Os01g0612200

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Revision as of 04:48, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0612200| Description = Cytochrome c oxidase, subunit Vb family protein| Version = NM_001050090.1 GI:115438501 GeneID:4325317| Length = 4562...")
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Gene Name

Os01g0612200

Description

Cytochrome c oxidase, subunit Vb family protein

Version

NM_001050090.1 GI:115438501 GeneID:4325317

Length

4562 bp

Definition

Oryza sativa Japonica Group Os01g0612200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:25912225..25916786

Sequence Coding Region

25912303..25912468,25912567..25912646,25912771..25912821,25915979..25916045,25916140..25916219
,25916366..25916431

Expression

GEO Profiles:Os01g0612200

Genome Context

<gbrowseImage1> name=NC_008394:25912225..25916786 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:25912225..25916786 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtggcgccgcctccaaaccctggccccggccctgcgccgcgccgcctccgcctccgcctccgcggcggcatcgggcgccgcgggccccgcctccctcgcccgcgccgcgccgctctccacggcggccgccgccgccttccgccgcaccagccctctcctgtccggggacaagccggcgacggtggaggacgtcatgcccatcgccacggggctggagcgcgaggagctcgcggcggagctcaagggggagaagcggttcgacatggatcctcccgtaggcccatttggtaccaaggaggccccagctgtcattgaatcctactataacaagaggatagttggttgtcctggtggtgaaggagaggatgagcatgatgttgtatggttctggttgaaaaaagatgaaccgcatgagtgcccagtctgttcacaatattttgtgcttaaggtcattggtgatggtggtgatccagatggacatgatgatgacgacgagcatcaccactaa</cdnaseq>

Protein Sequence

<aaseq>MWRRLQTLAPALRRAASASASAAASGAAGPASLARAAPLSTAAA AAFRRTSPLLSGDKPATVEDVMPIATGLEREELAAELKGEKRFDMDPPVGPFGTKEAP AVIESYYNKRIVGCPGGEGEDEHDVVWFWLKKDEPHECPVCSQYFVLKVIGDGGDPDG HDDDDEHHH</aaseq>

Gene Sequence

<dnaseqindica>79..244#343..422#547..597#3755..3821#3916..3995#4142..4207#gcctcctcctccctcctccccattcccccgccgccgccgccgagggcgccgcgacctgagagcacacgcacgcccgccatgtggcgccgcctccaaaccctggccccggccctgcgccgcgccgcctccgcctccgcctccgcggcggcatcgggcgccgcgggccccgcctccctcgcccgcgccgcgccgctctccacggcggccgccgccgccttccgccgcaccagccctctcctgtccggtaagggctctcctcctcggatctcgcgtgtttggatgtgcttccgtggggtggtgggggcggcgctgatcggtcggtggttgggggtcgcgctgcaggggacaagccggcgacggtggaggacgtcatgcccatcgccacggggctggagcgcgaggagctcgcggcggagctcaaggtggagatgcctatgccttttttttttcgtttttttttttgcttcttcgggttggagtattgctcctttttgtctgttctggaaatgggtttcgtgatttgccgatctgtctgtggtttcgcagggggagaagcggttcgacatggatcctcccgtaggcccatttggtaccaaggtgaggcgttcgctggtcgtagttgtaggatattttctattgattctgttgatctgaaattctgaatctgcgatcgtcaccatacgtggtggttctattccttagctttaggtttattagagctgaatttaatgaaactatgaattgcgaatgctttgctagattaccttcgacttgattcgcgttgtgctgggagggagaaactgcattttttgccagtagtcatgctatattgcctggttctatacactaatgcgtttcgggaattgttttcgtgtgctattcttcaatgcaccattgttgtaaaacttgttcactctatgacgggcaatgtgtttgatctccatgttcattgcctttgcctgtctactaaagcatcaatagttgttccacattattgagcaaatgattgttactagttaatatattggtgcaaactattcttcccccgttggcagtttgcgatgttatgactaatgctacttatgataagttcttgtcatatattgtagggatgctttctttaaacttctatgagtagttggtgcaggatacacaataatgtttacacagtgtgtgctatcttatttgatcagaaacgcagcgctcctttcatataaactaatatggctgacccaatcctattgattaatatgcatattggtggggtgccttttcttcattgaaactgttttttggatatgccattaagttacattcttttgactagctggaacacctaaataaacattagttgctgagaaatatcaagtttaatatgcattttttttgtgttgaaacaattgtcgaagtcgaaattagagactgaatggtgaacattatcttgggaatgttgcattaatctgtttttctatagctatctagcaaaccggtacctgtaactgggaactgtttataagtattgtttggcggtgagagtatgttaacttcattttgttgttgcatttgtgatatggtagtggactacaaacttactgtggttaaatgcttgagctatgcaatgcaaggacttttagtcctgatacttagattttttgttaagttggcaatctatgtctcagattgaataggaactatgaaaacctgtttttgaagcaggggtatttggtgacctgttgtagaatgtctttgtacatcacctaactgcaaatcacctgattgattattctgttctaagagtggtgagatcgttttttttttaaatttggactatcccaaaaacattagtgttcgtgccaaatttagtaggttattacggtaaccgctaggtggtgaactgtgcccttgtgttcctgcaaaggtgtttcgcttacctcttgatgtcagcagggatatttggtgacctgttgtagaatgtctttgtacatcacctaactgcaaatcatctgattgactattctgttctaagagtggtgagatcttttttttaaatttttttttactatcccaagaacattagtgttcgtgccaaatttattagggtaaccactaggtggtgaactgtgcccttctgttcctgcaaaggtgtttcgcttacctcttgatgtataccagaaaaaaataacgacacactaatgtgtgaagtggctcaacaagaaccagcatacatccgctgctgtgccctcaccacacccacctgttctttggatgattttcctcttcctgtagccaagtcttttaacattagtactatgtatgttttttttcttgaattctgatttctgaatgcctattattatcacagcatgttttttttctctaattctgatttctcaatgcctagtattatcacagcagaccacacaagcttggtcaatttatagacagtgatgtgatcattaaatatcaagttgcgtttttaatccgaaatctgtatttcatctgtaaagaggtcatcaaatatttgtaaatgagcatatttatacaccttcatgtatttgtacaataaacaaatgtctgtttgagggactcgtccagtttcccctagtttgctcccttctgtgttacactcccttatatccttgtgacacatcgtactgttacttatttgaatttacctgtcattcattttccccattgctgtttgcttttcctgttggaaacaggtttctatgttacttgtccacaattcttattttgaactgaacccattttaccccctgttggctttccgcggagtcaaaatctaactactcaactcttagaactttgttttatgcccttcagctagcaataccagtccaccgcttcaatcaatccagcccagtttatatcctatcagttactcaatctcttctgtgtacaaagtagtagccacctgcatcatgcccaatcctgatcacctgccacgctccacatcccaaatgtaggagtcaggaggcaagccatgatgacagagactctggtttagcagcgtgcaatggaagtgcaactgaaaattattttttttttcaattctaagacgtagaatatggtagtgagaaaattattgccgatgagaacctggatttctttttgttgagatacagatgcagaggagacaggagagtaatgaagaacattagaggcgggaccttgatttattcttattgacggtttctttcttgcctgtacatcaagccttaagtcctttccttaatttccttgacgctgtgtgtgaacatggtcctttgacctctgcaaacacagccacaatgggcagcagggtgctgcaagaggtggcgatagattgcacaatcccaagtattccctgctgattttagcctgtcctggctcaccatgacctttcctgtacttctacttctgctacgattaagtcttttgaatctgttgcagcatgttacacctttttgtttgtgtgtgtgtgggttggggggtagcctatccatgttgatgtcttgttgattaaacatgggtggtttagagtgagggcctgagggggatgatttgcactgattgtgatttgcgattgctttaaaatgatgaaatttcaactttggagctattcttttaaattggctgtaaggatgatgctggatctgaaccatggcacattagtctcttcatttattatcttgcagcatcatttgagcaccatgtcatgttattcatcaatttgctatggtgttacctgcaggaggccccagctgtcattgaatcctactataacaagaggatagttggttgtcctggtggtgaaggaggtcagtcagtgttgacttggctcagcgaaaactctaaactgccaaatattatgcaatactggtatcaacattttttcacttctttcatttacagaggatgagcatgatgttgtatggttctggttgaaaaaagatgaaccgcatgagtgcccagtctgttcacaatattttgtggtaattggaattcgttgtttgacatattactttaatttatgtatttagtaactgtttttattgaatgtagctcacagttccaagctgttttgattctgtaatgttctattgttctttaatggatctttgttgctcgccttttgcagcttaaggtcattggtgatggtggtgatccagatggacatgatgatgacgacgagcatcaccactaaggacgcccatgcctcgtggttctgataataagaatttgatgaggcagatgatttcatttaaacctttttagcaccagactgctctacggcgtccttgtttatgaatgcacacatttggccatcaagcaggtggtagttttttccttagggattttgtccaaacaaaaaactcatcgaggcttgacctgtgcatttccttcggagcatcatcgaataaaagatgactgcatcagctgcgtttttcttgtgtatcctaatggccatctggtgtgatggacctgttctattcagatcatgcaacagtttattttcagtgctcagtgagtccctgtttgcaagcagccactaaatcttt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0612200, RefSeq:Os01g0612200