Os01g0621600

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Revision as of 04:49, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0621600| Description = Protein of unknown function DUF1221 domain containing protein| Version = NM_001050140.1 GI:115438650 GeneID:4326630| ...")
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Gene Name

Os01g0621600

Description

Protein of unknown function DUF1221 domain containing protein

Version

NM_001050140.1 GI:115438650 GeneID:4326630

Length

3545 bp

Definition

Oryza sativa Japonica Group Os01g0621600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:26441455..26444999

Sequence Coding Region

26441687..26441835,26442250..26444188

Expression

GEO Profiles:Os01g0621600

Genome Context

<gbrowseImage1> name=NC_008394:26441455..26444999 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:26441455..26444999 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcagctccggcaactcggcgaggcggtgggtagcatcaacgcgctcatggcgttcgaggacgacctccacatcaacccgcggcagtgccgcctcctcgccgacgcctgcgcgcgcgcgctcgccgccgtcacggggcaggttcgcgcccagctccgcttcgacgagcgcggcgccaagtggcgcgccatcgaggcgccgctccgcgagctccaccgcgccttccgcgacgccgaggcgtacgtcaggcagtgcctggacccccgcggcagctggtgggcgcgcgccgcggccatggcgcacggcaccgagtgcgtggagcagcacctccacaatgtcctgtggtgcgtcgccgtcgcgctcgaggccatcgacgccgccggcgagatcgccggctccgacccggacgagctcgccagggggcggctggtgctcgccaggaagtacgacagggacatgctcgatcccaagctgttcgagcacgcgttcggcaagctatatctggtctcccaagagctcgttgcaaggatggacatggcgtggaaggaggacagatgggtgatatcgcaaatgttcgacgaaatgaaaggccctgcggcgtcgaaacctctgagcaaaaacgagcaccgcctcgccgagctcctcgccgcggcgatggggaagctgcacccggcatctgtccttcttggcagcgactacagcgtccggaggcggctcggcggccggctcaaggaggtgcattggatgggggagagctttgcgatgaagcatttcatcggggacaccgatgccgccggcgccgaggtcgcgctcctgtgttcggtggcgcacccgaacgtcgcgcacgccgcgtactgcttccacgacgaggagaagaaagagtacttcgtggtcatggaccagctcatggccaaggacctcgggagctacgtcaaggaggtgagctgcccgcggcggcggatcccgttcccgctcgtcgtcgccgtcgacattatgctgcagatcgcgcgcgggatggagtatctgcacgcgaagaggataaaccacggcgagctgaacccttccaacgtgctcgtcaagccgcgccaacccgatggcggctacgtgcatgtcaaggtcgccggatatgggcagccagctggcatcacagccggcggcgcaaaagcttccgccaatggcaacgccaacggcaacgacaactcctgcatctggtacgcgccggaggtgctcaggtccgacggcgtcgcggacgccgcggcggcggggaggtgcaccgagaaggccgacgtgtacagcttcgccatgatctgcttcgagctgctgaccggcaaggtgccgttcgaggacaaccacctgcagggcgacaagacgagcaagaacatctgcgccggcgagcggccgctgttcccgttccaggcgcccaagtacctcaccgcgctgacgaagcggtgctggcacgccgacccggcgcagcggctggcgttcgcctccatctgccgcgtcctccggtacgtcaagcggttcctgatcctgaacccggagcagcagcagcagcagcagcagggccagaccgacgacgcgcccaagccggccgtcgactacctcgacatcgaggcgcagctgctgaagaagctcccggcgtggcagcgtggcggcgaggcgccgcgcgtcgccgacgtgccgttccagatgttcgcgtacagggtcatggagagggagaaggccgccggcgccgtgcacgtcgccaaggacagggcctcggattcgggcagcgacgggaactcgctgtacggcgacgagaacgggttcggtgcaatgtcgccggagcacaccttctccgccgtgtcgaacggcaccctgcggtcgcggccggccagcagcgacggcaggttgccgacggccaagaaggcggacggcaaggcgcccaggcaagcagggccacagccgaaggtgaaacccgtgaacacggcggcgaggactccgcactcggcaaggcgggcgctcggcgtgaagcccgacgatcacctccagaccaacggcgctcccaccgcccgccggaggacgcccgagatggcctcagaatag</cdnaseq>

Protein Sequence

<aaseq>MEQLRQLGEAVGSINALMAFEDDLHINPRQCRLLADACARALAA VTGQVRAQLRFDERGAKWRAIEAPLRELHRAFRDAEAYVRQCLDPRGSWWARAAAMAH GTECVEQHLHNVLWCVAVALEAIDAAGEIAGSDPDELARGRLVLARKYDRDMLDPKLF EHAFGKLYLVSQELVARMDMAWKEDRWVISQMFDEMKGPAASKPLSKNEHRLAELLAA AMGKLHPASVLLGSDYSVRRRLGGRLKEVHWMGESFAMKHFIGDTDAAGAEVALLCSV AHPNVAHAAYCFHDEEKKEYFVVMDQLMAKDLGSYVKEVSCPRRRIPFPLVVAVDIML QIARGMEYLHAKRINHGELNPSNVLVKPRQPDGGYVHVKVAGYGQPAGITAGGAKASA NGNANGNDNSCIWYAPEVLRSDGVADAAAAGRCTEKADVYSFAMICFELLTGKVPFED NHLQGDKTSKNICAGERPLFPFQAPKYLTALTKRCWHADPAQRLAFASICRVLRYVKR FLILNPEQQQQQQQGQTDDAPKPAVDYLDIEAQLLKKLPAWQRGGEAPRVADVPFQMF AYRVMEREKAAGAVHVAKDRASDSGSDGNSLYGDENGFGAMSPEHTFSAVSNGTLRSR PASSDGRLPTAKKADGKAPRQAGPQPKVKPVNTAARTPHSARRALGVKPDDHLQTNGA PTARRRTPEMASE</aaseq>

Gene Sequence

<dnaseqindica>3165..3313#812..2750#gtttcttctccttctcctcgtcggcatcctggtcatcgtcctccttttgctttggagactcctccccctttccttgttgtctctcttgcgggatctctacgtcagagctctcgcacctctctcttaagcttttcttctctggccgatccttgaagcaagacgccggtccatggtcggataaggatttcagactgctgccctggtgccgcgatcctacaagcttgtgtgagttatctttcagtggcatctttcatgtgcatgttttttttttaatcttctttgtttcgatttcatcttttggtttcttgtttcctacagtatgtttttttgtgtttgatggattgaatagttttttagtttatttcgttgaattatttggtgtttgaatatgttccgttcagatgaaaagtactgaattgtgcagtgttgatgaagttttgttttgctgattcgatgcttctcggttcacaccaaaatgttcctaaaatggttggaggctggaagaaacagatggaaacaacaactgtaaaatgttcagaaatgtataaaatttactttctgcatttattaccttatatttttggtgtcatcatcaaaccacaatcaagttcgtgttcatacgccgatcaaagcactttggatgaaaatttcgcacgtttgacatcagtttcttccctttttttttatccttgtcaggaaaggaattcaatccgtgccatccaaagaagcagaggaagaaagaagcaatcaagaagagcgcgcgcacttgatccatcgtcctatcggcaggcaaggctgatcgccgatagggatggagcagctccggcaactcggcgaggcggtgggtagcatcaacgcgctcatggcgttcgaggacgacctccacatcaacccgcggcagtgccgcctcctcgccgacgcctgcgcgcgcgcgctcgccgccgtcacggggcaggttcgcgcccagctccgcttcgacgagcgcggcgccaagtggcgcgccatcgaggcgccgctccgcgagctccaccgcgccttccgcgacgccgaggcgtacgtcaggcagtgcctggacccccgcggcagctggtgggcgcgcgccgcggccatggcgcacggcaccgagtgcgtggagcagcacctccacaatgtcctgtggtgcgtcgccgtcgcgctcgaggccatcgacgccgccggcgagatcgccggctccgacccggacgagctcgccagggggcggctggtgctcgccaggaagtacgacagggacatgctcgatcccaagctgttcgagcacgcgttcggcaagctatatctggtctcccaagagctcgttgcaaggatggacatggcgtggaaggaggacagatgggtgatatcgcaaatgttcgacgaaatgaaaggccctgcggcgtcgaaacctctgagcaaaaacgagcaccgcctcgccgagctcctcgccgcggcgatggggaagctgcacccggcatctgtccttcttggcagcgactacagcgtccggaggcggctcggcggccggctcaaggaggtgcattggatgggggagagctttgcgatgaagcatttcatcggggacaccgatgccgccggcgccgaggtcgcgctcctgtgttcggtggcgcacccgaacgtcgcgcacgccgcgtactgcttccacgacgaggagaagaaagagtacttcgtggtcatggaccagctcatggccaaggacctcgggagctacgtcaaggaggtgagctgcccgcggcggcggatcccgttcccgctcgtcgtcgccgtcgacattatgctgcagatcgcgcgcgggatggagtatctgcacgcgaagaggataaaccacggcgagctgaacccttccaacgtgctcgtcaagccgcgccaacccgatggcggctacgtgcatgtcaaggtcgccggatatgggcagccagctggcatcacagccggcggcgcaaaagcttccgccaatggcaacgccaacggcaacgacaactcctgcatctggtacgcgccggaggtgctcaggtccgacggcgtcgcggacgccgcggcggcggggaggtgcaccgagaaggccgacgtgtacagcttcgccatgatctgcttcgagctgctgaccggcaaggtgccgttcgaggacaaccacctgcagggcgacaagacgagcaagaacatctgcgccggcgagcggccgctgttcccgttccaggcgcccaagtacctcaccgcgctgacgaagcggtgctggcacgccgacccggcgcagcggctggcgttcgcctccatctgccgcgtcctccggtacgtcaagcggttcctgatcctgaacccggagcagcagcagcagcagcagcagggccagaccgacgacgcgcccaagccggccgtcgactacctcgacatcgaggcgcagctgctgaagaagctcccggcgtggcagcgtggcggcgaggcgccgcgcgtcgccgacgtgccgttccagatgttcgcgtacagggtcatggagagggagaaggccgccggcgccgtgcacgtcgccaaggacagggcctcggattcgggcagcgacgggaactcgctgtacggcgacgagaacgggttcggtgcaatgtcgccggagcacaccttctccgccgtgtcgaacggcaccctgcggtcgcggccggccagcagcgacggcaggttgccgacggccaagaaggcggacggcaaggcgcccaggcaagcaggtatttatcctaccacattttttaaatctcattccatgaactgcaaatagaattcattggaacgtatgattttcagctgaaaatccataaaatttatacagttttcctgtagaacatcaaatggaatgcatgcattgtttggtaagatggcgtatgatatgatggatggccgtacccaaaaagtgattcggataatctgatttatggtacagccgttccgatgtttcttgcacaccagcatctacatatctgatttgccattttgccatcgttggagtagctatcaccgtaccagaaagcacttcactttgcaagaacctttagatcattcacaatttcacatcatttcgcatcgatatcatagctagcgcaatcaagcgagatgataaattgggctgatactttcgcttgcagggccacagccgaaggtgaaacccgtgaacacggcggcgaggactccgcactcggcaaggcgggcgctcggcgtgaagcccgacgatcacctccagaccaacggcgctcccaccgcccgccggaggacgcccgagatggcctcagaatagcagcgcaagctgctctcgtgttcgtgttcgtgatcgagtttaatgggtagaacgcgttcgatggagacggttctttcctctttccttccgtagcacagcgtctttttgccaggggaacccgaacctgcaggggcatatcaatggaggttttgcacgctactcatttgcgtggaacgaaatcccacgtgttaggaatccttgtggattgaaaatgaacgggtttttttcatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0621600, RefSeq:Os01g0621600