Os01g0631400

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Revision as of 04:50, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0631400| Description = Six-hairpin glycosidase domain containing protein| Version = NM_001050181.1 GI:115438732 GeneID:4326672| Length = 61...")
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Gene Name

Os01g0631400

Description

Six-hairpin glycosidase domain containing protein

Version

NM_001050181.1 GI:115438732 GeneID:4326672

Length

6141 bp

Definition

Oryza sativa Japonica Group Os01g0631400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:26913847..26919987

Sequence Coding Region

26914098..26914871,26919772..26919987

Expression

GEO Profiles:Os01g0631400

Genome Context

<gbrowseImage1> name=NC_008394:26913847..26919987 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:26913847..26919987 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgcttccaaccatcctccccaagatagccgcgcactggctcttcaccttctaccgcgcggcacgtaagctccgcggccatgcgttccagtactgccgcagctcctccgccactactaccaagccgcctccgccgtcgcccgtctcgccagcggccaagtgcaccgtcgtcttccccgacgccgccgacaaggccgtggtgttcggcttcgacggcgcgctcatgaggtccgcggcgctcttcccctacttcatgctcgtcgcctgcgagggcggcagcctgctgcgcgctctgctcctgctctgcgccttccctctcgtctgggcccttggcgagcgctccgacgccggcgtcagggtcatggcgttcgtcaccttcttcgggctgaggccccgcgacatggacctcgtggcccgcgccgtcctgcccaagttctacatggaggggctcaacgcgcaggtgtacagccgcctctggctgccggcgaggaggaaggtggtggtgacgggcgcgccgagggtgatggtggagtggttcttgaaggagtacatggccgccgacgtggtggtcggcggcgagctgcatgttgttagggttggtcgcggccgctacttcaccgggatgctgtgtgggccaggaggatcggcggcgccggcgctgaagcacaaggccctgcaggcagaggcgttgggaacggacaacgccatggctgacgtggccgtcgtcgggaacgccagccagctcgaccacccctgcttcccatactgcaaggaagtttacgtcgtgaacagggagagcaccaagaccgcgcggctgccgcgggacaggtacccgaagccgctcatcttccacgacggccgcctcgccttcctcccgaccccctccgccgcgctcgctttcttcctcttcctccccctcggcgtcatcctctccgtcatccgcatctccatcggcatcctgctcccctacaagatcagcttcggggcc</cdnaseq>

Protein Sequence

<aaseq>MVLPTILPKIAAHWLFTFYRAARKLRGHAFQYCRSSSATTTKPP PPSPVSPAAKCTVVFPDAADKAVVFGFDGALMRSAALFPYFMLVACEGGSLLRALLLL CAFPLVWALGERSDAGVRVMAFVTFFGLRPRDMDLVARAVLPKFYMEGLNAQVYSRLW LPARRKVVVTGAPRVMVEWFLKEYMAADVVVGGELHVVRVGRGRYFTGMLCGPGGSAA PALKHKALQAEALGTDNAMADVAVVGNASQLDHPCFPYCKEVYVVNRESTKTARLPRD RYPKPLIFHDGRLAFLPTPSAALAFFLFLPLGVILSVIRISIGILLPYKISFGA</aaseq>

Gene Sequence

<dnaseqindica>252..1025#5926..6141#ctgcaccaccctaccggccacttccactgccaatgccacagcttcctttcctggttcccgatccctccctcgtcatcaagccaactccatcgttccatcatcaccaacatttgcagcaacactgtgaacaagctctagttgcatcagctatacgtgctactactatataaaactggcgccccagcttatacaggttcgcacaggcaacatatacatacgtgcgtgacgacgtgtagtactacgtgagatcgatggtgcttccaaccatcctccccaagatagccgcgcactggctcttcaccttctaccgcgcggcacgtaagctccgcggccatgcgttccagtactgccgcagctcctccgccactactaccaagccgcctccgccgtcgcccgtctcgccagcggccaagtgcaccgtcgtcttccccgacgccgccgacaaggccgtggtgttcggcttcgacggcgcgctcatgaggtccgcggcgctcttcccctacttcatgctcgtcgcctgcgagggcggcagcctgctgcgcgctctgctcctgctctgcgccttccctctcgtctgggcccttggcgagcgctccgacgccggcgtcagggtcatggcgttcgtcaccttcttcgggctgaggccccgcgacatggacctcgtggcccgcgccgtcctgcccaagttctacatggaggggctcaacgcgcaggtgtacagccgcctctggctgccggcgaggaggaaggtggtggtgacgggcgcgccgagggtgatggtggagtggttcttgaaggagtacatggccgccgacgtggtggtcggcggcgagctgcatgttgttagggttggtcgcggccgctacttcaccgggatgctgtgtgggccaggaggatcggcggcgccggcgctgaagcacaaggccctgcaggcagaggcgttgggaacggacaacgccatggctgacgtggccgtcgtcgggaacgccagccagctcgaccacccctgcttcccatactgcaaggtgcgtccgtacgttgttttgttcttaacgatcatttaataggctttcctctagttaactatacatctcatgtcgctgtagatcagatcattagtactgttatatagctctaattgtttttggctttaaaatccatttcatactaggagtacatacatataacttccctttgaaaaaaaacaaaaaaagaaagacaacggtttgtgtcagagtatcaccttctcttcgggctggtacagaatatatatacgtaaacagctaatacttcaaaactaatatacacatgcacatacacacagaaagaaaaaactgatccgatatatggagctggtcatctgataaatcaaccgttggatcagaaacaaacggcctgatcgtaaaccgtaagatcttccctagcttagccgctacacacagagaacgcacgacataataaacaaacttcaggttaaccctgtttggcctttacggcatggtggatctacagagactagcacgttgcaccacgctataaaacctactacaaccacacccacttgtaggcataaatgtactagcagcagtagatgagacccgtccaatatgtggatcgaatcacctagaacagtgtactgctaccacatggatgagactcactgttggttcaggcagtttaccccaggcagggacctagaaagaactcgacaaacatgcacagacacctggccaatttgtggccaacttgccatgggcgcgcagggcatggacggcctggacgggaggacgggagaggcgcatgcatgcagatgcaggcagacagccgcacggtggtggtggcctctcgatccttcacacgccccagacgcgcgcgcgcgccattgaaagcgcatttacgcggtgtttggtgacatttaagcttgtgtttttccccctgtgcggcgctgtgctccgtagccgggcggccggctagagtgcgcgcgcgacatggccgtcgcatcgcggcaaagcgaggcgtcctctcgcgctgctttggcatttgctagttttgcacacctcgcctgctgcctttgctctgctctctctgggtcttctacagtaggcgtagtgccaatgcaactccactctcacgctagtacgttacgtcctccttgcattaacgcccgcagattaattaccttcgccgcgagcgtacaaatccaagtctccaactactactagtatcagtagaaagaaccgctccctgtctttatgggtcttaattatcttcgtctaaactgcacggccaaggtgcgtggcgagtaatggcttcgggtaggacgacgagtagctcgatccttttataactaccacgagtacaatacatatatagatggggcgtttatagtttggactacaatacgtatatatagaagagccgaggcgcaagtgcaacactgcagtgcgtaggacgtccaaaatgtgtggatggtatagatcccgaaaggagcccgtcagcccgtccgacaatagtgattaaagttcataaatgagatccctctacgcctacctctctatttccgatgaatactaggatagtactggtacagtgcctgacaaaggacgaaagttctactattaaggtctgatgtacggtggaaaaggtctgatgtttgaaaatggcgactgatatactttcaaacaattaagtactccattttcacatttttcagctgcctaaatgtagtactactacctccgttccaatatactccctccgtctaataaaaaaccaacctagtactaagatgtgctagaatatgtcgcatctggttctagattcgttttttatggaacggagggagtaagattgtgttcggcacccacttttccaaccccactctatcgttttccgcacgcacgtttttcaaactgctaaacggtgcgttttttgcaaaaagtttctatgcgaaagttgcttaaaaaatcaaattaatccatttttgaaaaaaaaagataatacttaattaatcacgcgctaatagaccgctccatttcccgtgcgtactgtatccggctgggaacgaggaaggacgaacacagcctaagtgcagttgtgagttttcgtgtccaacgtttgatcattcttcttggttaagaaaatatatgattagtatttttattgttattatatgataaacttgaatagtactttatgtgtgactatttctttttaatttttttataaaatttttaaatgaaatggacggtcaaatgttggacacggaaactcataacaacacttatattgggacggatatagtaataaattcatatccaatatttagaatagataatatttttgaaataaactgcaacataaatatgataatgcaacacatcataatctagtattttgaatgctaatcattattaaaattgatacaatattagtcagcaatatttaaaacagagtatttatctcatacacgtggataatgccttagactataagtataaaattacagactactttctctatgccatatagcgatttttgcggatcatttagggtagacgggccaaccttccgcacgcgaaaataggttttgggccatccggaaattaacaacccttttttactagtgatatatcgtactactctctcattgagaaatattacagtataagttgtgttaggtttttgcacagtttttaatataatatcaacaactacaaaagcaatagtattatatactcactctgttctaaattgatcatcacataataaaaaaaataaaatttttcaaattgatcgtcatataactttgatcccttcatttaacatgcagtattattgtatatgtgcatgcaaattgagtctacatgtttattgatccttacttatcacataataacattaaatgaaatacacaaaagttaagtctttcttctcgatgaaaaaacttatatgatgagattagataggaacttaactgagggtgtatgaaagtactttcagatacgaatgcatcgataccacttatatgacataaaacatatatgttgagtatttaattgttagtaaaaaaaattacaaaccttgactttctaaatacatgcatgccttaggccagtcacaatgggggtttcactggtgtgtcatgcacatttaataggggtaagactgaataaaaaatgattatttgcatgaaatggggatgagagagaaggaaagagtttcatcctggtgaaactcgtcagcgtcgtttccaagtcctcggtaacagagtgaaacccccgttgaggccgattcgtttcattcaccggatctcttgcgtccgcctccgccgtgcgacctccgcattctcccgcgccgcgccggattttgggtacaaatgatcccagcaacttgtatcaattaaatgctttgcttagtcttggaaacgtcaaagtgaaacccctccactgtggggattgtttcataaaagatttcatttgagagaagatggtataatattttgggtagccgtgcaatgacactagccattgtgactggccttatatttaagtccagaaaaaaaaagtactacgaaaaagacacctattgttgtaaatgtacagaaggagcattgaattgggccattaatggatctttcctctctattacaaaagttaggttacttcatatagggtgtgtttagttcataccaaaattgtaagtttagttgaaattggaacgatatgatgtaaaagttaaaagtttaaaagtaacctaactttatttaaatatatatgtggaacgatgtgttttaaatatatattttttatttaatttccataaattttatttaaaagtattgaatgaaaaagaaaaggacaattttgacagtaaattatgtgttcctatcaatcaaactgtataaaagtcatagcaatgctagaacgttgccaaaaaaaatgaacaccattaaatgatgatggcatcatgcatttacacacttcagagtctctgcgacagagctaagaatgccactggttgcgacagtatttgtgagaagtagtcaacaaacgccgtgtttagttacaaaataattctttaaactttcaactttttcatcacatcaaaactttactacacacacaaatttctaactttttcatcacgtcgttccaatttcaaccaaattttcaattttagtgtgaactaaacacagccaaaattaaatttcagtttgttgggagaattcagagagtaaattatactaggcttaaaggcaacacaacttatcttttgcacaataaaaatattctctcattttaattgtgatcatcagaacatttcgtcactgagtacggtcttcccaaaacaaaaattttcacgctgttgcatcgaatgtttaacacatgcatagagtattaaatgcagaaaaaaaacccaattacacaaattgcgtataaattacaagacgaatcttttaaatctaattgtgccatgatgtaaacatttgctaaagacagattaattaggtttaataaattcgtctcgcagtttcctagcggaattagagtagtaatttattttgttattagactaagtttaatacttcaaatgtgtgtccatatatccgatgtgacaaccaaatctaaaaattttcctcaactaaacaaggctccagaaaagaaatacaatatttagtgcagttgtgggttccgtgttttaaaaatttatgaaagaaaataaaaaaaatcatgcataaagtaatattcttgttttatcatctaataataataaaaatagtaagcataaaaaaattaaataagatgaacgatgaaatgttggataaaaattccacagctgtatttaaattgggacggatggaatactatagtcgtagtctagtagtacacagagtacttaccacagttggattgattactgcaggaagtttacgtcgtgaacagggagagcaccaagaccgcgcggctgccgcgggacaggtacccgaagccgctcatcttccacgacggccgcctcgccttcctcccgaccccctccgccgcgctcgctttcttcctcttcctccccctcggcgtcatcctctccgtcatccgcatctccatcggcatcctgctcccctacaagatcagcttcggggcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0631400, RefSeq:Os01g0631400