Os01g0614500

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Revision as of 04:48, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0614500| Description = RNA-binding region RNP-1 (RNA recognition motif) domain containing protein| Version = NM_001050102.1 GI:115438549 Gen...")
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Gene Name

Os01g0614500

Description

RNA-binding region RNP-1 (RNA recognition motif) domain containing protein

Version

NM_001050102.1 GI:115438549 GeneID:4326641

Length

3054 bp

Definition

Oryza sativa Japonica Group Os01g0614500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:26025949..26029002

Sequence Coding Region

26027592..26028935

Expression

GEO Profiles:Os01g0614500

Genome Context

<gbrowseImage1> name=NC_008394:26025949..26029002 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:26025949..26029002 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatccctaccccaagaagcgcaagcccgacgagaacggcgcggccgtggcctcctccccggccgcgggcgccgccgcgctcggcctcacccgcgacgacctcctccgcctcgtcgagccgctctcccgggaccagctcgccgacatcgccgccaccgccgcgctcgcctcgggggtggccctcgacgccgtgcgcgccgccgccgaccgggacccggccctccgcaagctcttcgtgcgggggctcggctgggagaccaactccgactcgctccgggccatcttctccgccttcggcgacctcgaggaggccgtcgtcatcaccgacaagtccaccggccgctccaagggctacgggttcgtcacgttccgccacgccgactccgccgtcctcgccctcaaggagccctcgaagaagatcgacggccgcatgaccgtcacgcagctcgccgccgccggcgcggccgggggggcgtcgggcggggccgccggcgccggtggcgcccccgcggccgacgtctccctccgcaagatcttcgtcgggaacgtccccgccgacatgccgtcggagcgcctccttgcgcatttcgcagcctatggtgagattgaggaggggcctctagggttcgacaagcagacgggcaagttccggggctttgccctctttgtgtacaagacacccgagggtgcgcaggcctcgttagtggactcggtgaaggtgattgacgggcaccagcttgtctgcaagctagcgatcgaagggaaaaaggggaagcaatcgcagcagcagcagcagcaatctggacctggtggggctcagccgccccaaatgctccaaggcgggccgccggacatgccgggttcagggcttgggcttggtggaccacaaatgggtgcgcagtatggtggccctgggagtctgtcttcgtatggtgcatttgggggtgtaggcgctgggctaggtggtcccaatccgtatgcgaatttgccatcttccatgggcggcggcggagctgggttgggttcattgggcaatcagatgccttctgggatgggtggtgctggggctggtgcgtacgggcctgggggattgggtggtggttcatttgggggctcatcccagtttggtgctggtgggatgggggcttatgggggtctaggcatgggtggagcctcatcactgtaccgcatgcaacagggttcgggtgggcttccttctggcgggtatggtgagggtaactaccctcttccagggcctggtttccggggtcaggagggtggaatgtcacctggaccaggtggtagagctcctatgtaccccaatgtgcctccttatttctga</cdnaseq>

Protein Sequence

<aaseq>MDPYPKKRKPDENGAAVASSPAAGAAALGLTRDDLLRLVEPLSR DQLADIAATAALASGVALDAVRAAADRDPALRKLFVRGLGWETNSDSLRAIFSAFGDL EEAVVITDKSTGRSKGYGFVTFRHADSAVLALKEPSKKIDGRMTVTQLAAAGAAGGAS GGAAGAGGAPAADVSLRKIFVGNVPADMPSERLLAHFAAYGEIEEGPLGFDKQTGKFR GFALFVYKTPEGAQASLVDSVKVIDGHQLVCKLAIEGKKGKQSQQQQQQSGPGGAQPP QMLQGGPPDMPGSGLGLGGPQMGAQYGGPGSLSSYGAFGGVGAGLGGPNPYANLPSSM GGGGAGLGSLGNQMPSGMGGAGAGAYGPGGLGGGSFGGSSQFGAGGMGAYGGLGMGGA SSLYRMQQGSGGLPSGGYGEGNYPLPGPGFRGQEGGMSPGPGGRAPMYPNVPPYF</aaseq>

Gene Sequence

<dnaseqindica>68..1411#ctcttctccccccgcgccgccaagccctagctagggttttgcccccccccccaccctccccccccccatggatccctaccccaagaagcgcaagcccgacgagaacggcgcggccgtggcctcctccccggccgcgggcgccgccgcgctcggcctcacccgcgacgacctcctccgcctcgtcgagccgctctcccgggaccagctcgccgacatcgccgccaccgccgcgctcgcctcgggggtggccctcgacgccgtgcgcgccgccgccgaccgggacccggccctccgcaagctcttcgtgcgggggctcggctgggagaccaactccgactcgctccgggccatcttctccgccttcggcgacctcgaggaggccgtcgtcatcaccgacaagtccaccggccgctccaagggctacgggttcgtcacgttccgccacgccgactccgccgtcctcgccctcaaggagccctcgaagaagatcgacggccgcatgaccgtcacgcagctcgccgccgccggcgcggccgggggggcgtcgggcggggccgccggcgccggtggcgcccccgcggccgacgtctccctccgcaagatcttcgtcgggaacgtccccgccgacatgccgtcggagcgcctccttgcgcatttcgcagcctatggtgagattgaggaggggcctctagggttcgacaagcagacgggcaagttccggggctttgccctctttgtgtacaagacacccgagggtgcgcaggcctcgttagtggactcggtgaaggtgattgacgggcaccagcttgtctgcaagctagcgatcgaagggaaaaaggggaagcaatcgcagcagcagcagcagcaatctggacctggtggggctcagccgccccaaatgctccaaggcgggccgccggacatgccgggttcagggcttgggcttggtggaccacaaatgggtgcgcagtatggtggccctgggagtctgtcttcgtatggtgcatttgggggtgtaggcgctgggctaggtggtcccaatccgtatgcgaatttgccatcttccatgggcggcggcggagctgggttgggttcattgggcaatcagatgccttctgggatgggtggtgctggggctggtgcgtacgggcctgggggattgggtggtggttcatttgggggctcatcccagtttggtgctggtgggatgggggcttatgggggtctaggcatgggtggagcctcatcactgtaccgcatgcaacagggttcgggtgggcttccttctggcgggtatggtgagggtaactaccctcttccagggcctggtttccggggtcaggagggtggaatgtcacctggaccaggtggtagagctcctatgtaccccaatgtgcctccttatttctgaggtaattttttgcaacccttccgtgtcttgaattttgtacctgattcccttaggctttttacacccaaatgcttgataattgtcttgttatgtggttatgcctgaacattaacttaatttgtgtttgaattgtgattgctgcatgctgtgtttgcatttatgtgaatgtgtatgtgactgaaatagtgatatgtaagaaactctcactggttacacactgacagtctgtagagatatggggcaatagagtagtgcagaatttataggatgctacttctgacaatataggtttagtatgttaatgtgctctagttgctgattacttcgttctgtatatttttatgctgagaaatctctttgggtgttccttgttttggtagcatcaaggttcagtataatacattcatagtaatattacacactcttgattggtaaaatgttgctcttgtttgttgttgcaatagttgatttcagtgcctgtgttgcttttatttgttcatgtgttttttgtagtgttggactctaatttgcatccaaagtggactgtcttgtaatattcaaggtatttgatttcttataatgctatatcatgcgtacctgtgtggtaatttgcttggtcggacaatgttgcattatatacttgaccacatttctttgaaaggttaaagtgaaggcaactgtctgaaatttgaggttgatctgctatttgagtatatataataaagtatgatccttttggcttaaaactgttaatcctgcctgtttgcagtacatcatatgattgttcgttcttgggtactctggcctgtggatattttttgtaggttactcctgaatatgttttcgcaatacaagcacatttaaaaatccatttgcctggtttgctgtttgacgatattctacctgtttcattttttgccttttttgcttcataattggcatgcagcttattgttttactcaaaacatttgcaattttgaagttgccatatttttatacaagataataagactaatcaatattctctatcatgaatcctttttttttgttatttctttgttatttctttttttttttgttatcaatatttatgcatctttacttcacttgatatttcttctcaagtttcaaagttgtgcttgatggcattcccctttaggattaggcttgtgatatttgagcttgatgtattaagcaatactatatcttttattttactttaaagttatattatcttaattttgtttgtatatttgtgaattggtgaactattgattgaattccagtgaatgtgtgaatcaggtgtgtgacaactcttgggagcatatgctttgaatggttgtgctgaattcagaagttgtctgcttacatggatgtcttgcatattctggctgcctctgatatggaaatcagttttttgctctcaatttttctgttacaagataattcaagctagcttagtgttttctgagatctcttcattagacatgtactttctcataaatatgtgaggtgtcgtttcacattgttgtgtaatgctcattgtcttatgatatccagttacttatgattacatctggtgcttggtttatttgcgtgacatgttatttggtggcaacttgattggcgaaccatttgttatc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0614500, RefSeq:Os01g0614500