Os01g0575200

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Revision as of 04:45, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0575200| Description = Conserved hypothetical protein| Version = NM_001049924.1 GI:115437819 GeneID:4326315| Length = 4352 bp| Definition ...")
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Gene Name

Os01g0575200

Description

Conserved hypothetical protein

Version

NM_001049924.1 GI:115437819 GeneID:4326315

Length

4352 bp

Definition

Oryza sativa Japonica Group Os01g0575200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:23794889..23799240

Sequence Coding Region

23795303..23795984,23798110..23798490,23798635..23798747

Expression

GEO Profiles:Os01g0575200

Genome Context

<gbrowseImage1> name=NC_008394:23794889..23799240 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:23794889..23799240 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gatggtggccatggacgacggcgacgacgggagtggcttcttggtgggggacgccgaggccgagcacctgatgctgtcgtcctcgtcgccgtcgtcgctctcctcgggccgctccctctccatcgacagcgccggctccatgtcctccttctcgctcgacgccgccgcggcgctggcgatgtcgaccctcgccgtcccgcacccgtacccgccgcccgtcgcgcacggcatgttcgcctccggcgacggtggcggcggcggcggcggcgcagtcgacgaccacgaggacgccatcatgcgtgccatgatggccgtcatctcctccgcctcggcctccccctcctcctcgggcggctccgcctcctcgcccaccccgttcagccgggacagcggcgcgcaccaccagcctgcaggtcagccagccatggcggcgccgcagcagccgcgtggagggaacggcggccacgtggtggtgaagagcagcagcagcagcggcggcctcgccgtgccgatggatcagaagcccggcggcggcgggcggggacggcagcaggaggaggcggcggcggcgagcgccaccaacagcagccagctctaccacatgatgtcggagaggaagaggagggagaagctcaacgacagcttccacacgctcagatcactcctcccaccttgctccaagaaggacaagacgacggtgctgatcaacgcggccaagtacctcaagtcgctggagacggagatcacggagctggaagggacgaacacgaagctggagaagcacatcgccggcggcggcggcgcggcggacgccgccatgagggctcgccgggcgcagcagagggccaaggtgcagatcagcaaggcggcggactcgcagtcgcagcagctggtgagcctgacggtgatggtgatggtggagtgcgacgtggtggagctggtgctccacatcctggaatgcctcaggtggatgaaggagatcagcgtgctgtccgtctacgccgacacctactcgccgcagcttcttctcaaggccatcgccaacatcaagctccagatcgtgggaggagattggaacgaggcgtcgttccacgaggcgatgacgaaggcggcgaacgacgcgaccatttcctgcgccccgctcgcgatcacggcagcacagtgattgctgattag</cdnaseq>

Protein Sequence

<aaseq>DGGHGRRRRREWLLGGGRRGRAPDAVVLVAVVALLGPLPLHRQR RLHVLLLARRRRGAGDVDPRRPAPVPAARRARHVRLRRRWRRRRRRSRRPRGRHHACH DGRHLLRLGLPLLLGRLRLLAHPVQPGQRRAPPACRSASHGGAAAAAWRERRPRGGEE QQQQRRPRRADGSEARRRRAGTAAGGGGGGERHQQQPALPHDVGEEEEGEAQRQLPHA QITPPTLLQEGQDDGADQRGQVPQVAGDGDHGAGRDEHEAGEAHRRRRRRGGRRHEGS PGAAEGQGADQQGGGLAVAAAGEPDGDGDGGVRRGGAGAPHPGMPQVDEGDQRAVRLR RHLLAAASSQGHRQHQAPDRGRRLERGVVPRGDDEGGERRDHFLRPARDHGSTVIAD</aaseq>

Gene Sequence

<dnaseqindica>415..1096#3222..3602#3747..3859#agctcacctgcgcttaggcttagctagtactaatcatcattagtgtatagctaagctagctccatttcttgcgcttcttggttttgtctgggaactattgtataggtctatatcgatctccatggatgaggtgtggtgcagcctggacagcatgccggccgacatcgccgccggcatccaccagccgccgccgcccgacctccacgacccctccttctggccggctttcgccgagtacgtaccatcacgatgtcgtcttcttgtttttgtgttcagaacttcagatgtttgagtttgtagctgactcttctgtttcttgtatctcagctgtgctgcgagcttcatcgccggcggcggcggcgacaatgcgtgcttcgacgagctcatggcgggagggtcgtcgggtgacactaggatggtggccatggacgacggcgacgacgggagtggcttcttggtgggggacgccgaggccgagcacctgatgctgtcgtcctcgtcgccgtcgtcgctctcctcgggccgctccctctccatcgacagcgccggctccatgtcctccttctcgctcgacgccgccgcggcgctggcgatgtcgaccctcgccgtcccgcacccgtacccgccgcccgtcgcgcacggcatgttcgcctccggcgacggtggcggcggcggcggcggcgcagtcgacgaccacgaggacgccatcatgcgtgccatgatggccgtcatctcctccgcctcggcctccccctcctcctcgggcggctccgcctcctcgcccaccccgttcagccgggacagcggcgcgcaccaccagcctgcaggtcagccagccatggcggcgccgcagcagccgcgtggagggaacggcggccacgtggtggtgaagagcagcagcagcagcggcggcctcgccgtgccgatggatcagaagcccggcggcggcgggcggggacggcagcaggaggaggcggcggcggcgagcgccaccaacagcagccagctctaccacatgatgtcggagaggaagaggagggagaagctcaacgacagcttccacacgctcagatcactcctcccaccttgctccaaggtagtctaaattaaaccccaactcactccatttcatctcaattctacaaaaaatatctaaaaaatttcatctcaaattctacatttatatcttaattatggcccaatgcctacatacattaattactatcatattctcactaccttaaaacactaactagaatctagatctctcaattagcatccatctaggtgtaaatcttcaactcaatgttcattatcaatacataccaactaggcatgcatggtggatatattccactcactcaaccgaagggatgaaaagaaaccccgacaaaatagagtaggagccatctatcacaattttacggagtaatagattaatacaatacaccatgttataattcttataaaattatttgtaaccatataggtgatgtttaattaattagctgattaagaggaaatcaatccccttaaaggattataagagtttcccataccaaacttgcaataatactatatgtagaccgtccattcagaaaactaatgcatatatgccaatcgaatacggattaattaacgcattcttttttatatttgcgattgggtgacaaaaatagttcaaattgggtagacaaggctccttttgttttggtttttatagagacaagagggatcgaatcgatcctctctgtccttttaatctttttcaaagtggacttggaagaaatggagtgagagtcttggcagtacaaaggaccatcctgctgcgctgtcaaaagcagtgtttttttaactacaagacaacaaacattgacaaaaggaaggtggttagaaggcccggccactaggttagattcttaatcaaatgtttacacgctgaaatgctggaaaggaacacagagggaaccttccaaaagaaagtacttaatgagccaattgcacgagaaagggatagactagctagttttttcatgcataaaatagtaggtcatttagtgtcaataattagttttggggctttttggcatatgccaccttaacaatcaaaggttatccttaatttttccttaaagtatgattgtgagggcaataattgtcagtcagccgtacccgcaagttatataaatgtttgaaattaaagtattaaatatgatgattttaataaagaaaatgtgttttgatggttgttgtaagttgtaacaaacgcgaatagtatttaattagtttgaatattgtcaaattgcacattgaaccgttaaacgtctacaggattcaaacaatgaaaaataaacaaaaactcttcttatgcgtcggagatggaatatatatagtgcggtcaaacaaacataagaaattaagaatacacagtttcatggactccaagttgatatcacaataccaattcctcttagaaaagtaattagcaacacgacaattagctcttaaatatacgacaaaggatatgctaaatttagttccttcagtgctttaaaaaagattaactgcagatactatggcagcagttaaacattgccaatttgtaaaaaagaggatggattttaattgaaggtcaagcataatggctagtcaaccaattttgttttcaagctatgggcatatcagcagaggaaggcgattggaagggtctctgcttgctctgtaatctagctggtccacaaattggcaagttgatgacaagggtagctgtcaggaagaagacaacaggaaagcaatttcaaaagccctaattagattgatgacgaatcgtggcgataaaactttagaaaaaagtcatataatttgcacagctttacacagtatttgagtggttaccaggaaacaacctgtttcatggaaacggaagtgacaacgtgagctgtccatatcattcgagcaaactatattattagctcctgctccacgataatgacagattttctacctcgatccccacgtagattattggattagagttgcactcaccaccatcagagatattaatatcacaaaagcaattatttctcgtttcctcattaaaagagatatttaaactttattttcttttctcgtatcgcgctctgatatcatgttaagagttaataatttaaactacgtttattataaaagattaattaaagtttgataactcatcgatgcagaaggacaagacgacggtgctgatcaacgcggccaagtacctcaagtcgctggagacggagatcacggagctggaagggacgaacacgaagctggagaagcacatcgccggcggcggcggcgcggcggacgccgccatgagggctcgccgggcgcagcagagggccaaggtgcagatcagcaaggcggcggactcgcagtcgcagcagctggtgagcctgacggtgatggtgatggtggagtgcgacgtggtggagctggtgctccacatcctggaatgcctcaggtggatgaaggagatcagcgtgctgtccgtctacgccgacacctactcgccgcagcttcttctcaaggccatcgccaacatcaagctccagatcgtggtaattaattaattgcaattactcacatttcattcatcactactcatcaaactactcagcatcaaatcatttttgtatacatcttccagtaatattgcatttaggacgatcttagctaaatggaatggaatgatcgatgtgcagggaggagattggaacgaggcgtcgttccacgaggcgatgacgaaggcggcgaacgacgcgaccatttcctgcgccccgctcgcgatcacggcagcacagtgattgctgattagtgagtgattagcagcgagcggcggcggtggcgacctaccggttaattcaatccatcctcatcgtcctcgcgcgcgtgcagtcatggttgaacgttgaagcagtaaaaaaaatatttatgtatggagggcgatgggttcgctacgtcataaccgatctcaatagttggaggaggaaaacgaggacaattcaaatacttcgagagtggggaagaatattgttagatatatattagggtttggttattcattcctttttccgtcttaaaatataataagttttgatgatgtataaacatgtataaatatatagctaaaagttattatattttaggacggtgatagtaattacgtagcgtatttttcaggtgtgccctagttgcagccgcaagctaggttgcagacgatggtgctttagtagcgctagcctagctagtataggtatatgtatatgtatatctctatgtatatacatgcatggtggtggttttgagtg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0575200, RefSeq:Os01g0575200