Os01g0622700

From RiceWiki
Revision as of 04:49, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0622700| Description = Conserved hypothetical protein| Version = NM_001050148.1 GI:115438666 GeneID:4326639| Length = 3063 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0622700

Description

Conserved hypothetical protein

Version

NM_001050148.1 GI:115438666 GeneID:4326639

Length

3063 bp

Definition

Oryza sativa Japonica Group Os01g0622700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:26500616..26503678

Sequence Coding Region

26500907..26501062,26501211..26501299,26501461..26501498,26501591..26501663,26501741..26501824
,26501913..26502012,26502090..26502240,26502880..26502962,26503093..26503239

Expression

GEO Profiles:Os01g0622700

Genome Context

<gbrowseImage1> name=NC_008394:26500616..26503678 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:26500616..26503678 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagcagcagcaggcgtgggcggcggggcttggcggcctcgcggtcgccggggtcggggaggagggcggcgggggaggtcccgctcccaccaccgtcgacgaggcgtccatggagcggagcaagagcttcgtcaaggcgctccaggagctcaagaacctgcggccgcagctctactcggcgtcggagtactgcgagaagtcgtacctccacagcgagcagaagcagatggttctagacaacttgaaggattatgctgtgagggctttggtgaatgcggttgaccaccttggcacagttgcctacaaactgacagacctgtatgaacaacaggcttcagaagtttccactcttgagctgaaagtagcatgcttgaaccagcaagtcctcacctgccaaacttacacggataaagaaggcattaggcagcagcagatgaccggaaccgccacaagacatcacaaacattacattgtaccgactttggcgaacaaaagaatgcaggctttctctgagatgcaaactgatgctgatattgactcaaggcctagaccttatccctcagcaaaaacccttttctggcatttggcttcagagaaaaactccaaaaccaatggagcacgccaatctgaatttgtcctagaagaaacaaaggctacaaaacctgcatcgagaggtaaggaaccatcaacatctccattgcccaagcatctgcagacaaacttggccagctctgattttgctatgcataatgttggcatgaaggatcaacctggtgtcaggcatctatcgtcatttagttcttttgacaacccaagagggcgtcaaatccaaaaggctcccctccgtaccaaaagtatgctagctgctttctttgtcaagcacaagtcgggaaagatgaaaaacgtttctgttcgttga</cdnaseq>

Protein Sequence

<aaseq>MQQQQAWAAGLGGLAVAGVGEEGGGGGPAPTTVDEASMERSKSF VKALQELKNLRPQLYSASEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAY KLTDLYEQQASEVSTLELKVACLNQQVLTCQTYTDKEGIRQQQMTGTATRHHKHYIVP TLANKRMQAFSEMQTDADIDSRPRPYPSAKTLFWHLASEKNSKTNGARQSEFVLEETK ATKPASRGKEPSTSPLPKHLQTNLASSDFAMHNVGMKDQPGVRHLSSFSSFDNPRGRQ IQKAPLRTKSMLAAFFVKHKSGKMKNVSVR</aaseq>

Gene Sequence

<dnaseqindica>2617..2772#2380..2468#2181..2218#2016..2088#1855..1938#1667..1766#1439..1589#717..799#440..586#accggcagagaaccgaaccacgcaagctagctggtcgatcgatccatccatcgacaggcggaaaaggaggcaatcgattccctaatctcgctaccgccatccgccaagcgaagcgaagcgaagcattgactcctactcctactacgagcggcttaaagtgaccagtaaccaccaccaccacgccgcggccgccgtcgccatccgcgcgcgcccccacctgcctccgctcccactcgcgcacgcggccaccacccccaccgatacgcttctcctgcctgcctgcctgctgctgctgccgcgcgccggcagggagaggagaggaggaggagcatcgcttccttgcttcctcctcacgtgccttgcccccgccgctaagtagccggcttcctaccgaacaagaactgcagcgagcgactcgggaggaggaaggcgaggggatatgcagcagcagcaggcgtgggcggcggggcttggcggcctcgcggtcgccggggtcggggaggagggcggcgggggaggtcccgctcccaccaccgtcgacgaggcgtccatggagcggagcaagagcttcgtcaaggcgctccaggtaggcctgccggccggccggggacccggatccgggagagatcccgcggcgccgcgaggctcgttttttttttctttctctgaaatgaattgcagttcttgattcttttggttgaactgatgtcgcgcaggagctcaagaacctgcggccgcagctctactcggcgtcggagtactgcgagaagtcgtacctccacagcgagcagaagcagatgtgagtttttttttttgttttcgttttcgtttctactgcgattcgaatcccagctctagcaggcaaaatttgtggcaagaatttgtgcgtgtgggcaaattattggttgcttgatgctactatgggaccatgaacttgtttatgattgctctatccacatagtttctcgtttggtgctagaaaggttgcggttggtgtgtagtaggtttaaatggtgaatcagttcagagttagctgagcatatacaaatagcagaaatggatgaggaaattacttgtgaactagaaacttgggccacatttgcgagttggaacacagggaccttaaataattcttgcgaaatctgaatttttttttttgcatgcgaaattcctgcattcataacgatcccttaccgagacactggtagataattaatcttggtgcagcatagggtctggaaatgttgagtttacttgcaataatccatccgttgtttatttcagtctactttgtactaagttctgatatcctcactgcatatcacttgctgtcaaatggttgtgttcattttctgcatctggctgctaggatttgagtacacgaaaatgtgacaatcattgggagtctgatctgatttcatatgcttatttatgtcagggttctagacaacttgaaggattatgctgtgagggctttggtgaatgcggttgaccaccttggcacagttgcctacaaactgacagacctgtatgaacaacaggcttcagaagtttccactcttgagctgaaagtagcatgcttgaaccaggtactgctgtttaactcaggaatttgtgttgatgcagaccaggagttaaactgacattcttattgctcaatatctagcaagtcctcacctgccaaacttacacggataaagaaggcattaggcagcagcagatgaccggaaccgccacaagacatcacaaacattacattgtaccgagtaaggacgtgtaaaaaaagatgtaattctctactgaagaaactattagcacctaatttaacttgctattttttctctatgagctcagctttggcgaacaaaagaatgcaggctttctctgagatgcaaactgatgctgatattgactcaaggcctagaccttatccctcaggtgcaatttcttggcactcagcacacaattaaatcttgatataaagtacctgcactaaaatggttttttctcttcagcaaaaacccttttctggcatttggcttcagagaaaaactccaaaaccaatggagcacgccaatctgaatttgtgtaagcatgccagctctattttgcctattgtgaagttggtcgcttactctatgattcttcctgtgtaattctgttgtctctatttttttcagcctagaagaaacaaaggctacaaaacctgcatcgagaggttttccaccattctatttaattgcttttattgcttagtacaccccagtagtgtgatttactttcatgattggcactgagtgtatcttaggcagacttctggatagtttataatatttgtacaggtggctaacacctcatttggaattgcttttgtttcaggtaaggaaccatcaacatctccattgcccaagcatctgcagacaaacttggccagctctgattttgctatgcataatgttggcatgaaggtaaacaacttgatgagtggtttaagacctgactatttttatgctgtaaaacttgcaaatgagcattacattctctaggaattcttaattttccaggttcaaattatcatttcccactaatgtgaaatcacatgttctgtatttgcaggatcaacctggtgtcaggcatctatcgtcatttagttcttttgacaacccaagagggcgtcaaatccaaaaggctcccctccgtaccaaaagtatgctagctgctttctttgtcaagcacaagtcgggaaagatgaaaaacgtttctgttcgttgatcaatttcaagcctccagtttgtccagccctgtcacaacgaagtacaaccacggaattcagattacatctacaatatgtctgtgtcttgtatattagtgctctagagatgaatcttttggataaagtttttatatcttaatgttaatgtcatctttctgatgacttaaatgtttaatatatgggtatagaataacagttttcagtataagtggatgtaaaaggagtatgtcaaccatcattttcattcatgtagattgtatgatgtgtttgtacagaagaaaaaaaaagcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0622700, RefSeq:Os01g0622700