctctcctccttccttttgcactctgctcttggtactagtagctgttactactgttctacatatctttttctctctcctgtggaattcgtctcgagcctagttcgtcagcttctgcttgtacggtttcgatggtgttcatggctgctgctgctgcttctgcttctgctgatgcttctacagttgtgtgcttgttttgtctcctcttgctgcaggtgcgatgtcacggtgtggaacaggaccaggagcaagtgcgacccgctcctcagcctcggcgccaagtatgccatccccacccgttgcatttccatttccatttccatttccatttccatttccatttccccttatgaatcaacaatctagctggctagctagctttgcttgcttgcttgttgaatgggtgaggcaatagtgtgcgccatgattaggattctggagctggacagtggacactgcaatgcaatgcagtgcagctctggattggtaggcacaaacggagattgttcataatttgctcttcgtttgtgattctttactttcttttcgatgacatatgctcttttcctgaaattccactcagaagtaatccacttgtagagcacagaggctttacagctataacaaatttgctgtcattactgttcatgctgacccaaacagagagacagggaaaagaaaagagagagaaaaaaaaagacataattctatttgacaaaaagatatgtacagcactttgcttgatacaaagaggatgccttgcctgcctacaggtacgagccttcaccggccgatgttgcttcgtcttgcgatgtgaccttcgcgatgcttgctgatccggagagcgcggtatatgccctcgtttcagaaaattcttcagtctgcaatactatttcgtgttcgtgaaagctcacatggcagatctaatcattcgtctaacggtttgtacctccactcaggttgaggttgcatgcggggccaatggagctgcacaggggatggccccagggaaagggtaatctttgctgtgagaaggcatcagaaagcctggagcatcaagaatgtgctggcctagatagcattatctcttatatcgtgttttctgtcacaggtatgtggatgtgtcgacggttgacgctgctacatccaagctgattggcaagcacattacaagtactggggcatctttccttgaggtagtttctggtccctgccactgatcgtaccctactcgtcatgtgttcaactgttgattgtgttgtctcaatgtgtcgctagcgatgcgatttcagctcttgtactgttggtccaatgctaactcgataccttttcagtaggctccagtttcaggctcaaaaaagccagcagaagatgggctgctcatctttcttaccgcaggtaaacttccacctgacacctccaagctttgtaattgtgagatttcagtgtgcagctgtcatgttccttattatgttacctgaaatggtccatacgtttgtgtaaggtgatgagtccttgtacaatagagtggcatccctccttgatgttatgggcaaggttaacttcttttatctacaatcagtactccatttaggccctcatattgagccaggaaatgcacttacgctgtccttactctgaaatcagtcaagatttttcctcggtgacgttggcaaaggtgcagacatgaagctcgttgttaatatggtcatggggaggtaccaaagaagtccttcacattcaatattctagcaaccttactcctgtagtctgttgatacttattaatgaatgagttctgatcttcttggcaaaatactgcagcatgatggtttcgttttcagaaggactgctcctgagcgaaaaagttggcctagaccccaatactcttgtcgaggttagttagctcttacagtgcttcagtggtaaatacccaagtacaggaatctaatctaggacacaccatacattgatcctttacaggttatttcacaaggtgctatcagtgctcccatgttctccctcaagggcccttccatggttaaagctgcataccctactgcttttcctctgaagcatcagcagaaggtagcccctacttgcatgttaatgttgccagcactaaaaaccagcaacaattgcatctcgtctgatttctgtggcactgcgaaaaactggatttttcatggcaggatttgaggctcgcattggccctggcagaatcggtgtcccagtctattcctacagtcgcagctgcaaacgagctgtacaaggtcgcgaaatcgcttgggcttgcagaccaggacttctctgctgtaatcgaggcgctgaaggcaaaggagcagagcaagtgaaaactgccattgatgcataggaaacaaaatgtttgttcagctgccattgatgcagcattgtctatcaatgaactgaaaccatggcaattctcccaattttgttacagaagtaatacttgtttttcaggaataaaaaactgattgatgacagaatacctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0574600, RefSeq:Os01g0574600