Os01g0618100

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Revision as of 04:49, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0618100| Description = Similar to IN2-2 protein| Version = NM_001050123.1 GI:115438616 GeneID:4326612| Length = 2429 bp| Definition = Oryz...")
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Gene Name

Os01g0618100

Description

Similar to IN2-2 protein

Version

NM_001050123.1 GI:115438616 GeneID:4326612

Length

2429 bp

Definition

Oryza sativa Japonica Group Os01g0618100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:26236493..26238921

Sequence Coding Region

26236681..26236856,26237456..26237609,26237699..26237795,26237877..26238049,26238161..26238364
,26238460..26238627,26238757..26238819

Expression

GEO Profiles:Os01g0618100

Genome Context

<gbrowseImage1> name=NC_008394:26236493..26238921 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:26236493..26238921 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggagcaagctccactggcgccgatgcctcgagtcaagctcggcacccggggcctagaggtgtccaagctggggttcgggtgcatggggctcacgggcgcgtacaactcgccgctcgacgacgacgccggcgccgccgtcatcgcgcacgccttccgccgcggcgtcaccttcttcgacacctccgacgtctacggccccctcgccaacgagatcctcctcggcaaggcgctgaagcagctgccgcgggagcaggtgcaggtggccaccaagttcgggattcggcggggcgccgacggcgtgcgcgccgtgtgcggccggccggagtacgtgcgcgcctgctgcgaggccagcctcggccgcctcggcgtcgactacatcgacctctactaccagcaccgcgtcgacaccaccatccccatcgaggacacgattggtgagctcaagaaattggtggaggaggggaaggtgaggtacattgggctatcggaggcgagccctgacaccatcaggcgagctcatgccgtgcacccaatcactgcagttcagatggagtggtctctctgggctcgtgacattgaacccgaaattgtgccgctctgcagggagttgggcattggaattgttccctacagccctatcgcccgcgggtttttcggagggagaggagtgacagaacaattgtctgctgaatctaatttgcaaggacatccacgattttctgctgaaaatttggagaagaataaacagctttatctgaaaacggaagagctggccaagaagcaccagtgcagccctgctcagctagctttagcttgggttcttcatcaaggggatgatgtggtcccaataccaggaacaaccaagataaaaaacctagatgccaacattgactccttaaaggtgaacctcacggatgatgacctgaaagagatctctagccaggtacgcgaagaagatgtcgctggtggaagacagtatacctcatttgcacattacacctggaagtatgctgacacgccaaagaagtaa</cdnaseq>

Protein Sequence

<aaseq>MAEQAPLAPMPRVKLGTRGLEVSKLGFGCMGLTGAYNSPLDDDA GAAVIAHAFRRGVTFFDTSDVYGPLANEILLGKALKQLPREQVQVATKFGIRRGADGV RAVCGRPEYVRACCEASLGRLGVDYIDLYYQHRVDTTIPIEDTIGELKKLVEEGKVRY IGLSEASPDTIRRAHAVHPITAVQMEWSLWARDIEPEIVPLCRELGIGIVPYSPIARG FFGGRGVTEQLSAESNLQGHPRFSAENLEKNKQLYLKTEELAKKHQCSPAQLALAWVL HQGDDVVPIPGTTKIKNLDANIDSLKVNLTDDDLKEISSQVREEDVAGGRQYTSFAHY TWKYADTPKK</aaseq>

Gene Sequence

<dnaseqindica>2066..2241#1313..1466#1127..1223#873..1045#558..761#295..462#103..165#ggagaacagaacaaaggtggagactgcgattcacttccactcccttccccactgccttcctcctctcactctcactccccctgcgaccgccgccgagaggccatggcggagcaagctccactggcgccgatgcctcgagtcaagctcggcacccggggcctagaggtgaacatgcccgcttgctcgatcgtcaattcctacttccccgtatttccgttcgttcggtttgcgctgaatcggccagtgacagtgagtgtgaatcgatggatgttgaattcgacgaccttgctgtaggtgtccaagctggggttcgggtgcatggggctcacgggcgcgtacaactcgccgctcgacgacgacgccggcgccgccgtcatcgcgcacgccttccgccgcggcgtcaccttcttcgacacctccgacgtctacggccccctcgccaacgagatcctcctcggcaaggtctggtcggggcccttcccttccttcatcgttcgtggtttcttgtggttggattggatgatgatgagctaaccccatcgccttcggatttccaggcgctgaagcagctgccgcgggagcaggtgcaggtggccaccaagttcgggattcggcggggcgccgacggcgtgcgcgccgtgtgcggccggccggagtacgtgcgcgcctgctgcgaggccagcctcggccgcctcggcgtcgactacatcgacctctactaccagcaccgcgtcgacaccaccatccccatcgaggacacggtctcttgctccacctcgccccctttcttgatttctttcttcagttctttacccttcctcacacacaccttgtaaattcttgtattgccattcgggttggtgctgaactagattggtgagctcaagaaattggtggaggaggggaaggtgaggtacattgggctatcggaggcgagccctgacaccatcaggcgagctcatgccgtgcacccaatcactgcagttcagatggagtggtctctctgggctcgtgacattgaacccgaaattgtgccgctctgcaggtgaattccgcatcgcaggttttactaatgattgattgctcatgcaagtaaactcatcgcaatccatggactccattccagggagttgggcattggaattgttccctacagccctatcgcccgcgggtttttcggagggagaggagtgacagaacaattgtctgctgaatctaatttggtacactctactctaagtgccattccttgatctgcagcatacaattactttcagttacttaggtatgaactttgttttattctttccagcaaggacatccacgattttctgctgaaaatttggagaagaataaacagctttatctgaaaacggaagagctggccaagaagcaccagtgcagccctgctcagctagctttagcttgggttcttcatcaaggggatgatgtggtcccaataccaggtgagtgctataaccccgtcctgatgtaactgatagtgcacaatgcagatctatatggccaatgctttctcccttttcttttttaccttgagataaagggattgatggatattcaaatctctttccttgttagtgaaatgtgtagttctgacaatagagcaagatacacaaagagataatataatcggataagcatgtagtttaattgtgaatttgtgatagtgttttgttcggggaaaaaaaacatggctgcgaagcatttcatggtaacattgaggtttcaattgtgatatacttgtagtagtttatttggttgtaaaacaaaggagaaacacccctcttttgcctcacagtttgtgctacatgatgttaacttcaaacttgtagtgatgcatctttttttactaatctatagcccaaaaaaaattgtggctccaaaaaatggtatgattctacaatattgttcctcttaatgcttgttgttaccttcaactcttcaagtcccaagcacggacataagcagcaaagctcgttgtttgtatgctctaatatgccgtgattgatccatcactgagaaacaattcgttacattttctcaggaacaaccaagataaaaaacctagatgccaacattgactccttaaaggtgaacctcacggatgatgacctgaaagagatctctagccaggtacgcgaagaagatgtcgctggtggaagacagtatacctcatttgcacattacacctggaagtatgctgacacgccaaagaagtaaagctaaaaaaatattagtatatcaaagatattgcctgattgctattctccctgcgtatgtgctggatggtgttaaatgtatgccttgtgaatgctctctgcggttctaataatgtactgccaataacaaattactgcacttccactcgcctttgagagcttcacgaaacatataaaacttgcttaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0618100, RefSeq:Os01g0618100