Os01g0580500

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Revision as of 04:46, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0580500| Description = Similar to 1-aminocyclopropane-1-carboxylate oxidase (Fragment)| Version = NM_001049943.1 GI:115437899 GeneID:4324194...")
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Gene Name

Os01g0580500

Description

Similar to 1-aminocyclopropane-1-carboxylate oxidase (Fragment)

Version

NM_001049943.1 GI:115437899 GeneID:4324194

Length

1472 bp

Definition

Oryza sativa Japonica Group Os01g0580500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:24146341..24147812

Sequence Coding Region

24146463..24146570,24146860..24147690

Expression

GEO Profiles:Os01g0580500

Genome Context

<gbrowseImage1> name=NC_008394:24146341..24147812 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:24146341..24147812 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagattccagtgattgatctcaaggggctcgccggcggcgacgaagaaagggagcgcaccatggcccagctccacgaggcctgtaaggactggggcttcttctgggtggaaaaccatggcgtggaggcggcgttaatggaggaggtgaagagcttcgtgtaccgccattacgacgagcacctggagaagaaattctacgcctccgacctcgccaagaacctccacctgaacaaggacgacggcgacgtcctcgtcgacggcggcgacctcgccgaccaggccgactgggaggccacctacttcatccagcaccgccccaagaacaccgccgccgacttcccggacatcccgccggcggcgagggagtccctggacgcgtacatcgcgcaggcggtgtccctcgccgagctgctcgccggctgcatcagcaccaacctgggcctcgccggcgccgccggcgtcgtggacgccttcgcgccgccgttcgtcggcaccaagttcgccatgtacccaccgtgcccgcgcccggacctcgtctggggcctccgcgcccacaccgacgccggcggcatcatcctgctcctccaggacgacgccgtcggcgggctcgagttccaccgcggcggccgcgagtgggtccccgtcggcccgacccggcgcggccggctgttcgtcaacatcggcgaccaggtggaggtgctcagcggcggcgcctacaagagcgtcgtgcaccgcgtcgccgccggcgccgagggccgccgcctgtccgtcgccacgttctacaaccccgggcccgacgccgtgatcgcgccggcgacggcggcggcgccgtaccccgggccgtacaggtacggcgactacctggactactaccagggcaccaagttcggcgacaagaccgctaggttccaggccgtcaagaagctcttcagctga</cdnaseq>

Protein Sequence

<aaseq>MEIPVIDLKGLAGGDEERERTMAQLHEACKDWGFFWVENHGVEA ALMEEVKSFVYRHYDEHLEKKFYASDLAKNLHLNKDDGDVLVDGGDLADQADWEATYF IQHRPKNTAADFPDIPPAARESLDAYIAQAVSLAELLAGCISTNLGLAGAAGVVDAFA PPFVGTKFAMYPPCPRPDLVWGLRAHTDAGGIILLLQDDAVGGLEFHRGGREWVPVGP TRRGRLFVNIGDQVEVLSGGAYKSVVHRVAAGAEGRRLSVATFYNPGPDAVIAPATAA APYPGPYRYGDYLDYYQGTKFGDKTARFQAVKKLFS</aaseq>

Gene Sequence

<dnaseqindica>123..230#520..1350#actcgctcatcggaagcaaatcatcttcctagtgcatacaagttagctcatcatcagcactagtacagtactactagacagttgtacgtacaagtagaagtagctacccaaccttgggagagatggagattccagtgattgatctcaaggggctcgccggcggcgacgaagaaagggagcgcaccatggcccagctccacgaggcctgtaaggactggggcttcttctgggtacgtgacaacacttcagagattatttgagagtggaacagttttgagcaccactgtttttttagcaatgcaaaatcgaacaggtctaaatgtaacatgttagcaaagtacttgaaattataaatgtagtagtacaactttgatgctaaataattagattatattttttttaaaaaaaactgttggtcagattttgattcttcaaatgtgaaaactgacaaatgtgtacctctatgttggctgtcgcaaaattaattctgcttcggtgaaatgctcgctacgaatgcaggtggaaaaccatggcgtggaggcggcgttaatggaggaggtgaagagcttcgtgtaccgccattacgacgagcacctggagaagaaattctacgcctccgacctcgccaagaacctccacctgaacaaggacgacggcgacgtcctcgtcgacggcggcgacctcgccgaccaggccgactgggaggccacctacttcatccagcaccgccccaagaacaccgccgccgacttcccggacatcccgccggcggcgagggagtccctggacgcgtacatcgcgcaggcggtgtccctcgccgagctgctcgccggctgcatcagcaccaacctgggcctcgccggcgccgccggcgtcgtggacgccttcgcgccgccgttcgtcggcaccaagttcgccatgtacccaccgtgcccgcgcccggacctcgtctggggcctccgcgcccacaccgacgccggcggcatcatcctgctcctccaggacgacgccgtcggcgggctcgagttccaccgcggcggccgcgagtgggtccccgtcggcccgacccggcgcggccggctgttcgtcaacatcggcgaccaggtggaggtgctcagcggcggcgcctacaagagcgtcgtgcaccgcgtcgccgccggcgccgagggccgccgcctgtccgtcgccacgttctacaaccccgggcccgacgccgtgatcgcgccggcgacggcggcggcgccgtaccccgggccgtacaggtacggcgactacctggactactaccagggcaccaagttcggcgacaagaccgctaggttccaggccgtcaagaagctcttcagctgattaagcacttggggattatattttgttgtgatgtgattaaaatcgcgtgcgctaatcggggtttgtaactttgtatacttgtttggtttgaatcaatcgtcgtgtagtacgcagggttcccc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0580500, RefSeq:Os01g0580500