Os01g0623200

From RiceWiki
Revision as of 04:49, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0623200| Description = C4-dicarboxylate transporter/malic acid transport protein family protein| Version = NM_001050150.2 GI:297597223 GeneI...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0623200

Description

C4-dicarboxylate transporter/malic acid transport protein family protein

Version

NM_001050150.2 GI:297597223 GeneID:4326677

Length

2595 bp

Definition

Oryza sativa Japonica Group Os01g0623200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:26518543..26521137

Sequence Coding Region

26519204..26520784

Expression

GEO Profiles:Os01g0623200

Genome Context

<gbrowseImage1> name=NC_008394:26518543..26521137 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:26518543..26521137 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagttcggcaacgacgtccggatcagaatggacggtggtgtgtacggggagagcgagcaatcgtccggggaagccgctctcccgcggctgctgatcgaggtcccctcgcaggtcatcgacggcttcgactgcgtcggcggcggtggcgacgccacggccacggccacgctcagcgagcagagcaaggaactcgaaatgctgggcgaggagaaggacgtcgtgattagcatcccggcgccggtgtacgctccacgatccgtgtcggtgtcggcggcgtacgaacacgagggcgcgcagataccgtactccgtgtcgctgagcatgccggcgtcgccatcggggttccacttctcgcagttcgggatggcggcggcgaaggcgaaggccgtccaccgcgacgaggcccgcgtggcgccggcggagaccaggttcgacgacgcgcacccgccggcggtggggcgagtgcaggcgcactccccgcggctgctgctgaatcagacgcggttccactcgcagcccatcctgcacctgtccaagaacgacgagacgacgcggcggtgcgacagcacgcgcgacaagcggttcgaccagttcaagaccttctccggccgcctcgagcggcagctctccaccctgcgcggccggccggcgcaggagcacatgaccaacggcgagggcgcccccgagccgaacatcgccgaggaggagacggagcaggtccccggcgccgaccgctacttcgacgccctggagggccccgagctggagacgctgagggcgacggagacgacggtgctgcccaaggacgagaagtggccgttcctgctgcggttcccgatcagcgcgttcgggatgtgcctcggggtgagcagccaggcgatgctgtggaagacgctggcgtcggcgccgccgacgtcgttcctgcacgtcagcccggtggtgaaccacgtgctgtggtggatctcgctggcgctgatggggttcgtctccttcatctacctgctcaaggtcgttttctacttcgaggcggtgcggcgggagttctaccacccgatccgcgccaacttcttcttcgcgccgtggatcgcctgcctcttcctcgtccagggcgtgccgcggccggtgacggaggtgcaccacggcgtctggtacgcgctcatggcgcccatcttctgcctggagctcaagatctacgggcagtggatgtccggcggccagcggcggctgtccaaggtggcgaacccgtccaaccacctctccatcgtcggaaacttcgtcggcgcgctgctcggcgccaagatggggctccgcgagggccccatcttctacttcgccgtcggcctcgcccactacatggtcctcttcgtcacgctctaccagcgcctccccaccaatgtcaccctccccaaggagctccaccccgtcttcttcctcttcgtcgccgcccccagcgtcgcctccatggcctgggccaagatcctcggcgagttcgactacggcgcccgcatcgcctacttcatcgccctcttcctctacatgtcactggtacgtaacacttacgtgcaacgagcacactag</cdnaseq>

Protein Sequence

<aaseq>MEFGNDVRIRMDGGVYGESEQSSGEAALPRLLIEVPSQVIDGFD CVGGGGDATATATLSEQSKELEMLGEEKDVVISIPAPVYAPRSVSVSAAYEHEGAQIP YSVSLSMPASPSGFHFSQFGMAAAKAKAVHRDEARVAPAETRFDDAHPPAVGRVQAHS PRLLLNQTRFHSQPILHLSKNDETTRRCDSTRDKRFDQFKTFSGRLERQLSTLRGRPA QEHMTNGEGAPEPNIAEEETEQVPGADRYFDALEGPELETLRATETTVLPKDEKWPFL LRFPISAFGMCLGVSSQAMLWKTLASAPPTSFLHVSPVVNHVLWWISLALMGFVSFIY LLKVVFYFEAVRREFYHPIRANFFFAPWIACLFLVQGVPRPVTEVHHGVWYALMAPIF CLELKIYGQWMSGGQRRLSKVANPSNHLSIVGNFVGALLGAKMGLREGPIFYFAVGLA HYMVLFVTLYQRLPTNVTLPKELHPVFFLFVAAPSVASMAWAKILGEFDYGARIAYFI ALFLYMSLVRNTYVQRAH</aaseq>

Gene Sequence

<dnaseqindica>354..1934#gagccaaaatcgagcccgaaactccggaagcgtacgggagaaaaacttgttgtttgcgtttagcgagctgtgaactgttttgatggtgcatgctgaacgcgtgtagagaagtagagagaaatccaggtaagattaactgtaggtaggataggttgatatggccaggatcgccatacgggaatgcccacccgtgcttcggccgaattggcgtgtgatctggtactgcggtacttgatgattacgttcttgagaaattattaaaactttgcttttttttttgttgctttacttgggagattgatcgctaaacgagtcaatctgtcgttgtatggtgtgcaggtttcgtgaacggtatggagttcggcaacgacgtccggatcagaatggacggtggtgtgtacggggagagcgagcaatcgtccggggaagccgctctcccgcggctgctgatcgaggtcccctcgcaggtcatcgacggcttcgactgcgtcggcggcggtggcgacgccacggccacggccacgctcagcgagcagagcaaggaactcgaaatgctgggcgaggagaaggacgtcgtgattagcatcccggcgccggtgtacgctccacgatccgtgtcggtgtcggcggcgtacgaacacgagggcgcgcagataccgtactccgtgtcgctgagcatgccggcgtcgccatcggggttccacttctcgcagttcgggatggcggcggcgaaggcgaaggccgtccaccgcgacgaggcccgcgtggcgccggcggagaccaggttcgacgacgcgcacccgccggcggtggggcgagtgcaggcgcactccccgcggctgctgctgaatcagacgcggttccactcgcagcccatcctgcacctgtccaagaacgacgagacgacgcggcggtgcgacagcacgcgcgacaagcggttcgaccagttcaagaccttctccggccgcctcgagcggcagctctccaccctgcgcggccggccggcgcaggagcacatgaccaacggcgagggcgcccccgagccgaacatcgccgaggaggagacggagcaggtccccggcgccgaccgctacttcgacgccctggagggccccgagctggagacgctgagggcgacggagacgacggtgctgcccaaggacgagaagtggccgttcctgctgcggttcccgatcagcgcgttcgggatgtgcctcggggtgagcagccaggcgatgctgtggaagacgctggcgtcggcgccgccgacgtcgttcctgcacgtcagcccggtggtgaaccacgtgctgtggtggatctcgctggcgctgatggggttcgtctccttcatctacctgctcaaggtcgttttctacttcgaggcggtgcggcgggagttctaccacccgatccgcgccaacttcttcttcgcgccgtggatcgcctgcctcttcctcgtccagggcgtgccgcggccggtgacggaggtgcaccacggcgtctggtacgcgctcatggcgcccatcttctgcctggagctcaagatctacgggcagtggatgtccggcggccagcggcggctgtccaaggtggcgaacccgtccaaccacctctccatcgtcggaaacttcgtcggcgcgctgctcggcgccaagatggggctccgcgagggccccatcttctacttcgccgtcggcctcgcccactacatggtcctcttcgtcacgctctaccagcgcctccccaccaatgtcaccctccccaaggagctccaccccgtcttcttcctcttcgtcgccgcccccagcgtcgcctccatggcctgggccaagatcctcggcgagttcgactacggcgcccgcatcgcctacttcatcgccctcttcctctacatgtcactggtacgtaacacttacgtgcaacgagcacactagctactacagtacgtaattaattagtattactaagctctgcatgcgtacttaacaatgtcttaatcctgtgaccaggctgtgaggatcaacttcttcaggggattccgattctcgctggcgtggtgggcgtacacgttcccgatgaccggcgcggcgatcgcgacgatcacgtacgcgacggaggtgaccaacgtgctgacgagggcgctctccatcggcctctccggcatcgccaccgtcaccgtcgccggcctgctggtcaccaccatgttccacgccttcgtgctcaaggacctcttccccaacgacgtctccatcgccatcacccgcaagaagcccaagttcagcaagatcctcgcgcacttccgctcatccagctccgacatgaaggagtatgtgctctccatctccaagccgcccagctccgactccgactcgtcggtgtcgtccaaggccaccaccgtgaccgatccgtcggtgaccagagtcaaggcggagccctaaatcgaccccaagtatagctatctcgtcgttagctgtacataaattctttaaattatgatgtcttgggacaaagatcatcgccttaatatggttggacattacgagtagttagtaatataatataatacgatcacatatagtataatatccttggagc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0623200, RefSeq:Os01g0623200