Os01g0616500

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Revision as of 04:49, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0616500| Description = Similar to 50S ribosomal protein L22| Version = NM_001050113.1 GI:115438595 GeneID:4326653| Length = 2764 bp| Defin...")
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Gene Name

Os01g0616500

Description

Similar to 50S ribosomal protein L22

Version

NM_001050113.1 GI:115438595 GeneID:4326653

Length

2764 bp

Definition

Oryza sativa Japonica Group Os01g0616500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:26137744..26140507

Sequence Coding Region

26137963..26138110,26138558..26138640,26138968..26139126,26139617..26139727,26139833..26139899
,26140004..26140272

Expression

GEO Profiles:Os01g0616500

Genome Context

<gbrowseImage1> name=NC_008394:26137744..26140507 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:26137744..26140507 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgggctggcgggcggcgggcggcgctcgtgccgttcttcgccggctcagcgcggcggcggaggcggcggcgaagcaggacggccgtgtgttcgctgccagctatagcggcagcagtggcggcgtgaatgctccgtttggcttgggccaatatgcaaaccttttgagggcacaagcttttgcatccaggggagtcgcgctgaacttccatcagctgatccgcaatgctggaatatctaccacaaggaacctgcttgctgcagatgatgctatggttcctgtttcttctcctttgacacctccacttggtgatggagaacaaactgacaaaaagggagcaattgttaagcggctgaaggtccaagccatcaagaaggatatcaagcagagccccaagaaggtgaatctggtagcaaagctggttcgaggaatgcgtgtggaagatgccctgttgcagttgcaagtgacagttaaaagggctgcaaaaactgtatatcaggtgattcattctgctcgtgccaatgcagctcacaatcacggactggatcctgataaacttattgtggaagaggcttttgttgggaaaggactttacctgaagaggttgtcctaccatgccaaagggcggtgtggcgtcatggtgagaccgaggtgcagactgacagtagtggttcgagaggctaccgctgaggaagaggcaaagatcgcgaaactcagagtcagcaactataagaagctgaccagaaaggagaagcagctaatgccgcaccgtcttatcgaggttagcccgaggtgggctcgcaagaggaaagaggaggctggtgctgctgcgtag</cdnaseq>

Protein Sequence

<aaseq>MVGWRAAGGARAVLRRLSAAAEAAAKQDGRVFAASYSGSSGGVN APFGLGQYANLLRAQAFASRGVALNFHQLIRNAGISTTRNLLAADDAMVPVSSPLTPP LGDGEQTDKKGAIVKRLKVQAIKKDIKQSPKKVNLVAKLVRGMRVEDALLQLQVTVKR AAKTVYQVIHSARANAAHNHGLDPDKLIVEEAFVGKGLYLKRLSYHAKGRCGVMVRPR CRLTVVVREATAEEEAKIAKLRVSNYKKLTRKEKQLMPHRLIEVSPRWARKRKEEAGA AA</aaseq>

Gene Sequence

<dnaseqindica>220..367#815..897#1225..1383#1874..1984#2090..2156#2261..2529#gactccccccaaaacccacgccgccgccgccgtctcttccctcccttctccgccgcagccgccgtatcccccctctctctccgggagctgaaagcgcccgaggaggagatcaggtagcctgtttattctcacccctagtatcccgacgcatcttgttttcttcttcttttttcgttacattttgtggtgggtgtggacgttgtcgcaggttctttggccatggtgggctggcgggcggcgggcggcgctcgtgccgttcttcgccggctcagcgcggcggcggaggcggcggcgaagcaggacggccgtgtgttcgctgccagctatagcggcagcagtggcggcgtgaatgctccgtttggcttgggtgcgttcccgtttgtctctaggtcttagcttttatttagttttgaacttatacatgatccgaatgctcatcagaagtacagactttaggtgatttatagttgatgttgataagaatgctgaattttttaggataaatcgcgttgtttctgttaaactctagtattaattttggattcagttgttattacacccttcagtatgtgttttttatcagtcgcactccgcattggtacttgtagctttggtactatcagttctttttataagctctgatataatttgaaatgatatggtgtgctgtcaagactatgtatttggggggaatggctgaatacataatttcattttgcttaaagctcttctctttatttcagtaattagtatagcgagaacattttggtcttgatattctcgttacgtgctaacaatgactgccaccatgtaggccaatatgcaaaccttttgagggcacaagcttttgcatccaggggagtcgcgctgaacttccatcagctgatccgcaatgctgtaatgcactcttccccatgtggccatgctacttcatcttcttttgcttttacatttcttatctctacaagttgatctcctgttagaactaaatcaatccttttacaattgcctatgtatgacactgattgaattttgaagagcacctcgataagtagctgattttgtgtctgttccatattggagccacatgtatatatgatcacattgcgttgctttgtaatggaatatattttgcttgttccgtgtttgacagaaaattaaattaactgaacttcggtcacactcttatttacatgggtatttggctcttttttttttctgtagggaatatctaccacaaggaacctgcttgctgcagatgatgctatggttcctgtttcttctcctttgacacctccacttggtgatggagaacaaactgacaaaaagggagcaattgttaagcggctgaaggtccaagccatcaagaaggatatcaagcaggtgaagaacaatgaaatactaactatatttccccctaaagtgattacatatgctgtcaccagcagtgaaagtttgaacgtgcagtgtgtcatgcctttgctgcattaactcttttatgtatcctctaacatgtttaaatgagactttcaatggttagtggcaaagcacatttaaaagtaacataatgaaagcagcaacatttcaatgtctgatgccccttttttagaagctgcaggtattgtttagtatatgtttttagcttctcattcataacttaatgttatatagttggtacaatcgtagtgttcactgagctgtttcctagttatgatcctgcttgattagagtaagcatatgttcatgtaggttatcaatatatcgagatagtagtgtagcacagactttctttatcttgtttagtgcacatattcttttactactatcatcaatagatgctcatctctctattttccctttttggctgttttagagccccaagaaggtgaatctggtagcaaagctggttcgaggaatgcgtgtggaagatgccctgttgcagttgcaagtgacagttaaaagggctgcaaaaactgtatatcaggttctgtagttaacaaaattttgtcctgcaactgctccttgtggtagatagggtcaggtgtgaccaatatttttcatgatcattcctttctatcaatcactgcaggtgattcattctgctcgtgccaatgcagctcacaatcacggactggatcctgataaacttattgtgggtaagaccttaagacaacatccatctcccccttagtccctccaatagtcattcgtaatggtttcaatctcattcctttctttccacttacctatcataccacagaagaggcttttgttgggaaaggactttacctgaagaggttgtcctaccatgccaaagggcggtgtggcgtcatggtgagaccgaggtgcagactgacagtagtggttcgagaggctaccgctgaggaagaggcaaagatcgcgaaactcagagtcagcaactataagaagctgaccagaaaggagaagcagctaatgccgcaccgtcttatcgaggttagcccgaggtgggctcgcaagaggaaagaggaggctggtgctgctgcgtagcatggcttcccatttgcaggatgtctgccttcattggccttgaagcggtgagtagccgcatatgctgaaatttacccaagaacaattgtagctctctcaagaatgaattcaaaggtctcatttgtcaggcctgtctttgttctgtttgtttcatctgtatgaaatttgtctcatgaagcataggaaactgtggcattgcccacgattctactcagaatgaataatgtcacctctg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0616500, RefSeq:Os01g0616500