Os01g0616600

From RiceWiki
Revision as of 04:49, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0616600| Description = Protein prenyltransferase domain containing protein| Version = NM_001050114.1 GI:115438597 GeneID:4326654| Length = ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0616600

Description

Protein prenyltransferase domain containing protein

Version

NM_001050114.1 GI:115438597 GeneID:4326654

Length

1389 bp

Definition

Oryza sativa Japonica Group Os01g0616600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:26141361..26142749

Sequence Coding Region

26141395..26142531

Expression

GEO Profiles:Os01g0616600

Genome Context

<gbrowseImage1> name=NC_008394:26141361..26142749 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:26141361..26142749 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaccgccgccgtcttctccgcctcggcccgccgcctcctctccaccgtcgccggcggcgccggggccggatccgccgccgagctccccgtcttgattggccacctccgcagcctcgcccgcgcgggccgcctcgccgacatcgacgccgccctcgcgccgcacctggcgtcccactccgtcgcggcggtctccgccctctcctcggtgggcctccccgaccgcgcctccgcgctcctcgccaccatccggaacccaaccgccgcgcacctcaacgcgctcctggccccgctcctccgccgccaccgcctcgtgggcctcatccccaccctcctcgcggcgcacccctccgtcccgcgcgacgacgccacggagggcatccacgccaaggccctctgcatcgccaccggcgccgactccgcgctccacctcctccagcgggagtcgccgccgccgtccctccagctcttcaccagcgtcatcgactcctactataagcagcgcaagccccaccgcgccgagcagctgtggcgcgagatggtcgaggaccacggcatcgtccccgacgccgccgcccacaacgtcaggatcacctacaaggccgccaccggcacggtggaggaggtcaaggagctgatccgcgccatgcgcgaggatgccggcctccagccggacatcgtctcccacaacgggctgatgcgcgcgatggcgcggcacgggagggtggacgagatgatggaggtgtacaagaggctggagaagggtagcgcctccgccgcggcggagggcaagtcggcgccggactgcgcgacgtacacctgcgtggtggccgcgctgtgcaaggcggggcggtggtcggaggcggacgacgtgttctacgaggcggtgaagcggaggaagctggccgacctcgggacggcgcgcgttctggtgcgaggcctcaaggaggccggcaaggggcgggcggcgaggcgggtggtgatcgggctgcgcaagaagttccccgaccgcttcgacggcccgtggaaggatctcgaggagttggccgggatcgccggcgaggatgaggagagcgatgtcgaaggggaggacgacgagcagccgccggcgacgacgacgaccactgccgcgtga</cdnaseq>

Protein Sequence

<aaseq>MATAAVFSASARRLLSTVAGGAGAGSAAELPVLIGHLRSLARAG RLADIDAALAPHLASHSVAAVSALSSVGLPDRASALLATIRNPTAAHLNALLAPLLRR HRLVGLIPTLLAAHPSVPRDDATEGIHAKALCIATGADSALHLLQRESPPPSLQLFTS VIDSYYKQRKPHRAEQLWREMVEDHGIVPDAAAHNVRITYKAATGTVEEVKELIRAMR EDAGLQPDIVSHNGLMRAMARHGRVDEMMEVYKRLEKGSASAAAEGKSAPDCATYTCV VAALCKAGRWSEADDVFYEAVKRRKLADLGTARVLVRGLKEAGKGRAARRVVIGLRKK FPDRFDGPWKDLEELAGIAGEDEESDVEGEDDEQPPATTTTTAA</aaseq>

Gene Sequence

<dnaseqindica>35..1171#agtaccaaaccagaggtcgatccggttcccagccatggccaccgccgccgtcttctccgcctcggcccgccgcctcctctccaccgtcgccggcggcgccggggccggatccgccgccgagctccccgtcttgattggccacctccgcagcctcgcccgcgcgggccgcctcgccgacatcgacgccgccctcgcgccgcacctggcgtcccactccgtcgcggcggtctccgccctctcctcggtgggcctccccgaccgcgcctccgcgctcctcgccaccatccggaacccaaccgccgcgcacctcaacgcgctcctggccccgctcctccgccgccaccgcctcgtgggcctcatccccaccctcctcgcggcgcacccctccgtcccgcgcgacgacgccacggagggcatccacgccaaggccctctgcatcgccaccggcgccgactccgcgctccacctcctccagcgggagtcgccgccgccgtccctccagctcttcaccagcgtcatcgactcctactataagcagcgcaagccccaccgcgccgagcagctgtggcgcgagatggtcgaggaccacggcatcgtccccgacgccgccgcccacaacgtcaggatcacctacaaggccgccaccggcacggtggaggaggtcaaggagctgatccgcgccatgcgcgaggatgccggcctccagccggacatcgtctcccacaacgggctgatgcgcgcgatggcgcggcacgggagggtggacgagatgatggaggtgtacaagaggctggagaagggtagcgcctccgccgcggcggagggcaagtcggcgccggactgcgcgacgtacacctgcgtggtggccgcgctgtgcaaggcggggcggtggtcggaggcggacgacgtgttctacgaggcggtgaagcggaggaagctggccgacctcgggacggcgcgcgttctggtgcgaggcctcaaggaggccggcaaggggcgggcggcgaggcgggtggtgatcgggctgcgcaagaagttccccgaccgcttcgacggcccgtggaaggatctcgaggagttggccgggatcgccggcgaggatgaggagagcgatgtcgaaggggaggacgacgagcagccgccggcgacgacgacgaccactgccgcgtgagctctcgcagtaatttggtcgtgttcgtggttttagcaaatttgcattcgtggtaatacgaagaccatataatggtttaggattttagggctggatcaataagaagcaaattctgaggatgcgagaatcactcaaattttgtcaaactagcttcttgaatcacaccataaaacttctttaatgtgatgtctcgttgtaatgattgatcttgtttctac</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0616600, RefSeq:Os01g0616600