Os01g0605000

From RiceWiki
Revision as of 04:47, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0605000| Description = Conserved hypothetical protein| Version = NM_001050050.1 GI:115438337 GeneID:4324104| Length = 1985 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0605000

Description

Conserved hypothetical protein

Version

NM_001050050.1 GI:115438337 GeneID:4324104

Length

1985 bp

Definition

Oryza sativa Japonica Group Os01g0605000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:25495660..25497644

Sequence Coding Region

25495720..25496004,25496098..25496389,25496602..25496651

Expression

GEO Profiles:Os01g0605000

Genome Context

<gbrowseImage1> name=NC_008394:25495660..25497644 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:25495660..25497644 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgcaatcaagctggacttgccagttccaggtgggccatacagaagtggccaggatgtgagggaggtaagagttgagggccttgtccttgtgcttcttgtggaagctcatctcgaaggaccggacctcgagccggtagttgccgttcccgccacggccgttgccgttgccgttgctgctgctggagttgtcgcggcagacgaggcgccacctgaactcggagccctcatggacgtcggccatctcctcgccctcctccatgctgaacatcatgctcttggtctcgtcgacgcggctgacccggaggcgctgcatgtcggtgttgatcctggtggcgaggtacccgacgccggagaagagcaggtcccgcacctcgtacggcaccagctcgttcacgacgccgcgcaccagcatcgccgacgccgccagggacgccgccgtggtgacggccctcttgtacgactcgatggccttgtcgtaggacgccatggctggctggccgtccggcgagcctactgctgctgttggctctggtacgtctctgaaaaccttctttccttccagacgaagtgtttggtggtggtcttaagtggccgtatgctggtaatggtcggtgttgaatga</cdnaseq>

Protein Sequence

<aaseq>MAAIKLDLPVPGGPYRSGQDVREVRVEGLVLVLLVEAHLEGPDL EPVVAVPATAVAVAVAAAGVVAADEAPPELGALMDVGHLLALLHAEHHALGLVDAADP EALHVGVDPGGEVPDAGEEQVPHLVRHQLVHDAAHQHRRRRQGRRRGDGPLVRLDGLV VGRHGWLAVRRAYCCCWLWYVSENLLSFQTKCLVVVLSGRMLVMVGVE</aaseq>

Gene Sequence

<dnaseqindica>1641..1925#1256..1547#994..1043#ttgcaacagtgatggtttgcacattgtagcatgtttagattgaataatactttactttgaaactgctacatatgaaaccttactatgtattttgtgataatagaaatagtatcacaagctcatttccctagagtacattattattccaaaaatgatcttttactagtagtcaaaacgatacatctgacagaatttgatgcactaattatatgctatgcacactgtttaagcatcattatttgcttgcatcttggggatcttgattctctgggacatcatttttcttcatcatccctttctctgtttcttctgccttcaccacctgctccacattttcagctttgccttccttgccaacatctttctttctcttgaggaactgaataaggccttcaagggcaacatcagtgtcatcattcctcatgagcacctcagctacctctgctggtgtcaccatgacctccttgatcaactcttctatctctgggtatgtggcatggttatcaatggagtggtagttagaggccagaattctaaatgactctgggcagcagtaacccatatggacatgcatgtccatcctgccaggacgcagaagcgcagggtcgagcctctccttgtagtttgtcgtgaagacaattattctctcctccccacttgttgaccaaagcccatccacgaagttgagtagcccagatagtgttacctgttccaacatattacccaaatacacaacatagttggtaaaaagaccccaaaaaaaataaatgtaagagaggctaatgattccaagttataaccttgtcctctgaaggattggatttggaactctcttgaccttcctcccgttgttgtagctctagagtgcagtcgatatcttctataactaggattgacctgttggtcatcccgatgagcaaccgtcgaagggttgagttccagttgacctcagtcagctcgagatcatatacgtcgaacttgaggtaattggccatggctgcaatcaagctggacttgccagttccaggtgggccatacagaaggtacccccgtttccatgctttgccaatcttcttgtagtattcctttcgcttgatgaacctctcaagatcatccataactgactgcttctgcttgtgatccatggcgagcgtggtgaaggtcgaggggtggtggaggtcgatggcgaaccacgactcaccttcgttcatgtagatcttcagcgtcctgtcctgatccttgatcttctttgcagtggccaggatgtgagggaggtaagagttgagggccttgtccttgtgcttcttgtggaagctcatctcgaaggaccggacctcgagccggtagttgccgttcccgccacggccgttgccgttgccgttgctgctgctggagttgtcgcggcagacgaggcgccacctgaactcggagccctcatggacgtcggccatctcctcgccctcctccatgctgaacatcatgctcttggtctcgtcgacgcggctgacccggaggcgctgcatgtcggtgttgatcctggtggcgaggtacgtcctgacggcgtcgtagagctggttgttggtccagccctcggtctcctcgatgatgaccatgtgctgggacgacatgcgcgaccgcaggtacccgacgccggagaagagcaggtcccgcacctcgtacggcaccagctcgttcacgacgccgcgcaccagcatcgccgacgccgccagggacgccgccgtggtgacggccctcttgtacgactcgatggccttgtcgtaggacgccatggctggctggccgtccggcgagcctactgctgctgttggctctggtacgtctctgaaaaccttctttccttccagacgaagtgtttggtggtggtcttaagtggccgtatgctggtaatggtcggtgttgaatgactgggcgtttagctcattagctgggctcccggttttatagacgccagttggttctgtgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0605000, RefSeq:Os01g0605000