Os01g0612000

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Revision as of 04:48, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0612000| Description = Similar to DNA methyltransferase PMT1-like protein| Version = NM_001185533.1 GI:297720200 GeneID:9268926| Length = 3...")
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Gene Name

Os01g0612000

Description

Similar to DNA methyltransferase PMT1-like protein

Version

NM_001185533.1 GI:297720200 GeneID:9268926

Length

3493 bp

Definition

Oryza sativa Japonica Group Os01g0612000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:25902715..25906207

Sequence Coding Region

25903220..25903295,25903456..25903520,25903609..25903689,25903808..25904032

Expression

GEO Profiles:Os01g0612000

Genome Context

<gbrowseImage1> name=NC_008394:25902715..25906207 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:25902715..25906207 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ttgagcggtgggggagtgctatgggtatcttttttttttcttagtttaagactcctgaatcaatcatttaatgatagattattatgttttactgatgcttggctgtggtgtctcctcgactgtttgcaagatattgtatgccctgaatcaaaacgatgctgttgttttaccaaaagttattatcgctatgtcaaggggacaggctccttactagctacgtccaataacctcaaacgaatttccaaagaggaccttgaaatttcttcactgaaggagttaggcttacgatttttcacccctcgtgaggttgctaatctgcattcttttccatcgagtttccactttccgaatcacataagccttaggcaacagtatgctatgctgggcaatagcctgagtgtagcagttgtggggcctttgctgcgttatctgtttgctgagacatag</cdnaseq>

Protein Sequence

<aaseq>LSGGGVLWVSFFFLSLRLLNQSFNDRLLCFTDAWLWCLLDCLQD IVCPESKRCCCFTKSYYRYVKGTGSLLATSNNLKRISKEDLEISSLKELGLRFFTPRE VANLHSFPSSFHFPNHISLRQQYAMLGNSLSVAVVGPLLRYLFAET</aaseq>

Gene Sequence

<dnaseqindica>2913..2988#2688..2752#2519..2599#2176..2400#ggggggccgaaaagcctttcagaagtccagcaaaagccggcaaggcgccgccaacgccgccgccatcatcgccggagacgatggagaccgcggtgccatggaaagtcctcgagttctatagcggcatcggcgggatggtactaacacccaacccaccctctccaccttccccactgcgaacttgcccgcacctgtctaacggcggctagggtttttgcgccacctgccctcccccgcagaggtactcgctggcggcgtcgggcgcgcgggccgaggtggtggaggccttcgacatcaacgacgttgccaacgatgtctacgagctcaacttcggccaccgcccataccaggtgcgctcggtttcttccccaaatccatctgtggtatcccaaattggaacctaggagaaaaagcttctggttagattccgcagttttgatttggttcggctcagatttaggagtagcacatagaacatggtattattgtgccaactgcaaaggtgatgagaagtgagattcagaacttaagctgctcgaccagatgtttaggctgagattcagaacttaaactgcttgatcagatgtttaggcacttcttagggagtatgcttacaagttttccacagaatttatgttctgcctagaatttctcaattagtagactgtcttgatgtatttgtttaaactgtccacagaattgcttacaatctggttgatttcttttgagtatgttgtgttgttttctataaccatttcacatggcaagggaacagttggtcatttgccttcctcatgttcatgtagtcattctcctggctcatctaccctgtcctgcagattaagcatatcattctacctgcatgatgattcttgtattgaattgtctaagtctttaacaatttcattatctgaactgtatcactgttatctaaatacagggaaacattcaaacactcactgctagtgacctagataagtataaggcacaagcatggcttctttctcctccatgccaaccatacacacggcaaggttttcttctggagctttctttcaacattatctgaccacttttcaaatttcactaatggatggagtatcgtgtaggactacagaagcattcagctgatgctcgagcattttcattcataaagattcttaacctaatgaaaaacatgtgctttcctccacaaatgttatttgtggaaaacgtagtcggatttgaggttggtgtaatctttggtttctttaaagcactattcttgaccgcagtattttatcaagttgtgacccctatttgtttgtgacaggtgtctgatacacatgaccagttgatagaggttctttcagatctcaatttcaacacacaagaatttatcctaagccccttgcagtttggtatcccatattctagacctcgctacttttgtctggtaagatttctggaggatctttcctgttgtttcaatgtgatctgtcacttgacgttataggacatgacatggcacaaatcttattgttactattacatatgtgcatagcttccaaagttcacaaattgtggaaatcagcaagggatgacttgggggtttgttgcttaagattggtaaaaagattgtatttgcccaagtgcttattaaaagaaaaaccataggaaattagtctggtgtcactacaaaactgagaaatcatgcaataaagttcctgataaaaaattgctggataataaactctaggttcttcaatagttcatttttgttcagctaagcaactcttcatttatttaacagtaccttgtctataggcgaaacgagaacctgtgagttttcaaaatccatcagacaacagcaagctgctccggacacctacattcctaacattggtaagggcaggtcacaacagatgtaacccggatgaagatgagctggaactagtatgcaaaccaatcagtgacttccttgaaacaataagtctgaatgtcgctgatcaggattcttcaggtacaatctctgacagtaagttcaataagcctataataattaccagtatctcatttgaacatgcaggttaaaaatattttttaatgccactctatattttgtagttaatgggtctgatggatgcaccccaagtggaataatttctcaagattatgtagtcccgctaaacttgattgagcggtgggggagtgctatgggtatcttttttttttcttagtttaagactcctgaatcaatcatttaatgatagattattatgttttactgatgcttggctgtggtgtctcctcgactgtttgcaagatattgtatgccctgaatcaaaacgatgctgttgttttaccaaaagttattatcgctatgtcaaggggacaggctccttactagctacgtccaatgtaaggctcattatattcaatctttcatctgctttgttttcaggcatccctggtgttgcctcttaatctgaacattcatgattccttttccttttatgattacctacttaaattacagaacctcaaacgaatttccaaagaggaccttgaaatttcttcactgaaggagttaggcttacgatttttcacccctcgtgaggtatgtgcttattgacaacttcacataggtccacacccttccgtatctatgttttgtctcatagcatgcaatattcatgatttttcaggttgctaatctgcattcttttccatcgagtttccactttccgaatcacataagccttaggcaacagtaagttttaatccctaccttttactctgttggaactcaatgaacttcaggaacatcataatcgcaatatatataagaacatgaatgtgactttctagttttgaaaaccagaccgcactgcctgaattgtttgttatcgctaacttacctatggtggcaggtatgctatgctgggcaatagcctgagtgtagcagttgtggggcctttgctgcgttatctgtttgctgagacatagtgatgttcaatcagttggcacatgatgctacacaggacaaacacattgaccttcctttgcccgtgttatcaccctaaagccaggttggttcgtgggtatgattcgtgtactccccgaagctgatggttgtggttcaaaccttgcaacccaattggagtgaatttcccacagtggtgcaacttcaacttcatagggcttggggacttgtcgattcatcggtgggaagaagacagcgtgcatgatggcccggcatgtatcggtgaaactctgacgcgaatcttacctagtagagtagagaagcttcctcagcattttccctttgccccaggcataagttttaataataatgttgaatgtttgaggtgttacagcatttgactcatgcgcattgtgaaacgaggttattatggtttagaactgaacttcaacttcatgagctcaccattcgactgtctcaaatcagtttgctttcttgatctttctgcaaagaggcaatattttgacg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0612000, RefSeq:Os01g0612000